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Solanum lycopersicum mRNA Solyc03g031670.2.1

mRNA details  
Name
Solyc03g031670.2.1
Type
mRNA
Length
2,206
Organism
Solanum lycopersicum
Description
Calcium-dependent protein kinase (AHRD V1 **** Q8RW36_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch03:4117144..4125810
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0005509
Length
8667
Nb exon
9
Sifter term
GO:0004683
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g031670.2.1 Calcium-dependent protein kinase (AHRD V1 **** Q8RW36_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

TGCAAGTGGGGAAAAAGCCTAGAAAAATAACAAGGGCAAAAGCTGGCAAAGAAAGTGTGTAGCATTTTCATGGAGTTTTTTCCCATGAAGTCAATGAAGAGGGTTCAAAACGTTGGCATTTTCTGATCTGTGGAATATCTTTTAGGTTGTTGTTTTTTTTGTAACTTGTTGAGGAATTGAAGTATCCAAAGTTCAATCTTGTTGAATAGACTGTAGAAATGGGTGGTTGTTTTAGCAAGAAGTATACCCAACAAGATGCTAATGGGCATAGGGCAGGAAGAAGAGTTAATCAAGCATATCAAAAACCACCACAACCCCAGCCAGAAAGGCCATATCAGCCTCAGCCCCAGCAGGAAAGGCCATATCAGCCACCGCCACAGCCAGCATATCAGCCACCGCCACAGCCAAAGCCACAACCTCAGCCCCACCCTGTTCCTGTTACTGTGCAGTCTGGACAGCCCCAAGACCAAATGCAAGGACCCCATATGAATAACATATTGGGAAAGCCTTTTGAGGAAATTAGAAAGCTCTATACACTTGGGAAAGAATTGGGTAGGGGTCAGTTTGGAGTGACTTACTATTGTACTGAGAACTCAACTGGGAACCCTTATGCTTGCAAGTCCATACTTAAGAGGAAGCTTGTAAGCAAGAATGATAGGGAGGATATGAAGAGGGAAATTCAGATTATGCAGCATTTGAGTGGGCAGCCAAACATTGTGGAATTCAAGGGTGCTTATGAAGATAGGCAGTCAGTACACCTTGTGATGGAACTTTGTGCTGGAGGAGAGTTGTTTGACAGGATTATCGCCCGTGGATATTACTCAGAGAAGGATGCTGCTGAGATTATTAGACAGATTGTAAATGTTGTTAACATTTGCCATTTCATGGGTGTCATGCATAGGGATCTCAAGCCAGAGAATTTCTTACTGACTAGTAAGGATGAAAATGCTATGTTGAAGGCAACTGATTTTGGACTTTCTGTCTTCATTGAAGAAGGGAAGGTGTACCGTGATATAGTTGGTAGTGCATATTATGTTGCCCCTGAAGTGTTGCGGCGTAGTTATGGGAAGGAAGCAGATGTATGGAGTGCAGGTGTTATTTTGTATATTCTGCTCAGTGGTGTACCTCCATTTTGGGCTGAAACTGAAAAGGGAATATTTAATACCATACTAAAAGGAGAAATTGACTTCCAAAGTGATCCATGGCCATCAATATCAAATAGTGCCAAGGACCTTATTCGGAAAATGCTAACGCAGGAGCCAAGGAAGAGAATTACTTCCGCGCAAGTTCTTGAACATCCATGGCTTCGACTTGGAGAAGCATCAGATAAGCCAATAGACAGTGCAGTCCTGTCCAGAATGAAGCAGTTCAGAGCAATGAACAAGCTCAAAAAACTCGCATTGAAGGTCATTGCGGAAAATTTATCTGAAGAAGAAATCAAGGGTCTGAAAGCTATGTTTCACAACATTGATACGGACAATAGTGGCACAATCACTTATGAAGAACTGAAGTCGGGATTGGCTCGGCTTGGATCAAAGCTAACGGAGACTGAAGTCAAGCAACTCATGGAAGCTGCTGATGTGGATGGAAATGGATCAATTGATTACATTGAGTTTATTACTGCAACGATGCATAGACATCGGCTAGAAAGGGATGAGCATCTTTTTAAAGCTTTTCAGCATTTTGACAAGGACCATAGTGGATTCATCACGCGAGATGAATTGGAAAACGCTATGAAGGAATATGGTATGGGTGATGAGGCCACCATCAAGGAGATAATCGCAGAGGTGGACACTGACAATGACGGTAGGATCAATTACGAGGAGTTCTGTGCTATGATGAGAAGTGGAACAACACAACCACAACAAAAGCTTTTCTAGTGCATCGAGAGCAAATTACCCTTGCAACGAGCAGAGAACGTTCACCAGCCAGCACGATGGAGAGATGTCTATCACGAGAGGATCAGTAACTTAACATACTTCCATATTTCTTCAATCCTTCAGCTATCTTCAAAAAGCACTGGAGTACATGAGACCTTTTTCGTGTAGGTTGAGTTCGCGTGGAAAATGTGTGTATAGCTAGTTAATGGTATATTTCGAGTTTCTTGTAATGTATTTGATCCCCCTTCGTAATTTTGTGTGGATCGCGTTGTGAAGTTGACCTCCCGTAGAGATTATAACAAGACAATCTGAATATAGCTTTATGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g031670.2.1SL2.50ch03:4117469..4125270554-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g031670.2SL2.50ch03:4117144..41258108,667-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g031670.2.1.1SL2.50ch03:4125666..4125810145-n/a
exonexon:Solyc03g031670.2.1.2SL2.50ch03:4124493..4125343851-2
exonexon:Solyc03g031670.2.1.3SL2.50ch03:4121641..4121784144-2
exonexon:Solyc03g031670.2.1.4SL2.50ch03:4121391..4121543153-2
exonexon:Solyc03g031670.2.1.5SL2.50ch03:4119700..4119812113-n/a
exonexon:Solyc03g031670.2.1.6SL2.50ch03:4119313..4119480168-n/a
exonexon:Solyc03g031670.2.1.7SL2.50ch03:4119101..4119228128-1
exonexon:Solyc03g031670.2.1.8SL2.50ch03:4117628..4117727100-n/a
exonexon:Solyc03g031670.2.1.9SL2.50ch03:4117144..4117547404-n/a
intronintron:Solyc03g031670.2.1.2SL2.50ch03:4125344..4125665n/a-n/a
intronintron:Solyc03g031670.2.1.3SL2.50ch03:4121785..4124492n/a-n/a
intronintron:Solyc03g031670.2.1.4SL2.50ch03:4121544..4121640n/a-n/a
intronintron:Solyc03g031670.2.1.5SL2.50ch03:4119813..4121390n/a-n/a
intronintron:Solyc03g031670.2.1.6SL2.50ch03:4119481..4119699n/a-n/a
intronintron:Solyc03g031670.2.1.7SL2.50ch03:4119229..4119312n/a-n/a
intronintron:Solyc03g031670.2.1.8SL2.50ch03:4117728..4119100n/a-n/a
intronintron:Solyc03g031670.2.1.9SL2.50ch03:4117548..4117627n/a-n/a
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