Solanum lycopersicum mRNA Solyc03g117600.2.1

mRNA details  
Name
Solyc03g117600.2.1
Type
mRNA
Length
1,730
Organism
Solanum lycopersicum
Description
Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase (AHRD V1 **-* A4ZKI0_COFAR); contains Interpro domain(s) IPR003480 Transferase
Location(s)
SL2.50ch03:66715754..66721151
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016747
Length
5398
Nb exon
3
Sifter term
  • GO:0047205
  • GO:0047172
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g117600.2.1 Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase (AHRD V1 **-* A4ZKI0_COFAR); contains Interpro domain(s) IPR003480 Transferase

TGTGTTGATTTAGAGTATTTTCTCAACCCACTCTCAACCATATTATCACCCATAAAAAAGCTCAACAACATTATTCTGCTCCTTCTCTTTTTTTCAAAAGGAAACATAGTTTGATTGATCGACGATGAAGATCGAGGTGAAAAACTCAACGATGGTGCAGCCGGCGACGGAGACGCCGCAACTGAGGCTGTGGAACTCTAATGTGGATTTAGTAGTGCCTAATTTCCACACGCCTAGTGTTTATTTCTATAGGCCAACGGGATCCCCAAATTTTTTCGACGGGAAAGTGGTTAAGGAGGCACTAAGCAAAGCCCTAGTGCCGTTTTATCCGATGGCTGGGAGACTGTGCAGGGATGAAGATGGCCGTATTGAGATTGATTGTAAAGGTCAAGGTGTGCTGTTTGTGGAAGCTGAGTCCGACGGTGTGGTGGATGATTTTGGCGATTTTGCACCGACGTTGGAGCTCCGGCGACTTATTCCGGCCGTTGATTACTCACAAGGAATCGAATCGTATGCTCTCTTAGTATTGCAGATAACACAGTTTAAATGTGGGGGAGTTTCCCTTGGAGTGGGCATGCAACATCATGCAGCAGATGGAGCTTCTGGTCTTCACTTCATCAACACATGGTCCGACATGGCTCGTGGTTTAGACCTAACTATCCCACCTTTCATTGATCGTACCCTCCTCCGTGCTCGTGATCCACCTCAGCCTCAATTCCCCCACGTCGAGTACCAGCCACCTCCCACTCTCAAGACAACAGAAGAAAATGTGCCCAATGCAGAAACTGTTCCTGAAACGAGTGTGTCAATCTTCAAACTAACCCGGGATCAAATCAATACCCTCAAAGCTAAGTCCAAAGAAGATGGAAATACTGTAAACTACAGCTCATATGAGATGTTGGCAGGGCATGTGTGGCGCTCCACTTGTATGGCACGAGGACTCACTCAGGATCAAGAAACCAAGTTGTACATAGCAACTGATGGGCGTGCCAGGCTCCGACCTTCTCTTCCACCAGGCTATTTTGGTAATGTGATATTCACTGCCACTCCTGTTGCTGTTGCTGGTGATCTCCAATCAAAGCCTATTTGGTATGCAGCCAGTAAAATCCATGATCAATTGGCTATAATGGACAACGATTACTTGAGATCAGCTCTTGATTATTTGGAATTACAGCCTGACTTGAAGGCTCTAGTCCGCGGTGCACATACATTTAAGTGCCCGAATTTAGGAATAACTAGTTGGTCTAGGCTGCCTATCCATGATGCTGATTTTGGATGGGGTAGGCCAATATTTATGGGACCTGGTGGTATCGCTTATGAAGGGTTAAGCTTTATATTGCCAAGTCCCATCAATGATGGCAGTCAATCAGTTGCCATCTCTCTGCAAGCAGAACATATGAAACTTTTTGAGAAGTTCTTGTATGACATTTGAAAGAAGCCGCTTTCTTGTGCTGCTTTGATTGGGATTTACAATCACGGATATGTAAAAGAGACTCCCTTTTATCTTTTTTTTTTTTTTCATTAGAGTTTCTTCTTTGTTTGCCTGGACATCAGTTTTATTTCTGATTCTATGATGCATTGATTATATACTCAAAGTTACACTGCTAGTGTTACATGTCTGTGAAGGACCTCAATCTTTTTCACTTCCACAAATGTGGCAAGATGTTAACTCAGAAGCTCCTAGTAATTATTGTAGTAGTACATATCTTTTATTTGCTAATATTCCTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g117600.2.1SL2.50ch03:66716025..66720853436+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g117600.2SL2.50ch03:66715754..667211515,398+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g117600.2.1.1SL2.50ch03:66715754..66715853100+n/a
exonexon:Solyc03g117600.2.1.2SL2.50ch03:66716002..66716433432+n/a
exonexon:Solyc03g117600.2.1.3SL2.50ch03:66719954..667211511,198+n/a
intronintron:Solyc03g117600.2.1.1SL2.50ch03:66715854..66716001n/a+n/a
intronintron:Solyc03g117600.2.1.2SL2.50ch03:66716434..66719953n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17775961%2Fdetails feature 17775961
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