Sol Genomics Network

Solanum lycopersicum gene Solyc03g096030.2

Name Solyc03g096030.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc03g096030	Length 2,334

Description

Os03g0291800 protein (Fragment) (AHRD V1 **-- Q0DSS4_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant

Location(s)

SL2.50ch03:57841414..57843747

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2334

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc03g096030.2.1	SL2.50ch03:57841414..57843747	1,789	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc03g096030.2 SL2.50ch03:57843747..57841414 (sequence from reverse strand)
TACTCTTCTCTTCCTCTATATTTCCTATTCTCATCTCACCATTAATAACACCCATACTCATTTCTCATGTATTCATCACTTCGTAGTCGTAAAACCCCTCTTTTCTTCTCCTCCAATTTACTCAAGATGAAGCATAATGCCCGCAAGAACAATCATTTTTCCATATTCGTTGTCGTTTTCTCCATATTCCTCTTTGGATGCTTCATGTACAATGAAGACGTCAAAACTATTGCGGAATTCCCATTTTCAATGACTAGAAATCAAGATATCTACACTCCACCTTTGAATCAACAAAATGGGGTTCAAGAAATTGAGACTAAGGTAGTAATGAATTCAAGAACAGAGCAAGAAACAGAGCAAGAGAAGGAAAAAATTGAAATCCCCGCTGAAGAAGAAGAGGAAGAGGAGAGTATTGAATTGCCACCAGAAGATTGTGATCTTTTTACAGGGCAATGGGTTTACGATAATGTAACACACCCAGTTTATAAAGAACCAGAATGTGAGTTTCTTACAGCACAGGTAACTTGTATGAGAAATGGAAGGGAGGACTCCATGTATCAGAACTGGAGGTGGCAACCCAGAGACTGTTCTTTACCCAAGTATGAACTAATTCTTCATTCTTTTTTTCTTTGTTTGTCCAGTTTTCTTTTTGACAATATATTGAAATTATAGGTTTAAAGCAAAGTTGCTGCTTGAGAAACTGAGGAACAAGAGACTCATGTTTGTCGGAGACTCGCTCAACAGAAATCAATGGGAATCCATGATTTGTTTGGTTCAATCTGCAGTTCCTTCAGGCCGAAAAAGCTTAAACAAGACTGGTTCTTTGTCTGTTTTCAGAATTGAGGTAGTATGATTCAAAAGTCTTTTTTTTTTACTCATGTCAATAAATTGAGACAGAGGGAGTATTACGTTATAGATCGTGTTGCTTAGATTGCAAGTTATTAACTACTTTTGCTTAATATTTAATCTTTGATTGGTTGGATTATATTATCTATAAGTATGAACAAAGACTAATTCTATAGTTAAGTTTACCTAATACTGGTGAAGTTGTTGGGCGGATCGCTCTCAGTACACGTACCCCTTGATAGAAGAAGCTTTTGAATTTATTTTCTAATGTGAACATGTAGGATTATAATGCCACTGTGGAATTTTACTGGGCTCCATTTCTGGTGGAGTCAAATTCAGATGATCCAAACATGCATAGTATATTGAACAGGATCATCATGCCTGAATCAATTGAAAAGCATGGAAAGAACTGGAAGAATGTCGATTATCTTGTCTTCAACACCTACATTTGGTGGATGAATACGTTTGCCATGAAAGTTCTGTAAGTAATTATACTCAACTTGATGTGTTCTATTCCTCTGCTGCATACAGTACTTAGGTTTGATATTATTGTATTAGACGAGGGTCGTTCGATGAAGGAGCCACAGAATACGATGAGATTGAAAGACCAGTTGCTTATCGGAGAGTTTTGACAACATGGTCACAATGGGTGGAAAACAATGTGGATGTCAATAGCACAAAAGTCTTCTTCATGAGCATGTCTCCTCTTCATATCAAGTAATCCCCATTTCCTTTCGCGTTTTATCCATTTGGTACATCTCATATCAACATTTTAACTCTCAAACGTTATGCAATAGTAACATATTTGGGCTTGGTTAACTGTCTGCAGGAGTTTGGATTGGAACAATCCTGATGGGATAAAATGTGCAAAAGAGACAACCCCAGTGTTAAACACATCAATGCCGCTAAGTGTTGGGACAGACAAGAGACTATTTGTAGTAGCAGCAAATGTTACTCAATCCATCAATGTCCCTGTTTACTTCCTCAATATCACCTCCCTATCAGAGTACAGGAAAGACGCGCACACCTCTGTCCACACCATTCGACAAGGCAAAATGCTGACAGCGGAGCAGAAAGCTGATCCAACCACCTATGCTGATTGTATTCATTGGTGCCTCCCTGGATTGCCTGATACTTGGAACGAATTCCTCTATTCGCGAATTTTATCCCATTCTTAACACTAGGTACTATATAACAAATGGTGTCCCGTCATTTCACCGGACATCTGTCATCTCAATTGATCGATCATTGTGCAGTTTCTACATTCTTTAGGGGTTTAAGAACCACTATTTTTTTTTGCTGTCATTGTTATCTTTTTCCTTAAGAAAAGGAAAAATCCTGTAGCTGTGATTTGCCCTGAATTTTATGGTGGTACCAAAGATGTTGTTGGGCTTTTGTAGTGGTTCCCCCAGTTGGGTAAACATCATTTGTTAATCATTGTATTATGGAAGAAAATAAATGAATAATATATACCCAACTAACAATATA

Download sequence region

Download sequence (2.3Kb)

Get flanking sequences on SL2.50ch03

mRNA Solyc03g096030.2.1

Ontology terms

None

terms associated with this mRNA

cDNA sequence

spliced cDNA sequence, including UTRs

>Solyc03g096030.2.1 Os03g0291800 protein (Fragment) (AHRD V1 **-- Q0DSS4_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant
TACTCTTCTCTTCCTCTATATTTCCTATTCTCATCTCACCATTAATAACACCCATACTCATTTCTCATGTATTCATCACTTCGTAGTCGTAAAACCCCTCTTTTCTTCTCCTCCAATTTACTCAAGATGAAGCATAATGCCCGCAAGAACAATCATTTTTCCATATTCGTTGTCGTTTTCTCCATATTCCTCTTTGGATGCTTCATGTACAATGAAGACGTCAAAACTATTGCGGAATTCCCATTTTCAATGACTAGAAATCAAGATATCTACACTCCACCTTTGAATCAACAAAATGGGGTTCAAGAAATTGAGACTAAGGTAGTAATGAATTCAAGAACAGAGCAAGAAACAGAGCAAGAGAAGGAAAAAATTGAAATCCCCGCTGAAGAAGAAGAGGAAGAGGAGAGTATTGAATTGCCACCAGAAGATTGTGATCTTTTTACAGGGCAATGGGTTTACGATAATGTAACACACCCAGTTTATAAAGAACCAGAATGTGAGTTTCTTACAGCACAGGTAACTTGTATGAGAAATGGAAGGGAGGACTCCATGTATCAGAACTGGAGGTGGCAACCCAGAGACTGTTCTTTACCCAAGTTTAAAGCAAAGTTGCTGCTTGAGAAACTGAGGAACAAGAGACTCATGTTTGTCGGAGACTCGCTCAACAGAAATCAATGGGAATCCATGATTTGTTTGGTTCAATCTGCAGTTCCTTCAGGCCGAAAAAGCTTAAACAAGACTGGTTCTTTGTCTGTTTTCAGAATTGAGGATTATAATGCCACTGTGGAATTTTACTGGGCTCCATTTCTGGTGGAGTCAAATTCAGATGATCCAAACATGCATAGTATATTGAACAGGATCATCATGCCTGAATCAATTGAAAAGCATGGAAAGAACTGGAAGAATGTCGATTATCTTGTCTTCAACACCTACATTTGGTGGATGAATACGTTTGCCATGAAAGTTCTACGAGGGTCGTTCGATGAAGGAGCCACAGAATACGATGAGATTGAAAGACCAGTTGCTTATCGGAGAGTTTTGACAACATGGTCACAATGGGTGGAAAACAATGTGGATGTCAATAGCACAAAAGTCTTCTTCATGAGCATGTCTCCTCTTCATATCAAGAGTTTGGATTGGAACAATCCTGATGGGATAAAATGTGCAAAAGAGACAACCCCAGTGTTAAACACATCAATGCCGCTAAGTGTTGGGACAGACAAGAGACTATTTGTAGTAGCAGCAAATGTTACTCAATCCATCAATGTCCCTGTTTACTTCCTCAATATCACCTCCCTATCAGAGTACAGGAAAGACGCGCACACCTCTGTCCACACCATTCGACAAGGCAAAATGCTGACAGCGGAGCAGAAAGCTGATCCAACCACCTATGCTGATTGTATTCATTGGTGCCTCCCTGGATTGCCTGATACTTGGAACGAATTCCTCTATTCGCGAATTTTATCCCATTCTTAACACTAGGTACTATATAACAAATGGTGTCCCGTCATTTCACCGGACATCTGTCATCTCAATTGATCGATCATTGTGCAGTTTCTACATTCTTTAGGGGTTTAAGAACCACTATTTTTTTTTGCTGTCATTGTTATCTTTTTCCTTAAGAAAAGGAAAAATCCTGTAGCTGTGATTTGCCCTGAATTTTATGGTGGTACCAAAGATGTTGTTGGGCTTTTGTAGTGGTTCCCCCAGTTGGGTAAACATCATTTGTTAATCATTGTATTATGGAAGAAAATAAATGAATAATATATACCCAACTAACAATATA

Download sequence (1.8Kb)

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc03g096030.2.1	SL2.50ch03:57841723..57843681	471	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc03g096030.2	SL2.50ch03:57841414..57843747	2,334	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc03g096030.2.1.1	SL2.50ch03:57843149..57843747	599	-	1
exon	exon:Solyc03g096030.2.1.2	SL2.50ch03:57842904..57843075	172	-	n/a
exon	exon:Solyc03g096030.2.1.3	SL2.50ch03:57842421..57842620	200	-	1
exon	exon:Solyc03g096030.2.1.4	SL2.50ch03:57842185..57842343	159	-	1
exon	exon:Solyc03g096030.2.1.5	SL2.50ch03:57841414..57842072	659	-	n/a
intron	intron:Solyc03g096030.2.1.2	SL2.50ch03:57843076..57843148	n/a	-	n/a
intron	intron:Solyc03g096030.2.1.3	SL2.50ch03:57842621..57842903	n/a	-	n/a
intron	intron:Solyc03g096030.2.1.4	SL2.50ch03:57842344..57842420	n/a	-	n/a
intron	intron:Solyc03g096030.2.1.5	SL2.50ch03:57842073..57842184	n/a	-	n/a

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Related views

Genetic loci

Tomato locus Solyc03g096030

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17765496%2Fdetails feature 17765496

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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