Solanum lycopersicum mRNA Solyc03g117950.2.1

mRNA details  
Name
Solyc03g117950.2.1
Type
mRNA
Length
3,423
Organism
Solanum lycopersicum
Description
Chaperone protein ClpB 1 (AHRD V1 **-- D0CK17_9SYNE); contains Interpro domain(s) IPR013093 ATPase associated with various cellular activities, AAA-2
Location(s)
SL2.50ch03:66924087..66930728
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0019538
  • GO:0005524
  • GO:0017111
  • GO:0016021
Length
6642
Nb exon
12
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g117950.2.1 Chaperone protein ClpB 1 (AHRD V1 **-- D0CK17_9SYNE); contains Interpro domain(s) IPR013093 ATPase associated with various cellular activities, AAA-2

CAGACTCTTTTGAACACAAATTTAACACATTTTCTCTCCTTTATTTTTCCACCAAAAAACTTGCCTTTAACGTGTTGTCTTCTCCAATCTCCGATTCCAACTTTTCCTCCAAAGAAATTTAACATAACTTTTCTTATATATATAAATTAATACACAGTTTGTATATCCTTATAAATAGTACTTCATCTTGCCTTTTGACTTTCCATTTCGTCATCTTCTTCTTTCTTTCTTTTTTTCTTGCTTTTTGTTTTTGATTTTTAGTTGAAATTTATATTTAGCTGTAGAATTTTGTGGGTGTTCTTCAATGGAGTTATCGTGTTCTTCTCCGCTTTCTGTCAACTCTACTATCAGTTTCAATCGATATGTTTCTGTGTACCCTCATAGGAGATGTCAAAGTGTTCTCTCCCTTTTTCCATATTATCCTTCTTCTTCTTCTCATGTTGCTACCACAGCTACTGCTTCTGCTCCTTGTAGTACTAGCAGTTCTAGTTCGACCCTTTTTGGGATTTCCCTTTCTCATCGACCCAGCAGTTCCGTTCATCGTAAAATCAAGCGTTCTATGTATATTGTGTCGGGGGTGTTCGAGAGATTTACTGAGAGATCGATTAAAGCTGTGATGTTCTCCCAGAAGGAAGCAAAGGCTTTGGGTAAAGATATGGTGAGCACCCAACACCTTTTACTTGGTCTTATCGCGGAGGATCGGAGTCCTGGTGGGTTTCTTGGTTCTCGAATAACTATTGATAAGGCCCGTGAAGCTGTTCGTAGCATATGGCTTGGTGACTCAGAGGACGATACAACAAAATTGGGTTCTCAGGACTCCAGTTCAGCTACCTCAGCTACTGATGTGGCCTTTTCTTCAAGTACCAAGCGGGTTTTTGAGGCTGCGGTTGAGTATTCAAGGACCATGGGGTATAATTATATTGCTCCTGAGCATATTGCTATTGGTTTGTTTACTGTTGATGATGGCAGCGCTGGTCGTGTGCTCAAGAGGTTAGGAGCAAATGTAAATCGTCTGGCAGCTGAGGCAGTTTCCAGGCTTCAAGGAGAGCTTGCTAAAGATGGTAGAGACCCAATTTCGTTCAAAAGATCACGTGAGAAATCCTTTCCTGGAAAAATAACTATTGACAGATCTGCTGAGAAAGCAAAAGAGAAAAACGCTCTGGAGCAATTTTGTGTAGATCTTACTGCCCGTGCAAGTGAGGGCCTTATAGACCCAGTAATTGGTAGGGAGACTGAAGTTCAGAGAATGATCGAGATACTCTGCCGTCGAACCAAAAACAATCCTATTCTGCTTGGTCAAGCTGGAGTTGGGAAAACAGCGATAGCTGAAGGGCTTGCTATAAACATTGCTGAAGGAAATATTCCTGCGTTCTTAATGAAAAAACGGGTAATGTCTTTAGACATTGGCCTATTGATTTCAGGTGCAAAGGAGAGGGGTGAACTAGAGGCGCGTGTGACTACATTAATTAAGGAGGTAAAAGAGTCAGGCCATATCATTCTATTCATAGATGAGGTCCACACCCTTGTTGGTGCTGGCACAGTTGGACGGGGAAATAAGGGCTCTGGTCTTGACATTGCTAATTTGCTAAAACCAACACTTGGCCGTGGTGAACTGCAGTGTATTGCATCTACCACCATGGATGAGTTCAGATTGCATATTGAGAAAGACAAGGCCTTTGCTCGAAGGTTCCAGCCCATCTTGGTTAATGAACCAAGTCAGGCGGATGCTGTCCAGATACTATTGGGGTTGCGTGAAAAATATGAGTCGCATCATAAGTGTAGGTACAGTCTGGAAGCCATCAATGCTGCTGTGGAACTATCATCAAGATATATACCGGATAGGTATCTTCCTGACAAAGCTATTGATCTTATTGATGAGGCTGGTAGTAAATCTCGTATGCAAGCTCACAAAAGAAGAAAGGAACAGCAGATATCTGTACTTTCACAATCACCTAGTGATTATTGGCAGGAAATTAGAGCTGTTCAAACCATGCATGAAGTGATCCTGGCTAGCAAGCTGACTGAAAATGCTGATGCGTCTCGTTTGGATGATGACAGTGAACTTCATTTGCAGCCAGCTTCGTCTTCTACATCTGATCAACATGAACTCCCATTAGTTGGACCTGAGGATATAGCAGCAGTTGCTTCACTCTGGACAGGCATTCCCCTTAAGCAGCTTACAGTTGATGAAAGAATGCTTTTGGTTGGTCTTGATGAGCAGCTTAAGAAAAGGGTTGTTGGTCAGGATGAGGCTGTTACATCTATTTGTCGGGCTGTTAAGAGATCCAGAACTGGCCTCAAGCACCCAAATAGACCAATTTCGGCAATGCTCTTCTGTGGTCCTACTGGAGTTGGAAAATCTGAACTGGCTAAAGCTTTGGCAGCATCTTATTTTGGATCTGAATCTGCCATGCTAAGATTGGATATGAGTGAATACATGGAGCGGCATACTGTGAGCAAGTTAATTGGATCGCCTCCTGGTTATGTAGGCTATGGAGAAGGAGGGACTCTAACTGAAGCTATCCGAAGAAAGCCCTTCACTGTAGTGCTGCTAGATGAGATTGAAAAGGCTCATCCCGACATATTCAATATTCTCCTTCAGTTGTTTGAAGATGGTCACCTAACAGACTCTCAGGGAAGAAGAGTGTCATTTAAGAACGCCTTGATAGTTATGACTTCAAATGTGGGTTCAACAGCCATTGTAAAGGGTAGACAGAATACTATCGGCTTCTTGCTTGCTGAAGATGAGTCAGCCGCCTCCTATGCTGGTATGAAAGCAATAGTGATGGAGGAGCTCAAAACATACTTTCGTCCAGAGTTACTGAATAGGATAGATGAAGTAGTGGTATTCCGTCCACTAGAGAAGCCTCAGATGCTCGAGATATTAAACCTGATGTTGCAGGAGGTAAGAGCTAGGCTTGTTTCATTAGGAATAAGTTTGGAGGTATCAGAAGCAGTAATGGACCTCATATGCCAACAAGGATTTGACAGAAACTATGGCGCACGCCCTCTGAGGAGGGCTGTTACTCAAATGGTTGAAGATCTCCTGTGTGAATCTGTACTTTCTGGGGATTTCAAGCCTGGTGATGTTGCTGTGATCCATTTAGATGAATCTGGAAATCCTGTCGTCGTTAACCAGTCAAGCCAGAGTATCCAATTGTCTGATACAAACGGAAATCCAGTAGTCACCAACAGGTGAAGCCAGCATATCCATTTATCTGATACATCTGTACTGTATTGTAAGGTAATAACAACACGATATAGCTCACTGTATATGAGTTAATTTTTTTGTATAGTTTTAGATATAGCCCATTCATACATGTAAAGACATGCCACAGAATTCTTTCAACAATGTATAAACTCTTATGATCATTGTATAATATTGTTGATCATGTATTTAACCTACACAATCTTTTCTACTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g117950.2.1SL2.50ch03:66924310..66930424965-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g117950.2SL2.50ch03:66924087..669307286,642-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g117950.2.1.1SL2.50ch03:66929739..66930728990-1
exonexon:Solyc03g117950.2.1.10SL2.50ch03:66925169..66925402234-n/a
exonexon:Solyc03g117950.2.1.11SL2.50ch03:66924815..66925051237-n/a
exonexon:Solyc03g117950.2.1.12SL2.50ch03:66924087..66924637551-n/a
exonexon:Solyc03g117950.2.1.2SL2.50ch03:66928999..66929156158-2
exonexon:Solyc03g117950.2.1.3SL2.50ch03:66928695..66928924230-n/a
exonexon:Solyc03g117950.2.1.4SL2.50ch03:66928443..66928551109-2
exonexon:Solyc03g117950.2.1.5SL2.50ch03:66928239..66928369131-n/a
exonexon:Solyc03g117950.2.1.6SL2.50ch03:66927632..66927733102-n/a
exonexon:Solyc03g117950.2.1.7SL2.50ch03:66927271..66927552282-n/a
exonexon:Solyc03g117950.2.1.8SL2.50ch03:66927065..66927168104-1
exonexon:Solyc03g117950.2.1.9SL2.50ch03:66926657..66926951295-n/a
intronintron:Solyc03g117950.2.1.10SL2.50ch03:66925403..66926656n/a-n/a
intronintron:Solyc03g117950.2.1.11SL2.50ch03:66925052..66925168n/a-n/a
intronintron:Solyc03g117950.2.1.12SL2.50ch03:66924638..66924814n/a-n/a
intronintron:Solyc03g117950.2.1.2SL2.50ch03:66929157..66929738n/a-n/a
intronintron:Solyc03g117950.2.1.3SL2.50ch03:66928925..66928998n/a-n/a
intronintron:Solyc03g117950.2.1.4SL2.50ch03:66928552..66928694n/a-n/a
intronintron:Solyc03g117950.2.1.5SL2.50ch03:66928370..66928442n/a-n/a
intronintron:Solyc03g117950.2.1.6SL2.50ch03:66927734..66928238n/a-n/a
intronintron:Solyc03g117950.2.1.7SL2.50ch03:66927553..66927631n/a-n/a
intronintron:Solyc03g117950.2.1.8SL2.50ch03:66927169..66927270n/a-n/a
intronintron:Solyc03g117950.2.1.9SL2.50ch03:66926952..66927064n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17776360%2Fdetails feature 17776360
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