Solanum lycopersicum mRNA Solyc03g097290.2.1

mRNA details  
Name
Solyc03g097290.2.1
Type
mRNA
Length
3,346
Organism
Solanum lycopersicum
Description
Alanyl-tRNA synthetase (AHRD V1 **** C1EDP7_9CHLO); contains Interpro domain(s) IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
Location(s)
SL2.50ch03:59613036..59627297
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0003676
  • GO:0005737
  • GO:0000166
Length
14262
Nb exon
23
Sifter term
GO:0000049
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g097290.2.1 Alanyl-tRNA synthetase (AHRD V1 **** C1EDP7_9CHLO); contains Interpro domain(s) IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal

AGGAATGGATGAGGGTTTCAATTGACGGCTCGACTTGGCGTTGTATTGCCTTAGCTTTACCCTACTACTACAGAGCTGCCACACTTCCTTCTTCCGCCGCCTTGCTGCTTCCTCCGTCGCCGGCGGTGAGTGGACGGCTGTTTAATTTCACACGTACCTTTTCTGTTTCAAAGCCGATGGGTTCTCAGCCGGAAGTATTGGATTGGCCGGCCAATAAGGTCCGGCAGACTTTTATCAGCTTCTTCCAAGGGAAAGATCATAAAGAGGTTCAATCCAGTCCTGTAGTTCCTCATAATGACCCTACTCTTCTATTCGCTAATGCTGGGATGAATCAGTTTAAGCCTATTTTCTTGGGTATTGTTGACCCTAATAGTCCGTTGAGTAAACTTAAGCGTGCCTGCGATACACAGAAGTGTATTCGTGCTGGTGGCAAGCATAATGATCTTGATGATGTTGGTAAGGATACTTACCATCACACATTCTTTGAGATGCTTGGTAATTGGTCATTTGGGGATTATTTCAAGAAGGAGGCAATTGGATGGGCCTGGGAACTACTTACCCAGGTATATAAACTGCCAAGTGAACGGATTTATGCCACTTATTTTGGAGGTGATGAAAAATCTGGCCTTCCAGCGGATAATGAAGCTAGAGACCTATGGCTTAAGTTCCTTCCTCCTAGCAGGGTGTTGCCTTTCGACTGCAAAGACAACTTTTGGGAGATGGGTGATACTGGACCTTGCGGACCCTGCACCGAAATACACTTCGATAGAATTGGGAATCGTGATGCTGCATCATTTGTTAATAATGATGATCCCACTGTGATTGAGATATGGAACCTTGTCTTTATTCAGTTTAATAGGGAAGCTGATGGTTCTTTGAAACCTCTTCCAGCTAAGCATGTTGATACTGGAATGGGTTTTGAAAGACTAACCTCTATCCTCCAGAACAAGATGAGCAATTATGATACTGATGTGTTCTTACCCATATTTGATGCTATACAAAAGGCAACTGGAGCTCGTCCGTACTCTGGCAAAGTTGGAGCTGATGATGTGGACAATGTTGATATGGCCTATAGAGTTGTTGCTGACCACATTCGAACTCTCTCTTTTGCCATTGCTGATGGTTCTTGCCCAGGGAATGAAGGCCGTGAATATGTCCTCAGACGCATTCTACGTCGAGCAGTGCGCTATGGTACAGAGGTTTTGAAAGCGCAACAAGGATTTTTCAGCAGCCTTGTGAAGGTGGTGGTAGAAGTTATGGGTGATGTCTTCCCAGAGCTGAAGTTGCGTGAGACACATATAAGGGATATCATTGCTGATGAAGAAACTTGCTTTGGAAGGACATTGCTTCATGGAATCGAGAAATTTAAGAAGGCAGCTCAAGAGGTTCAAGGAAAGCAATTTAGTGGTCAGGAGGCATTTGTCTTGTGGGACACTTACGGATTTCCATTAGATTTGACCCAGTTAATGGCAGAGGAACGAGGCTTGGTTGTTGATGTTGATGGTTTTAATGTTGCTATGGATGCTGCCAGGGAAAGATCAAGAAATGCTCAGAGCAAGAATGCCAGTGGTGCTATTGCCATGGATGCTGACGCTACTGCAGCATTGCACAAGAAAGGGGTCGCTGCAACAAATGATACTTTCAAGTTCACTTGGTCTCAGGATCATGAGAGTGAGATAAAAGCTATCTACACTGGAACTGAGTTCTTGGAAAGTGCAGCAGCTGGGAATGAAGTTGGTATTATTCTTGAGAGCACCAGTTTCTATGCTGAACAAGGTGGTCAGATATACGACACTGGTTCACTGGAAAGCCCCAGTGGCTCTTTTCAAGTTTGTAATGTTCAAATTTATGGAGGATTCATTCTTCATATTGGATCATTCAGTGGACAGGCACACAAGTTCTCTGTTGGTGATAAAGTAATTTGTAAGGTTGACTATAACAGGCGTACATTGATTGCTCCCAATCATACATGCACTCACATGTTAAATTTCGCCTTAAAGGAAGTACTAGGCGACCATATTGACCAGAAAGGTTCCATTGTTCTTCCTGAAAAATTGAGATTTGACTTCTCTCACGGGAAGCCAGTAAAGACGGAAGAGCTAAGAAAAATTGAATCCATTGTCAATGAGCAAATTAAGTCCGAATTGGATGTATTCTCAAAGGAGGCAAAGCTGTCTGATGCTAAGAGTATAAAAAGTCTTCGAGCTGTCTTTGGTGAGGTGTATCCAGATCCTGTGCGGATTGTGTCAATTGGTCAGAAAGTGGAGGATCTTCTTGCTAATCCAGAAAATGAAGAATGGTCATCCTACTCTGCTGAGCTCTGTGGTGGAACACACATTTCTAATACAAGAGAAGCTAAGGCATTTGCTCTGATGTCTGAGGAGGGAATTGCCAAGGGAATCCGAAGGGTTACTGCTGTCACAACTTATCGTGCTTTTGAGGCCACTGATTTGGCATCCTCACTCGAACAGAAAGTAAATGAAGCATCCCAGACTGATGAAAGCTTGCTGGAAGAGAAAGTAACTTCTTTGAATGCTACTGTGGAGAGGGCACAAATTCCCACTGTTGTGAAAACTGATCTCAAGGCCAAGCTCTCGGTCCTCCAGGATCGAGTTATAAAGGCCAAAAAGAAGATAGCTGCTGAGAATATACAAAAAGCCGTCAAAGCTGCCTCAGAAATGGCTGAAGCTGCAGCTTCTGGTGGAAAAGCATACTGCATCTTGCAGATTGGCGTGGGTTTGGACACTGCTGCAGTCCGTGAAGCAGTTGTCAAAGTCATGGAGCAGAAGGGTATGGCAGTTCTGGTATTTAGCAAAGATGAAGCTGCAAAAAAAGTTTTGGTCTGTGCTGGGGTACCTGAGAAAGGTGACAAGTGCAAGCAGTTGAATGTTAAAGATTGGTTGAATGCAGCTTTGAAGCCCTTGGGAGGTAAGGGTGGAGGAGGAAAAGGTGGTCTCGCCCAAGGCCAGGCAACTGATATATCAAAGGTTGACGAGGCAATGGATGTTGCAGCATCGTTTGCAGCTTTGAAATTAAATTGATGACTAAGGCCAGTATATCGTTGCAGTGTTCAATGGCTGAGGCTGGTGCAACTATTGTAAGCAAAAAAATTGGTTGATCAAGATTTTCAATAGGTCGTGGAGGCTCTCAGAGCTAACTTCCATCATATACAACTGTGGGGTCATTTATGTTGCTTTCTGTGAGCCAAACTTTATACATGCAGAAAGTAAAGGATAATTATAGAAGACTTGTATTGAAGTTACCTACTTATTGCATACTGCATAATTTTTATACACGAGAATGATGAAAGTACAAAGATTTTCCTGTTGTGATAGTGCATTTGTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g097290.2.1SL2.50ch03:59613043..596269921,011+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g097290.2SL2.50ch03:59613036..5962729714,262+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g097290.2.1.1SL2.50ch03:59613036..59613359324+n/a
exonexon:Solyc03g097290.2.1.10SL2.50ch03:59619251..5961930151+n/a
exonexon:Solyc03g097290.2.1.11SL2.50ch03:59619370..5961946596+n/a
exonexon:Solyc03g097290.2.1.12SL2.50ch03:59620348..59620449102+n/a
exonexon:Solyc03g097290.2.1.13SL2.50ch03:59621260..59621382123+n/a
exonexon:Solyc03g097290.2.1.14SL2.50ch03:59622831..59622974144+n/a
exonexon:Solyc03g097290.2.1.15SL2.50ch03:59623088..5962315972+n/a
exonexon:Solyc03g097290.2.1.16SL2.50ch03:59623254..5962332976+n/a
exonexon:Solyc03g097290.2.1.17SL2.50ch03:59623424..59623566143+n/a
exonexon:Solyc03g097290.2.1.18SL2.50ch03:59623649..59623757109+2
exonexon:Solyc03g097290.2.1.19SL2.50ch03:59623846..59624033188+n/a
exonexon:Solyc03g097290.2.1.2SL2.50ch03:59613453..59613691239+n/a
exonexon:Solyc03g097290.2.1.20SL2.50ch03:59626021..5962611090+2
exonexon:Solyc03g097290.2.1.21SL2.50ch03:59626191..59626373183+n/a
exonexon:Solyc03g097290.2.1.22SL2.50ch03:59626459..59626638180+n/a
exonexon:Solyc03g097290.2.1.23SL2.50ch03:59626921..59627297377+n/a
exonexon:Solyc03g097290.2.1.3SL2.50ch03:59613832..59613972141+2
exonexon:Solyc03g097290.2.1.4SL2.50ch03:59614861..59615007147+n/a
exonexon:Solyc03g097290.2.1.5SL2.50ch03:59615078..59615230153+n/a
exonexon:Solyc03g097290.2.1.6SL2.50ch03:59615916..59616045130+n/a
exonexon:Solyc03g097290.2.1.7SL2.50ch03:59616565..5961666197+n/a
exonexon:Solyc03g097290.2.1.8SL2.50ch03:59616805..59616925121+2
exonexon:Solyc03g097290.2.1.9SL2.50ch03:59617876..5961793560+1
intronintron:Solyc03g097290.2.1.1SL2.50ch03:59613360..59613452n/a+n/a
intronintron:Solyc03g097290.2.1.10SL2.50ch03:59619302..59619369n/a+n/a
intronintron:Solyc03g097290.2.1.11SL2.50ch03:59619466..59620347n/a+n/a
intronintron:Solyc03g097290.2.1.12SL2.50ch03:59620450..59621259n/a+n/a
intronintron:Solyc03g097290.2.1.13SL2.50ch03:59621383..59622830n/a+n/a
intronintron:Solyc03g097290.2.1.14SL2.50ch03:59622975..59623087n/a+n/a
intronintron:Solyc03g097290.2.1.15SL2.50ch03:59623160..59623253n/a+n/a
intronintron:Solyc03g097290.2.1.16SL2.50ch03:59623330..59623423n/a+n/a
intronintron:Solyc03g097290.2.1.17SL2.50ch03:59623567..59623648n/a+n/a
intronintron:Solyc03g097290.2.1.18SL2.50ch03:59623758..59623845n/a+n/a
intronintron:Solyc03g097290.2.1.19SL2.50ch03:59624034..59626020n/a+n/a
intronintron:Solyc03g097290.2.1.2SL2.50ch03:59613692..59613831n/a+n/a
intronintron:Solyc03g097290.2.1.20SL2.50ch03:59626111..59626190n/a+n/a
intronintron:Solyc03g097290.2.1.21SL2.50ch03:59626374..59626458n/a+n/a
intronintron:Solyc03g097290.2.1.22SL2.50ch03:59626639..59626920n/a+n/a
intronintron:Solyc03g097290.2.1.3SL2.50ch03:59613973..59614860n/a+n/a
intronintron:Solyc03g097290.2.1.4SL2.50ch03:59615008..59615077n/a+n/a
intronintron:Solyc03g097290.2.1.5SL2.50ch03:59615231..59615915n/a+n/a
intronintron:Solyc03g097290.2.1.6SL2.50ch03:59616046..59616564n/a+n/a
intronintron:Solyc03g097290.2.1.7SL2.50ch03:59616662..59616804n/a+n/a
intronintron:Solyc03g097290.2.1.8SL2.50ch03:59616926..59617875n/a+n/a
intronintron:Solyc03g097290.2.1.9SL2.50ch03:59617936..59619250n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17766712%2Fdetails feature 17766712
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