Sol Genomics Network

Solanum lycopersicum gene Solyc03g096640.2

Name Solyc03g096640.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc03g096640	Length 3,231

Description

Dehydrogenase/reductase SDR family member 4 (AHRD V1 **-* DHRS4_RABIT); contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase

Location(s)

SL2.50ch03:58889730..58892960

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3231

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc03g096640.2.1	SL2.50ch03:58889730..58892960	1,169	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc03g096640.2 SL2.50ch03:58892960..58889730 (sequence from reverse strand)
TAAATATGTATTATTTTAAAACCTTAATATCACTTTTCTTTAAAAATCCCTAGAAAGCAGTAGTATGTCAACGGCGAAGGCTGCAGGCAGTTCCAGATGGTCTCTTTCTGGATTTACCGCTCTCGTTACCGGTGGAACACGAGGAATCGGGTAAAGGCAACTCCAATACCTTAATTTCTTTTTAAAAGTTTCTACTCTATGATTCTGGGTTTCAATTTGGATGAGTGTTCTCTTTAGGCATGCGGTTGTTGAGGAATTAGCGGAACTGGGTGCCACAGTCTACACCTGTTCACGAAATGAGGCAGAGCTCAACGAACGCTTACAAGAGTGGGCGGTTAAAGGCCTTCAAGTCAAGGGTTCTGTTTGCGATGCATCTTCTAGGGAACAGAGAATTCAACTCATGGAAAATGTCTCCGCAGCTTTCGACGGAAAGCTCAACATTCTTGTCAGTTCTCTCTCTATACAAAATAATCAATTCCATGTAACATTAACAAAGTATTGTAGTGTTGTGCCAGCCAAGTATGTGGAAATTCTTTTTGATATGGGTGTAGTGTAGTTGAGATTCAATTTGAGGACCTTTGTCAGTTGACACCGTTTCATCTAAAAGCCCTAGAACCGACACATTTTTATTATTTAATTTATTCTCGACATATGTTAGAGCTTAGTATTTGCAGAGCTCGTTTGTTCCGACTATGGTTAGTCTCTGATTTAATGGTGAAAGAATAGGAAATATTGATATATAGAGCTTATGTAGCATTAATATTCTTTTCATTCTTAGATATTTTTTTTCTCAGACTTTATATGTGATTGTTAAGGTTCTAATTTAGAATGGTGGTGTTACATGTGCTTTCAAACGTTAAAGCTTCTTAAGGATTTTTATTACTAGTTATTAGTGCCAGAAAAAGTTCTAAAAGAAATTTTTGCATTCTCAATCTGAATCCGGTGCTCTTGGACGTGTATGCTTTCTGTTTTTAGATGCCCTCATTTTCAAACAGTGTAAAGTTTTTGAACTGCGTTATTGCTTGTCTCTGTCCATAGATAAACAATGTGGGAACTAACATTAGGAAGCCCACCACCGATTACACTGCTGAGGAATATGCCCATCTGTTCTCTACCAACTTGGAATCTGCATACCATCTGTGCCAACTTGCTCACCCTCTTTTGAAAGCATCTGGAAATGGATCGGTTGTCTTTATCTCTTCTGTTGCTGGTCTGGTGCACCTGTCCAGTGGTTCTATTTATGGAGCAACGAAAGGTTAGTTGTACTCATCCAATCACTCTTTTAAGTCCTTGAACAATTGAAGATAGATTGCTGAGATTTTTTATTTTTTTCTTACAAACTTCAGGGGCAATAAATCAGCTCACGCGAAATTTGGCTTGTGAATGGGCAAAAGATAACATTCGGGTTAATGGTGTTGCCCCGTGGTATATAAAGACGTCTTTGGTAGAACATGTAATATTCTTGACCTTGCGTATGAATTTGATTTCATGAATCTCGTTGCCCAAGTAATTGCAGATTGGAGATATAGATATTGGAAGTTTACCTGAGGCAAAACATTTCTTTGATTTCTCTGAGGCCCGAGCAGAGAATGTAGTTTAGACTGCATCACATGCTCACAAACTGGCCTTTAGGAGATCTTAATGTTCACAATAAAGAAACTAAATATAAAGCATGCCACACATTGAGCACATAGTGAACTATTCTTTTGCCTTTTACCAAGACTATGCCTGCCTTTTACACAAAGTGGCATAGGCCACATTGAAGAACAGCCATTGCACAAGTACATGGCTTAGCAATCATCTGACTTACAGACTCCAACAATTATATGTATTGTAAAATGGATTTTGTATTTTTTATCATGACCTTACATGGTGGATCACAAGTGTGAAAACAACTTTCTGTCATGAACTTTATGATAACTAACTAATTTCATTATGTACATCATCTGTAGGATTTTTTTCTTAGGTGTAAAATCCATTTTCTGCAACCAACTGCCCTGTTAATTTGGATATGTGCCACGTAAGCCCATTAAAAGGGGGAAGAGCTCCCTACCAGGGATTTCGCCATTCCCATGAGACCTCTAGTTAAGAGTACTTGTGTTCCTGTTGCATTCATTTAAGGTGGATGTTTAGTAAACAACAAGTGGCAAATTGCTAAAGCACTTGGATAGTTGGATTCCTGTATCTATAAAAATGTCATGATTCCTATTGTTCATTTGGAAAAGGAATTGCACATGGAGAAACAGTGTTTGTGCTTTTCCATGCCTTAGATCTATTCTTCAACCATTTTCATATATATTCATACTTTTTTCTTTCTGCAAATAAAGTTTATTCAATTTCTTGTTCTTATATTGTCAAGCATATTTGACTGTATTGAAATATTTTGAGTTGCGGCAAATAACTTTGGAAATATCTCTGATTAATATCTTTTTTGCTAGAAAATAAAATCCCCTGAATGTGTCCGGAAAATTTTGTTATTTTCCTAGTTTTTTGTCTAGAGAAATATGTTAGGATTGCTGTGTTTTTTGAAGAGTAGGTATTTTTTTTGGTTATATGTATTTACAAAGTATGTTGATAACTCATTTCACAAATGGGGTTAATTCTATTTCTTGTGGAGGATGCTTCTGGATTTTATATGTAAAGCAATGAGAAGACTATCACTTGCTGTATTCTATGTTTATATAATCTATCACTTAACCACATGTTCTCCAAATTTTTCTGAATTTTATGGTTTTCTATTGCAGTTGCTCGAAAATAAAACATTTTTGGATGGAGTAATATCTAGAACTCCCCTTAGACGCCCTGGAGAATCTCAAGAAGTTTCATCCCTGGTAGCTTATCTATGTTTACCTGGGGCATCTTACATTACCGGGCAAGTTATAGCGGTTGATGGTGGATTCACAGTCAATGGATTTGAAATGCCAAGTTTCTGATTTTTATGGTCCATGTAGCTTTTACATGTGCAAACACCCATCTTTGTTTCTTAGTGATCACGTTGAGACCGACATGAATAAAGCTCTATTTAATATCTTCCTTAGTCCCTGTTTATCAGATCATGAGAAGAGCATTTTTTGTAGTTGATTATGTTGGGCATCATACTAAGTTGTTTTTTCATCTTTGCACGTTCCATGGCCCTACTTTTGTTGAAATGCAATTTCTTATTTTATTTGAACTGTTGGGAGGGAAACATTTGATTATTTACACATAAGACCTCCCAACTCATTCATCGTG

Download sequence region

Download sequence (3.2Kb)

Get flanking sequences on SL2.50ch03

mRNA Solyc03g096640.2.1

Ontology terms

terms associated with this mRNA

GO:0010301 – xanthoxin dehydrogenase activity

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc03g096640.2.1	SL2.50ch03:58890027..58892896	269	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc03g096640.2	SL2.50ch03:58889730..58892960	3,231	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc03g096640.2.1.1	SL2.50ch03:58892811..58892960	150	-	1
exon	exon:Solyc03g096640.2.1.2	SL2.50ch03:58892516..58892723	208	-	n/a
exon	exon:Solyc03g096640.2.1.3	SL2.50ch03:58891706..58891922	217	-	2
exon	exon:Solyc03g096640.2.1.4	SL2.50ch03:58891508..58891614	107	-	n/a
exon	exon:Solyc03g096640.2.1.5	SL2.50ch03:58889730..58890216	487	-	n/a
intron	intron:Solyc03g096640.2.1.2	SL2.50ch03:58892724..58892810	n/a	-	n/a
intron	intron:Solyc03g096640.2.1.3	SL2.50ch03:58891923..58892515	n/a	-	n/a
intron	intron:Solyc03g096640.2.1.4	SL2.50ch03:58891615..58891705	n/a	-	n/a
intron	intron:Solyc03g096640.2.1.5	SL2.50ch03:58890217..58891507	n/a	-	n/a

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Related views

Genetic loci

Tomato locus Solyc03g096640

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17765911%2Fdetails feature 17765911

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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