Solanum lycopersicum mRNA Solyc03g111380.2.1

mRNA details  
Name
Solyc03g111380.2.1
Type
mRNA
Length
1,859
Organism
Solanum lycopersicum
Description
Tubulin beta-1 chain (AHRD V1 ***- C1BSD0_9MAXI); contains Interpro domain(s) IPR002454 Gamma tubulin
Location(s)
SL2.50ch03:61965374..61973005
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005874
  • GO:0043234
Length
7632
Nb exon
11
Sifter term
GO:0005200
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g111380.2.1 Tubulin beta-1 chain (AHRD V1 ***- C1BSD0_9MAXI); contains Interpro domain(s) IPR002454 Gamma tubulin

TAAGCCTCACTTTTTTTCCCTCTTTTCTTTTTCGAAACCTCCGTTTTGGCTACGCCCCACAAAAAGCGCCCAAAAAGCCAAAGTAGAAGCTAATTCCGATTGCTCTTTCTCTCCTTCTCGCAGATCCATAACTTGTGCAGTTTACTCCTGATACTGCTAAGCCTGAAGGAACCAACGAGTAAGAAAGTAGAAGGAAAATGCCGAGAGAAATTATCACATTGCAAGTGGGACAATGCGGGAACCAGATTGGAATGGAGTTCTGGAAACAGCTATGTCTCGAGCACGGTATCAGTAAAGAAGGCATCCTTGAAGATTTTGCTACTCAGGGAGGTGATAGAAAAGATGTATTTTTCTATCAAGCGGATGACCAACACTACATACCTCGAGCATTATTGATGGATCTAGAGCCCAGAGTGATTAATGGTATACAAAATGGTGAATATAGGAATCTCTACAATCATGAGAACGTATTCATTGCAGATCATGGAGGAGGTGCTGGAAATAATTGGGCAAGCGGATATCATCAGGGTAAGCAATATGAGGAGGATCTAATGGACATGATTGACAGGGAAGCAGATGGAAGTGATAGTCTCGAGGGTTTTGTTCTATGCCATTCGATTGCTGGTGGAACTGGCTCAGGTATGGGCTCATATCTGTTGGAGACTCTGAATGATCGCTACAGCAAAAAACTTGTCCAAACCTACAGTGTCTTTCCAAACCAAAATGAGACAAGTGATGTGGTTGTACAACCTTACAATTCCCTATTGACACTCAAGCGCCTGACATTGAATGCGGATTGTGTAGTTGTACTTGATAATACTGCTCTCAATAGAATTGCTGTAGAACGCCTGCATATTACGACCCCCACCTTTACTCAAACAAATTCCTTGGTGTCAACTGTAATGTCAGCAAGTACAACTACACTACGCTACCCAGGATACATGAACAATGACTTGGTTGGACTCCTTGCTTCTTTGATACCTACACCAAGATGCCATTTCCTTATGACTGGATATACACCACTCACTGTGGAACGTCAAGCTAATGTGATTAGGAAAACGACTGTACTTGATGTGATGAGGAGGCTCCTTCAGACCAAGAATATCATGGTTTCCTCCTATGCTCGAACAAAGGAAGCCAGTCAGGCTAAATACATATCCATTTTAAACATCATCCAAGGAGAAGTTGATCCCACTCAGGTCCATGAAAGCCTGCAGAGAATAAGGGAGAGAAAGCTTGTTAATTTTATTGAGTGGGGCCCTGCAAGCATTCAGGTTGCTTTGTCTAGAAAGTCCCCTTATGTGCAAACTGCTCATAGGGTTAGTGGTCTCATGCTGGCCAGCCATACAGGTATCCGCCACTTATTCAGCAAGTGTTTGACCCAGTATGATAAATTGAGAAAGAGACAAGCTTTCCTTGACAATTATAGGAATCACCCAACGTTTGCCGACAATGATCTATCCGAGTTTGACGAATCTAGAGATGTGATTGAAAGTCTTGTTGATGAGTACAAGGCTTGCGAGTCCCCAGATTACATCAAATGGGGAATGGAGGATCCCGACCATGCTCTAACAGGCGAAGGAAGCGCTAGTGGAACGATTGATCCAAAATTATCTCTATGAGCAAGTCAACTATTCCCTGTTTCAACTCTGCAGGAAAAAAAAAGACTTTGTTCCTTGTAATTATCTCTATAATTTAATTAGTCTTCATGAGAACTCAATTTGGGACTCAACTTATTTGTTAAGAGTCATTTGGTTTTGTTTACATTAGCAAATTCATGGTAAGATGTGAAATTGTTCTAGAGAAATCTCCAGCAATGAAGTACTGTTTCATATATATTTTGAGCATAACAATCGAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g111380.2.1SL2.50ch03:61965610..61972808475-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g111380.2SL2.50ch03:61965374..619730057,632-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g111380.2.1.1SL2.50ch03:61972680..61973005326-n/a
exonexon:Solyc03g111380.2.1.10SL2.50ch03:61965777..61965881105-n/a
exonexon:Solyc03g111380.2.1.11SL2.50ch03:61965374..61965679306-n/a
exonexon:Solyc03g111380.2.1.2SL2.50ch03:61971047..61971247201-n/a
exonexon:Solyc03g111380.2.1.3SL2.50ch03:61970408..61970519112-2
exonexon:Solyc03g111380.2.1.4SL2.50ch03:61969897..61970297401-n/a
exonexon:Solyc03g111380.2.1.5SL2.50ch03:61968790..6196884354-n/a
exonexon:Solyc03g111380.2.1.6SL2.50ch03:61968612..61968716105-n/a
exonexon:Solyc03g111380.2.1.7SL2.50ch03:61968038..6196811275-n/a
exonexon:Solyc03g111380.2.1.8SL2.50ch03:61967912..6196795645-n/a
exonexon:Solyc03g111380.2.1.9SL2.50ch03:61967208..61967336129-n/a
intronintron:Solyc03g111380.2.1.10SL2.50ch03:61965882..61967207n/a-n/a
intronintron:Solyc03g111380.2.1.11SL2.50ch03:61965680..61965776n/a-n/a
intronintron:Solyc03g111380.2.1.2SL2.50ch03:61971248..61972679n/a-n/a
intronintron:Solyc03g111380.2.1.3SL2.50ch03:61970520..61971046n/a-n/a
intronintron:Solyc03g111380.2.1.4SL2.50ch03:61970298..61970407n/a-n/a
intronintron:Solyc03g111380.2.1.5SL2.50ch03:61968844..61969896n/a-n/a
intronintron:Solyc03g111380.2.1.6SL2.50ch03:61968717..61968789n/a-n/a
intronintron:Solyc03g111380.2.1.7SL2.50ch03:61968113..61968611n/a-n/a
intronintron:Solyc03g111380.2.1.8SL2.50ch03:61967957..61968037n/a-n/a
intronintron:Solyc03g111380.2.1.9SL2.50ch03:61967337..61967911n/a-n/a
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Related viewsNone found
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