Solanum lycopersicum mRNA Solyc03g093640.2.1

mRNA details  
Name
Solyc03g093640.2.1
Type
mRNA
Length
2,408
Organism
Solanum lycopersicum
Description
Polycomb group protein EMBRYONIC FLOWER 2 (AHRD V1 **-- EMF2_ARATH); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type
Location(s)
SL2.50ch03:55178355..55208511
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005622
Length
30157
Nb exon
22
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g093640.2.1 Polycomb group protein EMBRYONIC FLOWER 2 (AHRD V1 **-- EMF2_ARATH); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type

ACTTGACCCTGCCCCAAAACGCCTCTGGTTGAGCGGTCAAAGTTCGAACCGAAACCAAGAACGGATCCTAAAATCCGACTGATTCAGGCCCGCCAATCTCAAACGGCACCGGTCTTCTTCTTCTTCCGGCGAATCGACAGAGAGAGCACCTTCCTCCATCATCTTCGGCGAAATCCAGTTTGAAGTTGAAAGAACTATGAATATACATTTGAATACTTTGTGACAAGGATGCCAGGCATACCTTTAGTGGCTCGTGAAACCACGAATTACACTTGCTACTGCAGTTACTCTACAGCCACGGATTCAATGTGCAGGCAAGATTCTGCTACACATTTGTCTGCAGAGGAGGAGATTGCTGCTGAAGAAAGCCTTTCAAGTTATTGCAAACCTGTTGAACTCTACAATATTCTCCAACGCCGTGCTGTTAGAAATCCTTCATTCCTTCAAAGATGCTTACAGTACAAAATTCAAGCAAAGCACAAAAGAAGGATTCAAATGACAATATCTGTGCCAGCAACTGTCAGCGATGAATCACAGGTCCAGAATTTGTTTCCTTTGGGTGTAATTTTGGCAAAGCCACTATCAAGTGCTGCAGCTGCTGAGGGACATTCTGCTGTCTATCAGTTTAAGCGGGCATGCATGTCTACCTCATTCAGTGGAGTTGATGGGATAAATCGCGCTCAAGCAAAATTCATTCTCCCTGAAATGAATAAACTCTCTGCTGAAATAAGGGCCGGCTCTCTTGTCATCCTGTTTGTCAGCTTTGCCGAACTTGCCAGAGATCGTGGGGATATATCTTCATTTCCATTGAATCTTGAAGGGCACTGCTTGTTGGGCAGAATGCCGATGGAATTACTTCATTTGTTGTGGGACAAGTCTCCCAATTTGAGTTTAGGGGAGAGAGCTGAGATGTGGTCGACTGTTGACTTGAACCCTTGTTTCATGAAGACAAGCTCTTTGGACAAAGACAGACACATTAGCTTTGAGTATCCCCGCAGTTCTGCGGCTCTGGCGACAATACAACAATTACAAGTTAAAATTGCTTCGGAAGAAGCTTTTGCAAGAGAAAGAACACGATATGATTCATTCTCCTATGATGACATTCCTTCAACTTCATTGGCTCGAATAATACGGTTAAGGACAGGAAATGTTGTTTTCAACTATATGTACTATAACAATAAGTTGCAGAGGACAGAAGTGACAGAGGACTTCACCTGTCCTTTTTGCTTGGTAAAATGTGTCAGTTTTAAGGGTTTGAGATATCACTTATGCTCATCCCATGATCTGTTCAAATTTGAATTTTGGGTAAATGAAGAATATCAAGCTGTAAATGTGTCTGTGAGAAGTGAGATGTGGAGATCTGAGATTGTTGCTGATGGTGTGGATCCTAAGCAACAAACATTCTTCTTTTGTTCAAAGCCACTAAGACGGAGGGAACAGCCAGATTTAGTTCAAAATTCAAAGCATGTGCACCCACTTGTTTTAGATTCAGATTTCCCTTCAATGAATGATCTCAATGGAAGGACTAATGGTGTTGCGGACGCTGTGGAGTGTGATCCTTCAAGTTCCAATGGTGCTAGTGTTCCCTCATCCGGTAACTTGTATACAGATCCTGATTCTGTTCAGTCAGCATCAGGAAGCACTCTTGCACCCCCAGCACTGCTTCAGTTTGCTAAGTCAAGAAAGTTATCAGTTGAGCGCTCTGATCCCAGAAATCGTGCACTCCTGCAAAAAAGGCAATTCTTTCATTCTCATAGGGCCCAGCCCATGGCACTGGAGCAAGTTTTATCGGACCGAGACAGTGAGGATGAAGTTGATGATGATGTTGCAGATCTTGAAGATCGAAGGATGCTTGATGATTTTGTGGATGTGACCAAAGATGAAAAGCAAGTGATGCATCTGTGGAACTCATTTGTTAGAAAGCAAAGGGTGTTGGCAGATGGTCATATCCCTTGGGCATGTGAGGCCTTTTCAAAGCTGCATGGTCAGAGGTTTGCCCAAGCACCAGCCACACTATGCAGGTGTTGGAGATTATTCATGATGAAGCTGTGGAACCATGGCCTTGTTGATGCGCGTACAATTAACAATTGTAACCTAATATTAGAGCAGTTCCAAAACCAAGACAGTGATTCTACTAGAAGCTGAATACCCGTTTGACAATTTGTTACCATCTAGCAATGGATTTGGTAGAGATGCAGCTTTTGTGGCTGGAGCTGCATCTCGGAATTTTCAACATCAGTTTGTCTAATGTTATTGTGGCTAGATGACTCTTCTGTCTTTTAAGAGTAAGATATGCTAAAATTAATGTTTTATAGGGCACATATAGAGGCATCTGTTGTTCTAAATTGGAAATCAATGATTCACATTGTTCAGAGGCTATGTTATATCTTGAATCTGGTTCTTTTTAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g093640.2.1SL2.50ch03:55178617..55206133639-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g093640.2SL2.50ch03:55178355..5520851130,157-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g093640.2.1.1SL2.50ch03:55208332..55208511180-n/a
exonexon:Solyc03g093640.2.1.10SL2.50ch03:55199981..55200102122-1
exonexon:Solyc03g093640.2.1.11SL2.50ch03:55199156..5519922065-2
exonexon:Solyc03g093640.2.1.12SL2.50ch03:55198351..5519840353-n/a
exonexon:Solyc03g093640.2.1.13SL2.50ch03:55198152..5519820554-n/a
exonexon:Solyc03g093640.2.1.14SL2.50ch03:55198011..5519807060-n/a
exonexon:Solyc03g093640.2.1.15SL2.50ch03:55197502..5519754847-1
exonexon:Solyc03g093640.2.1.16SL2.50ch03:55197281..55197399119-2
exonexon:Solyc03g093640.2.1.17SL2.50ch03:55192793..55192976184-1
exonexon:Solyc03g093640.2.1.18SL2.50ch03:55191653..5519170149-n/a
exonexon:Solyc03g093640.2.1.19SL2.50ch03:55183863..5518394684-n/a
exonexon:Solyc03g093640.2.1.2SL2.50ch03:55206099..5520618183-1
exonexon:Solyc03g093640.2.1.20SL2.50ch03:55180675..5518075480-1
exonexon:Solyc03g093640.2.1.21SL2.50ch03:55179256..5517934590-1
exonexon:Solyc03g093640.2.1.22SL2.50ch03:55178355..55178744390-n/a
exonexon:Solyc03g093640.2.1.3SL2.50ch03:55205804..55205972169-n/a
exonexon:Solyc03g093640.2.1.4SL2.50ch03:55205320..5520537556-1
exonexon:Solyc03g093640.2.1.5SL2.50ch03:55202994..55203111118-n/a
exonexon:Solyc03g093640.2.1.6SL2.50ch03:55202749..55202908160-2
exonexon:Solyc03g093640.2.1.7SL2.50ch03:55202629..5520267042-2
exonexon:Solyc03g093640.2.1.8SL2.50ch03:55201360..55201499140-n/a
exonexon:Solyc03g093640.2.1.9SL2.50ch03:55200217..5520027963-n/a
intronintron:Solyc03g093640.2.1.10SL2.50ch03:55200103..55200216n/a-n/a
intronintron:Solyc03g093640.2.1.11SL2.50ch03:55199221..55199980n/a-n/a
intronintron:Solyc03g093640.2.1.12SL2.50ch03:55198404..55199155n/a-n/a
intronintron:Solyc03g093640.2.1.13SL2.50ch03:55198206..55198350n/a-n/a
intronintron:Solyc03g093640.2.1.14SL2.50ch03:55198071..55198151n/a-n/a
intronintron:Solyc03g093640.2.1.15SL2.50ch03:55197549..55198010n/a-n/a
intronintron:Solyc03g093640.2.1.16SL2.50ch03:55197400..55197501n/a-n/a
intronintron:Solyc03g093640.2.1.17SL2.50ch03:55192977..55197280n/a-n/a
intronintron:Solyc03g093640.2.1.18SL2.50ch03:55191702..55192792n/a-n/a
intronintron:Solyc03g093640.2.1.19SL2.50ch03:55183947..55191652n/a-n/a
intronintron:Solyc03g093640.2.1.2SL2.50ch03:55206182..55208331n/a-n/a
intronintron:Solyc03g093640.2.1.20SL2.50ch03:55180755..55183862n/a-n/a
intronintron:Solyc03g093640.2.1.21SL2.50ch03:55179346..55180674n/a-n/a
intronintron:Solyc03g093640.2.1.22SL2.50ch03:55178745..55179255n/a-n/a
intronintron:Solyc03g093640.2.1.3SL2.50ch03:55205973..55206098n/a-n/a
intronintron:Solyc03g093640.2.1.4SL2.50ch03:55205376..55205803n/a-n/a
intronintron:Solyc03g093640.2.1.5SL2.50ch03:55203112..55205319n/a-n/a
intronintron:Solyc03g093640.2.1.6SL2.50ch03:55202909..55202993n/a-n/a
intronintron:Solyc03g093640.2.1.7SL2.50ch03:55202671..55202748n/a-n/a
intronintron:Solyc03g093640.2.1.8SL2.50ch03:55201500..55202628n/a-n/a
intronintron:Solyc03g093640.2.1.9SL2.50ch03:55200280..55201359n/a-n/a
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