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Solanum lycopersicum mRNA Solyc03g111760.2.1

mRNA details  
Name
Solyc03g111760.2.1
Type
mRNA
Length
3,080
Organism
Solanum lycopersicum
Description
Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch03:62394005..62399968
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
5964
Nb exon
22
Sifter term
  • GO:0035197
  • GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g111760.2.1 Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

GTATGCTAATGATGATAAAATTTCGAAGTTAAGGATGTCTTTTGACCAAGTAGAGAGGTCTAGGAGGAGCGTGGAATTCTTTGAGAAGCCTCGAAGAAGCATCGACCAGCAAATGGAAAAAGCGCGAAAAAGTGTGGACTGGCTAGATAGAATAAGAGCTGGTTGATATATTTGTAAATTTCATGTTCAAGTCAATTGTGGGGGAGTATAATAGTGCAACAACTTAACAATTAATTTATGGTTATCGGGTGTGATTTAGTTAATGTTCAACGGAGCCTATCTGTTTCTTTTCTTCTTTGTGCTTCTTCTTTCTGTTATGAAAAGAACAAATGAGAAATATAGTTTGGCGTCTCATTACAGTTTTGAGTTTGATCAAGAAGCAGTCAATGGTGTCTAAGGAGTTATTCCCATATTTGCCAAACTTTAATCAGATGAACAGACCTCGTCCGGGGGTCAAGGGAAAGAAGATACGTCTGCTGACAAATTATTTTAGAGTATGCTTTCAAGGTGGCATAAGCCAACTATATTCATACAATGTTAATATCCTATATGAAAATGGGGACCCTGTAACTGGAAGCAACTTAATTAGAAAAGTGATTCATAAACTCTGGGAGATATACAGCTCTGAGTTAGGAGAGCAAGTATTTGCTTCTGATGGGCAACAGAGCTTGTTCACAACTAGTCTTTTACCACAGCAGAAGCTAGATTTCACAGTTGTACTTGATGCTGCAACATCAAAAAGGTGGAAGACGGATGGCAACCTTAGTGGCGATGGAGAATTAAGTGAGGGTGATCAAAAGAGGCAGAAGATTATATCCCGATTCAAAACTTTCAGAATACAGATAAACTTTGTTTCCATCATCCCCTTTAAGACAATGCCTGATGGAAAGCATGGAGTAAAATCAAGAAACAATGAAGTTCTGATAGCATTAGACACCATTTTGCAACACTCTAATGCAAAAAGGTGCATACTGCATACTGATCCACAAAAGAACAGCCTTCTGCTCCGCCAATCGTACTTCCCCAACGAGATGAAGAACTTCATGGACTTGACTGGTGGTATCCTTGGATGCCGAGGTTTTCATTCGAGTTTCCAATCTGTTCAAGGTGGATTGTATTTCAACCTTGATACATCTACTACAACACTTATACAGCCAGGTCCACTAGTTAACTTTTTAATGGCCAACCAAAATGTGGAAATTCCCTTCAAAATCGACTGGACTAAGGCAAAAATCTTGAAAAATCTCAGAATTAAGCTATTACACTCCAATAGAGAACACAAAATCACTGGACTTAGCAACAGGACATGTAAAGAGGAGAAGTTTCTTCTGCGGTTGAGGGGATCCAATAATCAAAATGACAATGGCCAGACTGTTGAGATAACTGTTTATGAATATTTTGTTAGGAGATGTGGAATAGAACTCGGTTATTCATCAAACTTGCCATGCATCAATGTGGGGAGCCAGCACAAACCCCAGTTCATTCCTGTTGAGCTCTGTTCGTTGGTTCCCTTACAACGATTCAAAAAGGAATTATCCTTACATCAAAGATCCTTATTAGTGAACAACTCGAGCCAAAAGCCGATAGAGCTCATGAAGCATTTAAATGAGGAACTTAAAGCCAACGACTATAACACAGACCCTATGCTGCGCGCTTGTGGAATCTCAATTAATAAATCTTATACTGAAGTAGAGGGAAGAGTTCTATTTCCTCCACAGTTGAGAGTGGGAAACAAGGAATATCTTGCTTCAAGATTTTCGCGCTGGAGCTTTAACGGCAAGAAGTTTGCAGATCCAAAAAGCATTGAATTTTGGGCTGTGGTGAACTTCTCTACTGGTCATGACATACGTGCTTTCTGCATTGAAATGGCGAAATTGGGTGCAATGAGAGGAATGCACATTCATCCACCATCATTTGTTTTCGAAGAGAATGCTAAGCATAAAAAGAAACCGGGATCTGTTCGAGTGAACAAGATGTTTGAACAAATAATTCCAAAATTTCGCAAGGATCCTCCTCGATTCCTTCTTTGCTTTCTTCCTGCAAAGTTTTCTAATTTATATGGTCCATGGAAGAAAAAGTGTCTTATGACCTTCGGAATTCGTAACCAGTGCATTGCAAAGAACAAAGTTGATGAAACTTATCTTGCTAATGTTATGTTAAAAATTAATGCAAAAGTATGGGACACTAATCGCTTCTTTACATATATGTTGATCACTCATAAAAATTCTAAAAGTTTGGTTGTGCTGCAGCTTGGTGGTCTGAATTCTATGTTATCAGCAGAAGTTTCACAGACTATCCCCTTAGTTTCTAAAGTTCCCACAATGATCTTAGCAATGGGTCTTACGCATGCCCCTTCTTCACGGTCAGATTTACCCTCCGTTGCTGCAGTGGTCGGTTCTAGACAGTGGCCGATGATTTCTTACTATAGAGCATCTACTTGTATCCAACCACCAAAGACCGAAACTATACATTCTCTCTTTAGACCAGTTTCAGATAGGGAGGACACAGGCATGATCAGGGAGCTCCTAATGGATTTTCATGCAAGTTCAGGGAATAGGAAGCCTGAACAGATTATTATATTCAGACAAGGTTTAGGTGAATCTCAATTCAATCATATCTTTAGCGAAATGGAGGAAATTATTAAGGCCTGTAAGTTCCTGGATGAGACTTGGTCTCCTAAGTTCACTCTTATTGTTGCACAAAGAAGACATCACACAAAGTTGTTCCAACCTAATTCCAGTGACAATATTCCTCCTGGAACAGTCGTTGATACTAAAATTTGTCATCCGCTGTATAATAACAACTTCTACATATGTGCACATGCGGCAAGAGTTGGGACTAGCAGGCCAATTCACTACTTTGTGCTGTTGGATGAAATAGGTTTCTCATCTGATACTGTGCAGGAACTAGTCCATTGTTTATGTTACGTGTCTCAGAGATGCACCAGTGCTATATCTGAAGTGGCTCCAATTCGTTATGCTCGTTTGGTTTCAGCTCAGATGTTAGAAATTATGAAGACTGAGGGGCCTGAACTGCCAATGTTGCACAAAAATGTGCGCGATACAATGTTTTTCTGCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g111760.2.1SL2.50ch03:62394004..62399639917-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g111760.2SL2.50ch03:62394005..623999685,964-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g111760.2.1.1SL2.50ch03:62399593..62399968376-n/a
exonexon:Solyc03g111760.2.1.10SL2.50ch03:62396587..62396694108-n/a
exonexon:Solyc03g111760.2.1.11SL2.50ch03:62396430..6239649263-n/a
exonexon:Solyc03g111760.2.1.12SL2.50ch03:62396246..62396359114-n/a
exonexon:Solyc03g111760.2.1.13SL2.50ch03:62395989..62396154166-n/a
exonexon:Solyc03g111760.2.1.14SL2.50ch03:62395590..62395915326-2
exonexon:Solyc03g111760.2.1.15SL2.50ch03:62395361..62395491131-n/a
exonexon:Solyc03g111760.2.1.16SL2.50ch03:62395146..6239521166-1
exonexon:Solyc03g111760.2.1.17SL2.50ch03:62394927..6239498761-1
exonexon:Solyc03g111760.2.1.18SL2.50ch03:62394727..62394838112-n/a
exonexon:Solyc03g111760.2.1.19SL2.50ch03:62394553..6239462977-2
exonexon:Solyc03g111760.2.1.2SL2.50ch03:62398471..62398630160-1
exonexon:Solyc03g111760.2.1.20SL2.50ch03:62394333..6239442795-n/a
exonexon:Solyc03g111760.2.1.21SL2.50ch03:62394221..6239425232-1
exonexon:Solyc03g111760.2.1.22SL2.50ch03:62394005..62394123119-2
exonexon:Solyc03g111760.2.1.3SL2.50ch03:62398183..62398388206-n/a
exonexon:Solyc03g111760.2.1.4SL2.50ch03:62397813..62398061249-1
exonexon:Solyc03g111760.2.1.5SL2.50ch03:62397618..62397754137-1
exonexon:Solyc03g111760.2.1.6SL2.50ch03:62397431..6239752898-2
exonexon:Solyc03g111760.2.1.7SL2.50ch03:62397264..6239735895-n/a
exonexon:Solyc03g111760.2.1.8SL2.50ch03:62396995..62397166172-1
exonexon:Solyc03g111760.2.1.9SL2.50ch03:62396777..62396893117-n/a
intronintron:Solyc03g111760.2.1.10SL2.50ch03:62396695..62396776n/a-n/a
intronintron:Solyc03g111760.2.1.11SL2.50ch03:62396493..62396586n/a-n/a
intronintron:Solyc03g111760.2.1.12SL2.50ch03:62396360..62396429n/a-n/a
intronintron:Solyc03g111760.2.1.13SL2.50ch03:62396155..62396245n/a-n/a
intronintron:Solyc03g111760.2.1.14SL2.50ch03:62395916..62395988n/a-n/a
intronintron:Solyc03g111760.2.1.15SL2.50ch03:62395492..62395589n/a-n/a
intronintron:Solyc03g111760.2.1.16SL2.50ch03:62395212..62395360n/a-n/a
intronintron:Solyc03g111760.2.1.17SL2.50ch03:62394988..62395145n/a-n/a
intronintron:Solyc03g111760.2.1.18SL2.50ch03:62394839..62394926n/a-n/a
intronintron:Solyc03g111760.2.1.19SL2.50ch03:62394630..62394726n/a-n/a
intronintron:Solyc03g111760.2.1.2SL2.50ch03:62398631..62399592n/a-n/a
intronintron:Solyc03g111760.2.1.20SL2.50ch03:62394428..62394552n/a-n/a
intronintron:Solyc03g111760.2.1.21SL2.50ch03:62394253..62394332n/a-n/a
intronintron:Solyc03g111760.2.1.22SL2.50ch03:62394124..62394220n/a-n/a
intronintron:Solyc03g111760.2.1.3SL2.50ch03:62398389..62398470n/a-n/a
intronintron:Solyc03g111760.2.1.4SL2.50ch03:62398062..62398182n/a-n/a
intronintron:Solyc03g111760.2.1.5SL2.50ch03:62397755..62397812n/a-n/a
intronintron:Solyc03g111760.2.1.6SL2.50ch03:62397529..62397617n/a-n/a
intronintron:Solyc03g111760.2.1.7SL2.50ch03:62397359..62397430n/a-n/a
intronintron:Solyc03g111760.2.1.8SL2.50ch03:62397167..62397263n/a-n/a
intronintron:Solyc03g111760.2.1.9SL2.50ch03:62396894..62396994n/a-n/a
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