Solanum lycopersicum mRNA Solyc03g115900.2.1
![]() |
Name | Type |
Length
1,191
|
Organism |
Description
Chlorophyll a-b binding protein P4, chloroplastic (AHRD V1 ***- CB24_PEA); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
|
Location(s)
SL2.50ch03:65491499..65493138
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0016020
- Length
- 1640
![]() | spliced mRNA sequence, including UTRs |
>Solyc03g115900.2.1 Chlorophyll a-b binding protein P4, chloroplastic (AHRD V1 ***- CB24_PEA); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
TGAAGATATAGAAGCAAAGATAAGAGATAAGGCACATTTCTTCTCATTGGTTCTTATCAAATTCACAACTCAATCCAACCGTTGGATTCCAAAAAATCTTAGTGACTCTTCAAGATTGAACCAGAGCCACAATTGTCCCAAAGAAATGGCAATACAAATGCATATACAAAACATACAAAGTTTTCAACTCAGCCTTAAAACTACATTGCCATTTCTCCCAATAATCACCAACAAACTCTTCAAATTGGAAAAAATGGCAACCGTGACAACACAAGCTTCCGCCGCCATTTTCCGGCCGTGTGCTTCAAGAACCAGGTTCCTTACTGGATCATCTGGAAAGTTAAACAGGGAGGTCTCTTTTAGACCTTCAACTTTTTCGTCTTACAACTCATTCAAGGTTGAAGCTAAGAAAGGTCAATGGCTTCCTGGCTTAGCCTCTCCTGATTATCTTGATGGCAGTCTCCCAGGAGACAATGGTTTTGATCCATTGGGACTTGCGGAGGACCCAGAGAACTTGAAATGGTTCATCCAGGCTGAACTGGTGAATGGTCGTTGGGCTATGTTGGGTGTTGCAGGGATGCTGTTGCCTGAAGTTTTCACTAGCATTGGGATACTTAATGTGCCCAAATGGTACGATGCTGGAAAATCAGAGTACTTTGCATCATCATCCACCCTGTTTGTGATCGAGTTCATCTTGTTCCACTACGTCGAGATCAGAAGGTGGCAAGACATTAAGAACCCAGGAAGTGTCAACCAAGACCCTATCTTCAAGAACTACAGCTTGCCTCCTAATAAATGTGGATACCCTGGTGGTATTTTCAACCCACTCAACTTTGCACCAACTGAAGAGGCCAAGGAGAAGGAACTTGCTAATGGGAGATTGGCTATGTTGGCATTTTTGGGATTTATAGTGCAGCACAATGTGACTGGGAAGGGACCTTTTGACAACCTTCTGCAGCACCTCTCTGACCCATGGCACAACACCATCATCCAAACACTCAGCAACTAGAAAACCATCATCAGAAACTTAATTGAATATATATTGTTACCTTGTAACCATGTTATGAATTTTGATCAAGAATAGAGCTTTGTGGTAAAACAAGGAACCTTCCTTTAATGTACAGCGTTTCTTATTCGTGTTATTCCTACTAGATCATCAAAAGAATGTGATTTTGCGCTCTTGTTAGAAAG
TGAAGATATAGAAGCAAAGATAAGAGATAAGGCACATTTCTTCTCATTGGTTCTTATCAAATTCACAACTCAATCCAACCGTTGGATTCCAAAAAATCTTAGTGACTCTTCAAGATTGAACCAGAGCCACAATTGTCCCAAAGAAATGGCAATACAAATGCATATACAAAACATACAAAGTTTTCAACTCAGCCTTAAAACTACATTGCCATTTCTCCCAATAATCACCAACAAACTCTTCAAATTGGAAAAAATGGCAACCGTGACAACACAAGCTTCCGCCGCCATTTTCCGGCCGTGTGCTTCAAGAACCAGGTTCCTTACTGGATCATCTGGAAAGTTAAACAGGGAGGTCTCTTTTAGACCTTCAACTTTTTCGTCTTACAACTCATTCAAGGTTGAAGCTAAGAAAGGTCAATGGCTTCCTGGCTTAGCCTCTCCTGATTATCTTGATGGCAGTCTCCCAGGAGACAATGGTTTTGATCCATTGGGACTTGCGGAGGACCCAGAGAACTTGAAATGGTTCATCCAGGCTGAACTGGTGAATGGTCGTTGGGCTATGTTGGGTGTTGCAGGGATGCTGTTGCCTGAAGTTTTCACTAGCATTGGGATACTTAATGTGCCCAAATGGTACGATGCTGGAAAATCAGAGTACTTTGCATCATCATCCACCCTGTTTGTGATCGAGTTCATCTTGTTCCACTACGTCGAGATCAGAAGGTGGCAAGACATTAAGAACCCAGGAAGTGTCAACCAAGACCCTATCTTCAAGAACTACAGCTTGCCTCCTAATAAATGTGGATACCCTGGTGGTATTTTCAACCCACTCAACTTTGCACCAACTGAAGAGGCCAAGGAGAAGGAACTTGCTAATGGGAGATTGGCTATGTTGGCATTTTTGGGATTTATAGTGCAGCACAATGTGACTGGGAAGGGACCTTTTGACAACCTTCTGCAGCACCTCTCTGACCCATGGCACAACACCATCATCCAAACACTCAGCAACTAGAAAACCATCATCAGAAACTTAATTGAATATATATTGTTACCTTGTAACCATGTTATGAATTTTGATCAAGAATAGAGCTTTGTGGTAAAACAAGGAACCTTCCTTTAATGTACAGCGTTTCTTATTCGTGTTATTCCTACTAGATCATCAAAAGAATGTGATTTTGCGCTCTTGTTAGAAAG
![]() |
unprocessed genomic sequence underlying each location of this mRNA |
![]() |
Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc03g115900.2.1 | SL2.50ch03:65491751..65492659 | 252 | + | n/a |
Add items to a list:
Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc03g115900.2 | SL2.50ch03:65491499..65493138 | 1,640 | + | n/a |
Add items to a list:
Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc03g115900.2.1.1 | SL2.50ch03:65491499..65491957 | 459 | + | n/a |
exon | exon:Solyc03g115900.2.1.2 | SL2.50ch03:65492033..65492448 | 416 | + | n/a |
exon | exon:Solyc03g115900.2.1.3 | SL2.50ch03:65492526..65492836 | 311 | + | 1 |
exon | exon:Solyc03g115900.2.1.4 | SL2.50ch03:65493134..65493138 | 5 | + | 2 |
intron | intron:Solyc03g115900.2.1.1 | SL2.50ch03:65491958..65492032 | n/a | + | n/a |
intron | intron:Solyc03g115900.2.1.2 | SL2.50ch03:65492449..65492525 | n/a | + | n/a |
intron | intron:Solyc03g115900.2.1.3 | SL2.50ch03:65492837..65493133 | n/a | + | n/a |
Add items to a list:
Related views |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)