Solanum lycopersicum mRNA Solyc02g092700.2.1
mRNA details
|
| Name | Type |
Length
1,693
|
Organism |
| Description |
|
Location(s)
SL2.50ch02:53693257..53696807
|
|
GFF source
ITAG_eugene
|
- Length
- 3551
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc02g092700.2.1 Ycf36 protein (AHRD V1 *-*- D4ZSA0_SPIPL); contains Interpro domain(s) IPR009631 Protein of unknown function DUF1230
GTGGTATGACTTTAACTTGATCCAACCTAACCTTCTAATTTAAGACTTTTATACTCCCTTCATTCCAAAAATAATTTTCGTCTTTTTATCATCCCAAATTATTTGTCTAAGTTTAAAACAAAATTAAGTTAGTATTGTTTTTCAAATAGGAATCAGAGAGAGCACAAAAGAACTCGTGGAACAATGAGAAATGAAGGTAACAGTGGTGTGCAAGGATAATCTTTCCACGTTGCAACACAAGTTACCCACGAATTTGCTTTGAGTACCACAAAAAATGCTTCATATTTATTTACAATCTATAATTCAAGATAATCCTATGTAGGAGCCACATAAGTGGACCACAACGTTTAAACTGGTGGTCGAACACACACAATCCAAAAGAGCAGCTCTCAGTTGGCTGATTCTAATTGGACAAAGATAAGAAATTATAAAGATCGTCATTTTTGGGGGAGATAACAGAGAATATTCAACTACTGATAATTTTCCATCACGTATGATGCATGGTCAAAAAAAAAAAAGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCGGTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAGGATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTGGGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAGATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAGGTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAGGAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGCGCATGCAAAGAACAAAAGAAAGAGAATCATAACCCAAAATGTTAACACCATCATTGAG
GTGGTATGACTTTAACTTGATCCAACCTAACCTTCTAATTTAAGACTTTTATACTCCCTTCATTCCAAAAATAATTTTCGTCTTTTTATCATCCCAAATTATTTGTCTAAGTTTAAAACAAAATTAAGTTAGTATTGTTTTTCAAATAGGAATCAGAGAGAGCACAAAAGAACTCGTGGAACAATGAGAAATGAAGGTAACAGTGGTGTGCAAGGATAATCTTTCCACGTTGCAACACAAGTTACCCACGAATTTGCTTTGAGTACCACAAAAAATGCTTCATATTTATTTACAATCTATAATTCAAGATAATCCTATGTAGGAGCCACATAAGTGGACCACAACGTTTAAACTGGTGGTCGAACACACACAATCCAAAAGAGCAGCTCTCAGTTGGCTGATTCTAATTGGACAAAGATAAGAAATTATAAAGATCGTCATTTTTGGGGGAGATAACAGAGAATATTCAACTACTGATAATTTTCCATCACGTATGATGCATGGTCAAAAAAAAAAAAGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCGGTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAGGATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTGGGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAGATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAGGTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAGGAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGCGCATGCAAAGAACAAAAGAAAGAGAATCATAACCCAAAATGTTAACACCATCATTGAG
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc02g092700.2.1 | SL2.50ch02:53693438..53696232 | 312 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc02g092700.2 | SL2.50ch02:53693257..53696807 | 3,551 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc02g092700.2.1.1 | SL2.50ch02:53696005..53696807 | 803 | - | n/a |
| exon | exon:Solyc02g092700.2.1.2 | SL2.50ch02:53695367..53695519 | 153 | - | n/a |
| exon | exon:Solyc02g092700.2.1.3 | SL2.50ch02:53695113..53695190 | 78 | - | n/a |
| exon | exon:Solyc02g092700.2.1.4 | SL2.50ch02:53694849..53694944 | 96 | - | n/a |
| exon | exon:Solyc02g092700.2.1.5 | SL2.50ch02:53693974..53694009 | 36 | - | n/a |
| exon | exon:Solyc02g092700.2.1.6 | SL2.50ch02:53693679..53693860 | 182 | - | 1 |
| exon | exon:Solyc02g092700.2.1.7 | SL2.50ch02:53693257..53693601 | 345 | - | n/a |
| intron | intron:Solyc02g092700.2.1.2 | SL2.50ch02:53695520..53696004 | n/a | - | n/a |
| intron | intron:Solyc02g092700.2.1.3 | SL2.50ch02:53695191..53695366 | n/a | - | n/a |
| intron | intron:Solyc02g092700.2.1.4 | SL2.50ch02:53694945..53695112 | n/a | - | n/a |
| intron | intron:Solyc02g092700.2.1.5 | SL2.50ch02:53694010..53694848 | n/a | - | n/a |
| intron | intron:Solyc02g092700.2.1.6 | SL2.50ch02:53693861..53693973 | n/a | - | n/a |
| intron | intron:Solyc02g092700.2.1.7 | SL2.50ch02:53693602..53693678 | n/a | - | n/a |
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mRNA details
mRNA details

