Sol Genomics Network

Solanum lycopersicum gene Solyc02g093440.2

Name Solyc02g093440.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc02g093440	Length 3,392

Description

GHMP kinase family protein (AHRD V1 ***- D7L9M7_ARALY); contains Interpro domain(s) IPR014721 Ribosomal protein S5 domain 2-type fold

Location(s)

SL2.50ch02:54315676..54319067

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3392

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc02g093440.2.1	SL2.50ch02:54315676..54319067	1,428	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc02g093440.2 SL2.50ch02:54315676..54319067
CGCTGTAGATTCCAATATCTGCCGTAACAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTGGTATTCTATCTTATACTTCTCCTTTATTCATCTGTTTTACTTATACTGTTTTCGGTTATCAGGATATATTAGAATTATTGACATGCCAATGCGTTTATACTTTGGGATGCGTTTATCAGGATATATAATTGATGTTTAATTAATCATTGATTAGCCAATTCTGATTGGTATTTTCATAATCAAGATCAGAAATTTAACACTTTTTTTTTAGTTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAGGTAGAACCTAACATTGCAAGATTTATCTGCCCTTCGATAGATAAGTTATGTGGATTGGAATCACGTTAGCTAATTGTTGTTAAACTCTTACTAAACGTTCTTTGACTTGAAACTGCTCAAATATAGAGTGAGCTTCTGTTTATATGGTCCTATTGTTTGGTTTTGGAAATGTCTTTTCGTAGGTTTACAATTTATCTAAAATGTCTTAGTCGAGTAAAATAATTCTTTAATTTCAACCAGGCACAATCAAAACCTACATCTCGGACGTTGAAACTTTACATACTACCTTCTGGATTTTAGCTATGCAAATAAATTAGGAGTGAAATACATGCTTGTTTCAATCATAACTGACATTACATCACACTACTTCATGATCATGATCTGAATATGGCATTGCTATATGATGAATAAGATAAATAAAAGATTTGATTTATCTCATGTTGAAAAAGTTTGATTAACATATCAAATACTTTCCACATCTCAGACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATGGTGTGTATGTGTGATACTCTTTTTTATCTTTGACAAGTAGCTTGTAGTTGTAAAGTAAATATTGCATGTTCATCTTTAAACCTTTATTTTGCAGGACTTTGACAAGAATCACATGGATGAATTAGGTCATGGCATATATACACCCATGGATGTTGATCTTCTCCCACCTCTTTATCTGATCTATGCAGAAAATCCCAGTGATTCTGGAAAGGTTTGAACTTAATGTGCAGAATATGAGTGAAAAATCTCTGTTGTCTGGCCAAAGATTCTATAGATGAGTGTTATTTGCTTAGCCATGCAATGGGTTAGAATATTACATTTTGGTTTTCACTTCACACTAAGAATTAGACAACGAGTATTGATGTAGGCTTATAGTCCACGGGGCAGCCCCTTTATTTTCAGTAATTATTTAACAGGGTAACCTCTTATATGATTCCAGTATTTATTGAATATTTTCCAGACAATGGATGACATAACAATTGCAGCAGTTTCTCAAGGAATTGTGAATATCAGTGTCCGGATTAACTTTGTCACTAATAGTTACTTTGTTGACAGTAGTTACAAAATATAGATGATACTTTTTTTTCAAATGCAGGTACATAGTACAGTTCGACAAAGATGGTTAGATGGTGATAAATTTATAAGATCAACCATTGAAGAGGTTGCAAATATAGCTGTGGAGGGACGGAAAGCTCTTCTTGAGAAGGACTACAATAAGTTAGCAGCCCTCATGAATCACAATTTTGACTTGAGAAGGTAATATACATGCTTAGTTTAATGAGGGTTACATTTGTTAATATCTTTTATGTGCTTCGTGGCGTCCCCAACACCTATTTGATAGTGTCATGTGTCATGACCTGCCACCTTACCCTTCAAATTTTGCACTGGAAGAGGGGACGAAGAACCTAAAGTTGTGGAGAGGTCAGTGGAAGACTCTAGAATAACTTAGAAGATATCGTAGAAAGCTTTAGAATTCTCTAGACTAGTAGAGAATTCTAGAGCATGGACTAAAGTATAAATAAGAGTGATATGTGAAGTAAATATTATTTACTAGGTCCTAGGAAGTAGTATAAATAGAAGGGTCTCTCATTTGGAAGGCTTCCAAGAAGCAAGCAATCACTCAAGTTGTAAATAATGTTTCGAGCAATACAAAACCTTCTTATAAAACTCTCTTGTCTTTCTTTTCATTCTCTTAGCGACCTTAAGTGTAAATGACTTACTTGAGCTTACAAGACCTTGAAAGATTAGTGAGTAAGTAGTCGAGTGCTGGCTTTAGTGAGACTCTCTTAGTCCATGACAATATCATGACCCATTTGTTTTCATGTTATTACTTGTAACAATTTCATGTGCTGTCACAATGCACTTTTACCTCCCTTTTGCATCTTATTTCATGGTGTTATGATATACTCAAATATTGCTAAGATTTTATCACAGAAAGCAGGTAATATGATATGCAAATGGAATACTTTAATATTGTGGGTCTACTATGTAGGCGTATGTTTGGAGATAATGCCCTTGGAGCTATGAATATAGAGATGGTTGAAATCGCTCGAAAGGTAGGTGCTGCTTCCAAGTTCACAGGAAGTGGTGGGGCTGTGGTTGTGTACTGTCCGGATGGAACTTCACAAGTGAAGCAGCTGGAGGACGCATGCCACAAAGCTGGTTTCACTTTTCAACCAATTAAAGTTATGCCTTCGTTTCTAAACGAAACTGATCTTCAAACTCTGAAATCAAAGTGAAAATGATGATCTGCTTTCAAATATGTCGAGAGTCCTCTTTATTCTTTATTTCTTTCACCTTTCATTGGCATATGCTAAGCGCTTTTCACCAAGTATGTAGCGACCATTGAAAGAAATGCTAGTATAGATAGTTTTAGTTACAATTGTTTTGCTGCTATTGTAATGCATTTCGAGAAGCGCTTACTTTACAGTTTTAGCGTAAACCGTCATTAGATTCACATATTTTAACTCCAATTGTGTGATGCCAATTATAATTACTACTAAATCTGTTACTTCT

Download sequence region

Download sequence (3.4Kb)

Get flanking sequences on SL2.50ch02

mRNA Solyc02g093440.2.1

Ontology terms

terms associated with this mRNA

GO:0004335 – galactokinase activity

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc02g093440.2.1	SL2.50ch02:54315764..54318790	354	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc02g093440.2	SL2.50ch02:54315676..54319067	3,392	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc02g093440.2.1.1	SL2.50ch02:54315676..54315962	287	+	n/a
exon	exon:Solyc02g093440.2.1.2	SL2.50ch02:54316229..54316378	150	+	n/a
exon	exon:Solyc02g093440.2.1.3	SL2.50ch02:54316863..54317051	189	+	n/a
exon	exon:Solyc02g093440.2.1.4	SL2.50ch02:54317146..54317262	117	+	n/a
exon	exon:Solyc02g093440.2.1.5	SL2.50ch02:54317647..54317807	161	+	n/a
exon	exon:Solyc02g093440.2.1.6	SL2.50ch02:54318544..54319067	524	+	n/a
intron	intron:Solyc02g093440.2.1.1	SL2.50ch02:54315963..54316228	n/a	+	n/a
intron	intron:Solyc02g093440.2.1.2	SL2.50ch02:54316379..54316862	n/a	+	n/a
intron	intron:Solyc02g093440.2.1.3	SL2.50ch02:54317052..54317145	n/a	+	n/a
intron	intron:Solyc02g093440.2.1.4	SL2.50ch02:54317263..54317646	n/a	+	n/a
intron	intron:Solyc02g093440.2.1.5	SL2.50ch02:54317808..54318543	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc02g093440

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17746148%2Fdetails feature 17746148

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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