Solanum lycopersicum mRNA Solyc02g088610.2.1

mRNA details  
Name
Solyc02g088610.2.1
Type
mRNA
Length
3,386
Organism
Solanum lycopersicum
Description
ATP-dependent chaperone ClpB (AHRD V1 **** B5W0X8_SPIMA); contains Interpro domain(s) IPR017730 Chaperonin ClpB
Location(s)
SL2.50ch02:50644342..50651409
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0019538
  • GO:0005524
  • GO:0005737
  • GO:0017111
Length
7068
Nb exon
10
Sifter term
GO:0004176
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g088610.2.1 ATP-dependent chaperone ClpB (AHRD V1 **** B5W0X8_SPIMA); contains Interpro domain(s) IPR017730 Chaperonin ClpB

TATATATTAATTTGCATAAAAAAAATATATAAAATACACGTTAAAAAATGAAAGATATCATAGTAAAAATTTTCACACGCGCTCTCACGTTCGGGAAGTTACGAGAAGAGTCCACCGGTTCCTTATATTCTCACGCAAACCCCAAACTTTTCCGGCAAAACACTCTCTCCTATCCGCTGAAACTTTGTCGTTTTTCTTCCTTCTTCAATAACGTTGAGATAACAGAATAGTACATTTGGTTCACCGGTATGTCTACCGTGACGTCATTTTCCGGCGTACAGTTTTGCGTTCCTTCTTCTTCTTCCAATTCTTCAAACAGAGTTGCTTTATTTTCATCCCATTCAGCGCCGTACCTGAACTTCTCAGGCAAATCGCGAGTTCTTGGCAAGTGTAGTTCGTTGAAACTGAAGAGGAAGGATGTGTTCTTCAGTAGGAAAACTGAGAAACTTTCTCAGGGCTCAAGGCTTACCGTACGTTGTGATGCTTCAAATGGAAGGATCACTCAGCAAGATTTTACAGAAATGGCATGGCAAGCAATTGTTGCATCGCCAGAAATAGCTAAAGAGAACAAGCATCAAATAGTAGAGACTGAGCACTTGATGAAGGCACTGTTGGAGCAAAAGAATGGGCTGGCTCGTCGCATATTCTCCAAGACGGGTGTAGATAATACCCGCCTTTTAGAGGCTACTGATAAGTTTATTAGACAACAACCAAAGGTTATTGGTGAGACAGCAGGTTCTATGTTAGGCCGAGAGTTGGAAGGTCTGATGCAGAGAGCCAGGGAGTACAAGAAAGAGTATGGTGATTCCTTTGTGTCAGTTGAGCATTTGGTGCTTGGCTTCATTCAAGATAAACGATTTGGGAAGCAACTGTTTAATGATTTCCAGATTTCCCTGAAGACACTGAAAACTGCCATTGAATCCATAAGGGGACGCCAAAATGTTATTGATCAAGATCCTGAAGGGAAGTATGAATCACTAGAAAAATATGGAAAAGACCTGACTGCTATGGCTAGAGCGGGGAAGCTTGACCCAGTTATAGGAAGAGATGATGAGATACGTAGATGCATACAAATCCTCTCAAGGAGAACAAAGAATAACCCAGTGTTAATTGGTGAGCCTGGAGTTGGGAAAACTGCAATCTCTGAAGGGCTTGCTCAGAGAATTGTGCAAGGAGATGTACCTCAGGCTTTGATGAATCGAAGGTTGATATCTCTTGATATGGGTGCGCTCATAGCTGGTGCAAAATATCGTGGTGAATTTGAAGACAGATTGAAGGCAGTGCTTAAGGAAGTGACAGAATCTGAAGGACAGATCATCCTTTTTATTGATGAGATACATACTGTTGTTGGTGCAGGTGCTACTAATGGTGCAATGGATGCTGGGAATCTATTGAAGCCGATGCTTGGTCGAGGAGAACTACGATGTATTGGTGCGACCACCTTGGATGAATACCGTAAATATATTGAGAAAGATCCTGCCCTGGAGCGTCGTTTCCAGCAAGTTTATGTTGACCAGCCTACAGTTGAAGACACTGTCTCCATACTTCGCGGATTACGTGAAAGATATGAGCTGCATCACGGGGTTCGCATTTCAGACACTGCGCTTGTCGACGCAGCTATTCTTTCGGACCGTTATATTAGTGGACGTTTTCTACCTGACAAAGCTATTGACCTAGTTGATGAAGCTGCTGCAAAACTGAAAATGGAGATCACCTCAAAACCTACAGCCCTTGACGAGATCAATCGTGCAGTTTTGAAGTTGGAGATGGAGAGGCTATCTCTAACTAATGATACAGATAAAGCATCGAAAGACCGGTTAAACCGTCTTGAGACTGAATTGTCTCTTCTGAAGGAGAGGCAAGCTGAGCTGACTGAGCAGTGGGAGCATGAAAAGAGTGTGATGACTCGCTTGCAGTCCATTAAGGAAGAGATCGACCGGGTAAATCTTGAGATCCAGCAAGCAGAGCGGGAATATGATCTTAATCGTGCTGCTGAACTTAAGTATGGGAGTCTAAACACCTTGCAGCGTCAACTTGAAGCTTCAGAAAAAGAACTGAGTGATTATATGAAGTCTGGAAAATCGATGCTCAGAGAAGAAGTAACTGGGAATGATGTTGCAGAGATTGTTAGTAAGTGGACTGGGATTCCTGTTTCTAAGCTACAACAGTCGGAGAGGGAAAAGCTGTTGCATTTAGAGGAAGAGTTGCACAAACGTGTTGTTGGTCAAGATCCAGCAGTAAGAGCAGTAGCAGAGGCAATCCAGCGCTCGCGTGCTGGACTTTCAGATCCTCATCGTCCTATTGCAAGCTTTATGTTCATGGGTCCCACTGGAGTTGGAAAGACGGAGTTAGCTAAGGCCCTTGCTAACTATTTGTTCAATACTGAAGAGGCACTTGTGCGCATCGATATGAGTGAATACATGGAGAAGCATGCAGTTTCAAGATTGATAGGAGCTCCCCCTGGTTATGTCGGGTATGAAGAAGGGGGGCAGTTGACAGAGATTGTTCGCCGAAGACCTTATGCAGTTATATTGTTTGATGAAATTGAGAAGGCCCATTCGGATGTATTTAATGTGTTCCTGCAAATCTTAGATGATGGTAGGGTGACCGACTCGCAAGGACGCACAGTGAGTTTCACCAATACTGTCATCATCATGACATCAAATGTTGGTTCACAATATATCCTAAATACAGATGATAATGATGATGATTCATCGAAGGAAGCGACTTATCAAACAATAAAGCAAAGGGTGATGGATGCTGCACGTGCAGTTTTCCGCCCTGAGTTCATGAACCGGGTTGATGAATATATAGTATTCCAGCCTCTTGATCGTGACCAGATCAGTAGCATTGTGCGATTACAGCTTGAAAGAGTGCAGCAGAGATTAGCTGATCGTAAAATGAAGATTCAAGTGAGTGAAGCTGCTATTCAATTGCTTGGAAGTCTTGGTTATGACCCCAACTATGGAGCACGGCCAGTGAAGCGGGTGATCCAGCAGAATGTTGAGAACGAATTGGCCAAAGGAATATTAAGAGGAGAATTCAAGGATGAGGATACTATTTTAGTAGACACGGAGGTCAGCGCATTTTCGAATGGACAACTTCCTCAGCAGAAGCTAGTGTTTAAAAGACAAGAGTCTGGTTCAGATTCTCCAGCTGAGAACCAAGAAGCTTTCTCTCAGAAACTATGAGACTACACCTCAACATCTTGTTTAGACACATACTATGATTTCGAGCATCGAACTAGTAGTAGCTCTTGTATCTAGATTATGGATATACATATTTCACGGCTTTGAATAGCAAATACCTACACAGTTGAACAGTGTGGAGTTCTGTTTTCGTATAATAAATAGCTTATTAGTCTATAGAAAGTTAACGGTTATTCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g088610.2.1SL2.50ch02:50644536..50651161981-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g088610.2SL2.50ch02:50644342..506514097,068-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g088610.2.1.1SL2.50ch02:50650913..50651409497-n/a
exonexon:Solyc02g088610.2.1.10SL2.50ch02:50644342..50644863522-n/a
exonexon:Solyc02g088610.2.1.2SL2.50ch02:50650010..50650228219-n/a
exonexon:Solyc02g088610.2.1.3SL2.50ch02:50648464..50648701238-2
exonexon:Solyc02g088610.2.1.4SL2.50ch02:50647961..50648156196-1
exonexon:Solyc02g088610.2.1.5SL2.50ch02:50647734..5064778855-n/a
exonexon:Solyc02g088610.2.1.6SL2.50ch02:50647495..50647645151-2
exonexon:Solyc02g088610.2.1.7SL2.50ch02:50646913..50647221309-2
exonexon:Solyc02g088610.2.1.8SL2.50ch02:50646105..50646370266-n/a
exonexon:Solyc02g088610.2.1.9SL2.50ch02:50645005..50645937933-n/a
intronintron:Solyc02g088610.2.1.10SL2.50ch02:50644864..50645004n/a-n/a
intronintron:Solyc02g088610.2.1.2SL2.50ch02:50650229..50650912n/a-n/a
intronintron:Solyc02g088610.2.1.3SL2.50ch02:50648702..50650009n/a-n/a
intronintron:Solyc02g088610.2.1.4SL2.50ch02:50648157..50648463n/a-n/a
intronintron:Solyc02g088610.2.1.5SL2.50ch02:50647789..50647960n/a-n/a
intronintron:Solyc02g088610.2.1.6SL2.50ch02:50647646..50647733n/a-n/a
intronintron:Solyc02g088610.2.1.7SL2.50ch02:50647222..50647494n/a-n/a
intronintron:Solyc02g088610.2.1.8SL2.50ch02:50646371..50646912n/a-n/a
intronintron:Solyc02g088610.2.1.9SL2.50ch02:50645938..50646104n/a-n/a
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Related viewsNone found
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