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Solanum lycopersicum mRNA Solyc03g115890.2.1

mRNA details  
Name
Solyc03g115890.2.1
Type
mRNA
Length
767
Organism
Solanum lycopersicum
Description
Expansin (AHRD V1 ***- Q9FVG9_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal
Location(s)
SL2.50ch03:65487663..65489151
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005576
  • GO:0009664
Length
1489
Nb exon
3
Sifter term
GO:0005199
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g115890.2.1 Expansin (AHRD V1 ***- Q9FVG9_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal

ATGTCAATTTTGTGGTTCTCCATAATTGGTGTGTTTTGTATACAATTTATTAATTGTGTCCATGGAAATGAACAAGGATGGATTGAAGCTCATGCAACTTTCTATGGAGGTGGTGATGCTTCCGGAACTATGGGTGGAGCATGTGGTTATGGGAATTTGTACAGTGAAGGATATGGTACAAACACAGCAGCATTGAGTACAGCACTGTTCAATAATGGTTTGAGTTGTGGATCTTGCTTTGAGCTTAAATGTGTGGGTGATTCGAAGTGGTGCCTTCCAGGCTCTATAGTGGTAACTGCTACTAATTTTTGCCCACCAAATTTTGCCCTTCCGAATAACGCTGGTGGGTGGTGCAATCCTCCATTGCACCACTTTGACCTGGCTCAGCCTGTTTTTCAAAAAATGGCTCAGTACAGAGCTGGGATTGTCCCTGTTGCTTACAGAAGAGTACCTTGCCAGAGAAAAGGCGGAATGAGATTCACAATGAACGGTCACTCCTATTTCAATTTAGTGCTGGTGACGAACGTGGGAGGTTCAGGAGATGTAAATGCAGTTTCGATTAAAGGTTCTAGAACAGGGTGGATAGCAATGTCACGCAATTGGGGTCAAAATTGGCAGAGCAATGCATTACTTGATGGTCAAATTCTATCATTTAAAGTAACTACAGGTGATGGCCGCACTGTTTTCTGCAACAATGCTATCCCTGCTGGATGGTCATTTGGGAAAACTTACACAGGCGCACAGTTTACTTGATTCCTTCAATTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g115890.2.1SL2.50ch03:65487662..65489137251+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g115890.2SL2.50ch03:65487663..654891511,489+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g115890.2.1.1SL2.50ch03:65487663..65487795133+n/a
exonexon:Solyc03g115890.2.1.2SL2.50ch03:65487907..65488219313+2
exonexon:Solyc03g115890.2.1.3SL2.50ch03:65488831..65489151321+1
intronintron:Solyc03g115890.2.1.1SL2.50ch03:65487796..65487906n/a+n/a
intronintron:Solyc03g115890.2.1.2SL2.50ch03:65488220..65488830n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17774206%2Fdetails feature 17774206
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