Solanum lycopersicum mRNA Solyc03g115720.2.1

mRNA details  
Name
Solyc03g115720.2.1
Type
mRNA
Length
1,929
Organism
Solanum lycopersicum
Description
ATP-dependent protease La (LON) domain (AHRD V1 *--- A3YXA7_9SYNE); contains Interpro domain(s) IPR003111 Peptidase S16, lon N-terminal
Location(s)
SL2.50ch03:65349143..65358148
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0005488
  • GO:0008270
Length
9006
Nb exon
19
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g115720.2.1 ATP-dependent protease La (LON) domain (AHRD V1 *--- A3YXA7_9SYNE); contains Interpro domain(s) IPR003111 Peptidase S16, lon N-terminal

AAGGGCATTTATTCTTGAGAACGAAAGCTCTCGCAATAATTCCAAAGTTATGGATTGAAAAAGTTTTACACTTTCTAGAGAGAGAGAGGGGATCTGCAGTACAGTGCAGAGTACACAGAGAGAGAAGGACCACGTAGACGAATACAGTCCATCTCTGTGTTCTTGCAATGTCCGGCGAGGCTTCTTCGTCTGGGTTTAATCTTGAAGGAATTGATGATGTTCAAGATTTTCCATGGGCGAATTCAGGAGAGACGCCATCTATATCGTGGGACAGGTACAGTCATCTATGTGAGACTATGGAGATGGGTAACAAAGCATATCGTGAGAACAGATGGGACGAGGCAATCAATCGTTACACAAGAGCTAGCAACATTAAGCCGGATGATCCTATTATTCTTAGCAACAGATGCGCTTCATACCTCAGGTATAGCCAATTTCTGAAAAGTAGATCTGCATCAGATTCAGAATACAGGCCATTGAGTGGGTTGGATCCAACAACATATGCTGGGCTTGCACTAAAGGATGCCGAGAAGGTGATGCATCTGCAGAACAATTCAGTTACCTCATATATTCTGAAGGCAAACTCACTCATTTTGTTAGAAAAATATGAGCTCGCCCAAGAGATAATCCGTTCAGGACTTCAAATAAATCCTCAAAGCAATCCCCTTCTAAATTTGGAGAAATCGATCAAAACTACACTTGGAAGGAGAACCCACGGGAGACCACAGCGCAGTGATGAATTTGACTGCACCCTGTGCTTAAAGTTATTATATGAACCTATAACAACTCCCTGTGGACATTCTTTTTGCCGTGCATGCCTTTTCCAGTCGATGGACCGATATAACAGATGTCCATTGTGCCGAACAGTTCTTTTCATTAGTCCCAGAACGTGTGCAATCAGTGTAACGTTGAAAAACATAATAGAAAAAACTTTTCCTGAGGAATATGCTGAAAGGAAGGCTGAGAATGACAGTTTGATAAACCTCGGTGTTGACTTGCTGCCCCTTTTCGTCATGGACGTTATTCTACCATGCGAGAAGCTTGCACTCAACATTTTTGAACCGCGTTACAGACTTATGATCAGAAGGATAATGGAAGGAAATCGCCGAATGGGAATGGCTGTTCATGATTCTACGACAGGTTCGGTTGCTGATTATGCTTGTGAAGTGGAGATTATAGAGTGTGAGCCACTTCCAGATGGGCGTTTCTTTTTGGAGGTTGAAAGTCGACGTAGATGTCGCATCATACGACATTGGGATCAAGATGGGTATCGTGTTGCTGAGGTTGAATGGATACATGATATATGCCCTGCTGAAGGAACAAGAGAGAGGCATGAATTACTGGAGATGGCAAATAAGGCGGCGGCATTCGCTCAACAATGGTTGAGGAACGCACAACAAGTAGCAGGAGATCGTAGAAGTGCAGAACTCTTCAAAGCTGAAGGATTGATGCCATCACCACAGGATCCTGAGCGCTTAAGTTTTTGGCTTAACACTCTGACCGCTCGTAGACCAACAGAGAAGTTAGACCTGCTTCAAATAAGAGATACACCTGAGAGGATAAGGAGAGGTCTGCTATACATGAAACAAGAAGAACAAGGTTGCCGGCTGCAATGATATTTATTGAACATGTAATTAGTTCCTTTTACATGAAAGCAGAAGAAGGCTGCCAGCTGATATAATTTTATGGTAAACCTGTAATTAGTTCCATTGTTTGTAATACCATTGGTTTTTCTGTAAAGCTCATTTTGATTTCAATTTTTTTTTGAATCCACATTTCTAGTACTGGTGGATCCTCAACTCAATTTTCCTCCTTCATAGAGATTTATCGTAAAAGCCTGCACTGTTATTTAAACTAGATTATTCATTTGTTGTAAACAGTGGGTTGGGTCTACCCCGCAATACATATAAGTAAAAACCAAAAGGACGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g115720.2.1SL2.50ch03:65349455..65357545440-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g115720.2SL2.50ch03:65349143..653581489,006-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g115720.2.1.1SL2.50ch03:65357997..65358148152-n/a
exonexon:Solyc03g115720.2.1.10SL2.50ch03:65354026..65354203178-n/a
exonexon:Solyc03g115720.2.1.11SL2.50ch03:65352815..6535285339-n/a
exonexon:Solyc03g115720.2.1.12SL2.50ch03:65352663..6535272462-1
exonexon:Solyc03g115720.2.1.13SL2.50ch03:65352511..6535254737-n/a
exonexon:Solyc03g115720.2.1.14SL2.50ch03:65352027..6535207650-1
exonexon:Solyc03g115720.2.1.15SL2.50ch03:65351394..6535146370-n/a
exonexon:Solyc03g115720.2.1.16SL2.50ch03:65350949..6535102173-2
exonexon:Solyc03g115720.2.1.17SL2.50ch03:65350429..6535050577-n/a
exonexon:Solyc03g115720.2.1.18SL2.50ch03:65350274..6535034269-n/a
exonexon:Solyc03g115720.2.1.19SL2.50ch03:65349143..65349515373-n/a
exonexon:Solyc03g115720.2.1.2SL2.50ch03:65357799..6535788284-n/a
exonexon:Solyc03g115720.2.1.3SL2.50ch03:65357501..65357605105-n/a
exonexon:Solyc03g115720.2.1.4SL2.50ch03:65355948..6535603083-1
exonexon:Solyc03g115720.2.1.5SL2.50ch03:65355701..6535578585-n/a
exonexon:Solyc03g115720.2.1.6SL2.50ch03:65355537..6535562387-n/a
exonexon:Solyc03g115720.2.1.7SL2.50ch03:65355067..6535512862-1
exonexon:Solyc03g115720.2.1.8SL2.50ch03:65354737..65354918182-2
exonexon:Solyc03g115720.2.1.9SL2.50ch03:65354557..6535461761-1
intronintron:Solyc03g115720.2.1.10SL2.50ch03:65354204..65354556n/a-n/a
intronintron:Solyc03g115720.2.1.11SL2.50ch03:65352854..65354025n/a-n/a
intronintron:Solyc03g115720.2.1.12SL2.50ch03:65352725..65352814n/a-n/a
intronintron:Solyc03g115720.2.1.13SL2.50ch03:65352548..65352662n/a-n/a
intronintron:Solyc03g115720.2.1.14SL2.50ch03:65352077..65352510n/a-n/a
intronintron:Solyc03g115720.2.1.15SL2.50ch03:65351464..65352026n/a-n/a
intronintron:Solyc03g115720.2.1.16SL2.50ch03:65351022..65351393n/a-n/a
intronintron:Solyc03g115720.2.1.17SL2.50ch03:65350506..65350948n/a-n/a
intronintron:Solyc03g115720.2.1.18SL2.50ch03:65350343..65350428n/a-n/a
intronintron:Solyc03g115720.2.1.19SL2.50ch03:65349516..65350273n/a-n/a
intronintron:Solyc03g115720.2.1.2SL2.50ch03:65357883..65357996n/a-n/a
intronintron:Solyc03g115720.2.1.3SL2.50ch03:65357606..65357798n/a-n/a
intronintron:Solyc03g115720.2.1.4SL2.50ch03:65356031..65357500n/a-n/a
intronintron:Solyc03g115720.2.1.5SL2.50ch03:65355786..65355947n/a-n/a
intronintron:Solyc03g115720.2.1.6SL2.50ch03:65355624..65355700n/a-n/a
intronintron:Solyc03g115720.2.1.7SL2.50ch03:65355129..65355536n/a-n/a
intronintron:Solyc03g115720.2.1.8SL2.50ch03:65354919..65355066n/a-n/a
intronintron:Solyc03g115720.2.1.9SL2.50ch03:65354618..65354736n/a-n/a
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