Solanum lycopersicum mRNA Solyc03g114510.2.1
mRNA details
|
| Name | Type |
Length
1,126
|
Organism |
| Description |
|
Location(s)
SL2.50ch03:64489836..64494877
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0055114
- Length
- 5042
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g114510.2.1 Cupin RmlC-type (AHRD V1 **-- Q2HVC5_MEDTR); contains Interpro domain(s) IPR012864 Protein of unknown function DUF1637
CTAATAAGCTGCTGATATTTTCATCTAACCCGATAATCCGGAAACTGGTAATGTTTGTGCAAAGAATTCGAGGGCTCTTCACGATGACGAAGAAGAGTCCTTGTTCCATTCAAGCTTTATTCGACCTTTGTAAGCAGACTTTTGCGCCTTCTGCAACTTCATCACCTTCTTCTCAAGCTATCCACAAGCTTTATTCGCTTTTGGATACGATTGGTCCTGAAGATGTTGGACTGAAAGATGAAAGCCGAGAGGATGAAAGAGGTCATGGTCTTTTTGGACTCAATGTCTTCAACAGGGTGGATCGCTGGGCTCAACCGATTACATATGTGGATATACACGAGGGTCAAAACTTTACTATGTGCATGTTTTGTTTCCCAACTTCTGCTGTCATTCCATTGCATGACCATCCTGGAATGACTGTTTTGAGCAAAGTCCTCTATGGATCCTTGCACGTGAAAGCTTATGATTGGGTTGAGCCAGCTTGCATCAGGAAAAGTGAACGTGCTGGTCATCCTACAGTGAGACTGGCTAGGTTGGCGGTTGATAAGGTCGTAAGTGCACCACATGGTACATCGGTTTTGCATCCCAAGAGTGGAGGGAATCTGCACTGTTTTACTGCCGTTACACCTTGTGCAGTTCTTGACATTCTTGCTCCTCCTTATCTTGAAGCAGCTGGCAGAAGATGTACCTACTACCATGATTATCCTTATTCCAGCTTTGCACATGGAGATGAAATTGTTGATAATGGAAAGGAACAAGAATATGCATGGCTTGCTGTGGTTGATACCCCAGAGGATCTGTACATGCGCCCAGGAAGGTACATGGGTCCAGACATCCAGAGGTAGCAATATACGTTTTCCTGCATTTGCTTAAGTATGGAGTGTGGATGTTCATGGAGCCCTTTTACTGTGAGCCTACCCAAGATTGACCTATAAATGATGCTTAACTGATGTGTATCTTTTTTTTTCTTCATAATCTTCAAGAAGGCTGTTGATCATGTTGTTAGAATCATGAAAATGCTACAGTATTATATTGTAGTCAAGTCTTTGGCATTGTATATTGGAGTTTGTATTAGTTCCCGCACTGGGTATGTTGTTGTATCAGTTCCATATGATCCATCATCTGC
CTAATAAGCTGCTGATATTTTCATCTAACCCGATAATCCGGAAACTGGTAATGTTTGTGCAAAGAATTCGAGGGCTCTTCACGATGACGAAGAAGAGTCCTTGTTCCATTCAAGCTTTATTCGACCTTTGTAAGCAGACTTTTGCGCCTTCTGCAACTTCATCACCTTCTTCTCAAGCTATCCACAAGCTTTATTCGCTTTTGGATACGATTGGTCCTGAAGATGTTGGACTGAAAGATGAAAGCCGAGAGGATGAAAGAGGTCATGGTCTTTTTGGACTCAATGTCTTCAACAGGGTGGATCGCTGGGCTCAACCGATTACATATGTGGATATACACGAGGGTCAAAACTTTACTATGTGCATGTTTTGTTTCCCAACTTCTGCTGTCATTCCATTGCATGACCATCCTGGAATGACTGTTTTGAGCAAAGTCCTCTATGGATCCTTGCACGTGAAAGCTTATGATTGGGTTGAGCCAGCTTGCATCAGGAAAAGTGAACGTGCTGGTCATCCTACAGTGAGACTGGCTAGGTTGGCGGTTGATAAGGTCGTAAGTGCACCACATGGTACATCGGTTTTGCATCCCAAGAGTGGAGGGAATCTGCACTGTTTTACTGCCGTTACACCTTGTGCAGTTCTTGACATTCTTGCTCCTCCTTATCTTGAAGCAGCTGGCAGAAGATGTACCTACTACCATGATTATCCTTATTCCAGCTTTGCACATGGAGATGAAATTGTTGATAATGGAAAGGAACAAGAATATGCATGGCTTGCTGTGGTTGATACCCCAGAGGATCTGTACATGCGCCCAGGAAGGTACATGGGTCCAGACATCCAGAGGTAGCAATATACGTTTTCCTGCATTTGCTTAAGTATGGAGTGTGGATGTTCATGGAGCCCTTTTACTGTGAGCCTACCCAAGATTGACCTATAAATGATGCTTAACTGATGTGTATCTTTTTTTTTCTTCATAATCTTCAAGAAGGCTGTTGATCATGTTGTTAGAATCATGAAAATGCTACAGTATTATATTGTAGTCAAGTCTTTGGCATTGTATATTGGAGTTTGTATTAGTTCCCGCACTGGGTATGTTGTTGTATCAGTTCCATATGATCCATCATCTGC
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g114510.2.1 | SL2.50ch03:64490116..64494794 | 254 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g114510.2 | SL2.50ch03:64489836..64494877 | 5,042 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g114510.2.1.1 | SL2.50ch03:64494674..64494877 | 204 | - | 2 |
| exon | exon:Solyc03g114510.2.1.2 | SL2.50ch03:64493997..64494148 | 152 | - | n/a |
| exon | exon:Solyc03g114510.2.1.3 | SL2.50ch03:64493365..64493527 | 163 | - | 2 |
| exon | exon:Solyc03g114510.2.1.4 | SL2.50ch03:64490372..64490572 | 201 | - | 2 |
| exon | exon:Solyc03g114510.2.1.5 | SL2.50ch03:64489836..64490241 | 406 | - | n/a |
| intron | intron:Solyc03g114510.2.1.2 | SL2.50ch03:64494149..64494673 | n/a | - | n/a |
| intron | intron:Solyc03g114510.2.1.3 | SL2.50ch03:64493528..64493996 | n/a | - | n/a |
| intron | intron:Solyc03g114510.2.1.4 | SL2.50ch03:64490573..64493364 | n/a | - | n/a |
| intron | intron:Solyc03g114510.2.1.5 | SL2.50ch03:64490242..64490371 | n/a | - | n/a |
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mRNA details
mRNA details

