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Solanum lycopersicum mRNA Solyc03g114850.2.1

mRNA details  
Name
Solyc03g114850.2.1
Type
mRNA
Length
2,211
Organism
Solanum lycopersicum
Description
Squamosa promoter binding protein 3 (AHRD V1 *-*- Q1MU26_PHYPA); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
Location(s)
SL2.50ch03:64743705..64749187
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
5483
Nb exon
4
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g114850.2.1 Squamosa promoter binding protein 3 (AHRD V1 *-*- Q1MU26_PHYPA); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box

CCATTTTGTTTTCTTTTTAGTATTAGTGTTTGAGTTTGGACCACTTCTTTTTTGCTTTCACCCAACTGTACTACTTTTTTCTTGCTAATACTATCTCTGTGCTTCCACTAAGGAGGCAAGTATTTTACTTGTCTACTCCTCTTCTTCAGTGCTCCTTGATTGCAAACACTTATTATGGACTTATGAGTTGTCCCTTTTTTTTTCTTTTGTAAATGACTGGGTTTTTGAATTGCTAATTTATATCTGGTTGTGTGTTATGGAGGAAGACTAAAACACTAGTACATTTTTGGGTGTTAATAGGGTTTAAAAAAAAATGGAGTCATGGAGCTATTTTTCAGGGGGGAAGGGTTTTGTATCAGAGGAATCAGTTTCTGTTAATGATGGAATGAGGAGAGTGAAAAATGGAGTTATGGGTTGGGAATTGAAGACCCAAAGTAGCTATGGAATGTGTACAACTGATAATCAAGGATTTCATGAGTTGGGTTCTCCAAATCTGATGAGAAAACCTATGTTTACTGACCAAATGAGAGATGGCTTTGCTAGTAGTAAGCACTGGGGTGGAGGTGGTGGGAGTATAGTTGGTGCATTTTCTGGGGAAGATAAATCTAGTTCTAAACTATCAAGCTCAGCTGTGGATTCAATTTCCAGAGACTCATCACTGATTGATTTGAAACTTGGAAGATTTCCTGATCATCATGTAGATGGAAATATTTTCAAATCTGCCAAGACTTTGTCAAGCTCTACTTCTGCTGAGTCAATTCTTCCTGCTAAAAGAATGAGAGCAGGAGGTTTGAACTCCCACAAACCATTTTGCCAGGTTCAAGGTTGTGGCAAGGATCTCAGCCCCTGTAAGGACTATCACAAGAGGCATAAAGTGTGCGAGGTTCACTCAAAGACTGCTAAAGTTATCGTAAATGGCATCGAGCAGCGGTTTTGCCAGCAATGTAGCAGGTTCCATCTACTGGCTGAGTTTGATGATGGCAAACGTAGCTGCAGGAAACGTCTTGCTGGTCATAATGAGCGGCGAAGGAAGCCCCCTCATACTGGTATGTACCAGATTTCGTGGAACTTCTTTTGCAACGTCACCCTTTGCATGCCAAGACATACTTAGTAGCCGCTATCTGCATCAGCCTAAATATGAGATGAGTGACTGGTGTAAGAATGTAAAAGTTGAAGATGGTGTTGATTATAGCCCTCAACTTGCCATGCCCTTTACAAATGGACAGTTACAACCAAAATCTCATTTTACATCATATCATGCCAAGAAAGGGTGTCATTCTTTCCATGATGGACTACCTGCTGTAACAACAAGCAGAATTAACGAGAGTACCAACTCATCTCTGCATGATATGCGAGGATCAGATTTTGTTTCCCCTTCTCTGTTCCACACCACCTCAACTGGTTCTGAAGTCTTGCATGCATTGGACACATCTTCCATTCAGGGGCTATCAGGGATATCAAATTCCAGCAATGCTCTCTCTCTTCTGTCATCTCAATCACAGGGATCGTCAAATCATTCCACTGTTTTTTCCACTTCTCGCCCCCTCATTCAACCAAACAATAATTACAATGTGACTCAAGCATCTAAAAATGTTCTGGGACTTGGTCCTCAGGCTTCGGCAGGTAGAATGTCCAATACATTCAATTCATCTGGGATCAATTCTGCAGAAGGTGGACTGGACCAGATGATATTTCCTAACAACACTTGTGGTATCAATCGTGTCATTCAAGGATCAGATTTGGTGAACTCTAAGAATCAACTTTCTTGTGAAGATGGACCTACTATTGATTTGCTCCAGTTGTCATCACAACTTCAGCGTGTGGAGCACCAAAGGTTTTCCGTTCAAGTGAAGCAAGACGGCAATGCTTTTCCCGGTCTCAGAATCACTTGAGCAGATGCAAATGTCTGGATTAAATTCATAATCGGTGGGCGTTGAACTGCTGTAGTGTGCAGCAACTCAATCAAGAAGCACACACCTTTCGCAGCTTTACAGAGGTGGAAGTATCAGGGAGTAAGTTTTTGGAATCTTGATGTTCACTGCTTGTTTGCTCCTTTTTTGTTTTTATTTTCCTCATGGTGCTGTCTCATTCAATAATAATGTTTTTTCTTTCTCTTTGACAATTGACAATAATCATGACTTGTAAGTCTCAGTTAATCTGTGTAGTACTAAATATGCACCCTTTTTTATGGAATAGATGCTCAAGTGTTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g114850.2.1SL2.50ch03:64744017..64747929266+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g114850.2SL2.50ch03:64743705..647491875,483+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g114850.2.1.1SL2.50ch03:64743705..64744655951+n/a
exonexon:Solyc03g114850.2.1.2SL2.50ch03:64744867..6474496599+n/a
exonexon:Solyc03g114850.2.1.3SL2.50ch03:64747869..64748714846+1
exonexon:Solyc03g114850.2.1.4SL2.50ch03:64748873..64749187315+1
intronintron:Solyc03g114850.2.1.1SL2.50ch03:64744656..64744866n/a+n/a
intronintron:Solyc03g114850.2.1.2SL2.50ch03:64744966..64747868n/a+n/a
intronintron:Solyc03g114850.2.1.3SL2.50ch03:64748715..64748872n/a+n/a
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Related viewsNone found
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