Solanum lycopersicum mRNA Solyc03g111270.2.1

mRNA details  
Name
Solyc03g111270.2.1
Type
mRNA
Length
960
Organism
Solanum lycopersicum
Description
DNA binding protein (AHRD V1 ***- B6T3K5_MAIZE); contains Interpro domain(s) IPR018276 Ubiquitin ligase, Det1/DDB1-complexing
Location(s)
SL2.50ch03:61882283..61887871
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
5589
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g111270.2.1 DNA binding protein (AHRD V1 ***- B6T3K5_MAIZE); contains Interpro domain(s) IPR018276 Ubiquitin ligase, Det1/DDB1-complexing

TAGATGAGAGCAAATTCTATTTTACCGCCCCCACGAACCACTATTAAGGGGGGAAAATGTATTTTCTCCTTTCTGTCTAAACTTGAATCAGTTTTGCAGAGCGGCAACTATGGAGGATACCTCATCATCCATTTCTCCGAACAATGCCACAACTTCCGGTGCGGCCAAATACCTAGCCGGCCTCCCTTCTCGCGGCCTTTTCTCCTCCAACGTCCTCTCCTCTACTCCGGGTGGAATGCGAGTATATGTTTGCGATCACGAAACGTCACCTCCGGAGGACCAGCTTATTAAGACCAACCAGCAAAACATATTGATTAGGTCTCTCATGCTTAAGAAGCAAAGAGGTGAATGTAGTTCAAAAGAAGGCAAGGGGGTTTCCTCAAATGACAATGGTAGAAAAAGAGCGGCTGAAAAAGCATTGGATAGTAGGGCATCAGCCAAGAAGGCTACCACCAGTAACCATGCTGCCTCTGCCCAAGGAACTTCAAAAAATCGTGCACCTGAAATACAAAATATGACTGTTGAGAAGCTACGGGCTTTGTTAAAGGAGAAAGGTCTTTCACTGAGAGGAAGGAAGGATGAACTAATTGCTCGGTTAAGGGGGGACACATGACTAAAGCATATTCGTAGAGTTTGAGGCAGCTGATTCCAAATTCCATTTTGTACACCTAGCAGCTGGGCAAAAGTAGGCTTTTGCTTCTCTATTATGGGTGCTTTACAACTAGTTAAAGAGTCAACTTATGGCCCTTACAACTCTTGTGTCGCGTTCTGCGTGTTTCTGTGTTCTTGTTGTATGCTATAGTATTTTGTAGTTAAATTATGAGGGGGCACTATACTTGTGCCTGAATAGTTACCTAATACTTCTAATATGTGAAAAACTGCATGTCAATTTTTTTCTGGTCACTGCAAATTCACAATGAAACTGGTCTTTCAAAATCTACTATTGTCAGCTTTTGCGTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g111270.2.1SL2.50ch03:61882391..61887524168+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g111270.2SL2.50ch03:61882283..618878715,589+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g111270.2.1.1SL2.50ch03:61882283..61882511229+n/a
exonexon:Solyc03g111270.2.1.2SL2.50ch03:61883572..6188361746+n/a
exonexon:Solyc03g111270.2.1.3SL2.50ch03:61883993..61884119127+n/a
exonexon:Solyc03g111270.2.1.4SL2.50ch03:61884227..6188430377+2
exonexon:Solyc03g111270.2.1.5SL2.50ch03:61887126..6188722398+1
exonexon:Solyc03g111270.2.1.6SL2.50ch03:61887489..61887871383+2
intronintron:Solyc03g111270.2.1.1SL2.50ch03:61882512..61883571n/a+n/a
intronintron:Solyc03g111270.2.1.2SL2.50ch03:61883618..61883992n/a+n/a
intronintron:Solyc03g111270.2.1.3SL2.50ch03:61884120..61884226n/a+n/a
intronintron:Solyc03g111270.2.1.4SL2.50ch03:61884304..61887125n/a+n/a
intronintron:Solyc03g111270.2.1.5SL2.50ch03:61887224..61887488n/a+n/a
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Related viewsNone found
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