Solanum lycopersicum mRNA Solyc02g086660.2.1

mRNA details  
Name
Solyc02g086660.2.1
Type
mRNA
Length
2,478
Organism
Solanum lycopersicum
Description
ATP dependent RNA helicase (AHRD V1 *-** B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch02:49307052..49317070
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005515
  • GO:0005524
Length
10019
Nb exon
9
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g086660.2.1 ATP dependent RNA helicase (AHRD V1 *-** B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

GAGGGAGAACGGACGGGAGACATCGTCGGAGGTGGGAATCGTTTGTATCAGCTTCTTTTATCGTCATCGGAAAGACTTTGTCAGAGGTAATTGGATACTGAAGCTTGAGATGGCTGCTACTGCAACTGCATCTTCTACTGGTCCACGTTATGCACCAGAGGATCCCACCCTTCCCAAACCTTGGAAAGGCCTAGTTGATGGTAAGACTGGATATCTCTATTTTTGGAATCCAGAGACCAATACTACCCAATACGAGAAGCCTGTTGCTACTCCTCATGTGGGTGCTGCACAACATAAATCCTCTGTATCTGTAAGTTCATCAGTTGAGAGGCCTTCTCAAAGTCAATGTTCTGACCATGGTGACAACAGAGGTACCAATGGTGCCTTGAGCAAACTTTCCTCTGGAGAGGGTATTCAGACTGCAAGAGCAAATGAGCTTTCCCGCGATGAAACATCTGCGCCTAAAGGTTATAGTGCTTCAGCTGCCGCGAGTGACATATCTCCAGATGCCTATCGCCGTCAGCATGAAATTTCTGTCTCAGGAGGTGATGTGCCCCCACCTTTCACATCGTTTGAAGCTACTGGGTTTCCTTCAGAGATTTTGAGGGAGATACATCAAGCTGGGTTTCCTGCTCCTTCCCCAATACAGGCACAGTCCTGGCCCATTGCACTTCAGGGCCGTGACATAGTAGCTGTTGCAAAGACTGGGTCTGGAAAAACTCTAGGTTTCTTGCTTCCTGGCTTTATTCTTCTAAAGCAACGTCGGAGTAATCCTCAATCAGGCCCTACTATTTTGGTTCTCTCGCCAACAAGAGAATTAGCCACACAGATACAAGATGAAGCTGTGAAGTTTGGTAGATCTTCAAAGATTTCTTGCACGTGTTTATATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTGGATAGGGGAGTTGATATTGTTGTTGCTACCCCTGGTCGATTGAATGATATTTTGGAGATGAGAAGAGTTAGGCTGGATCAAGTTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTGGACATGGGATTCGAACCTCAGATAAGGAAGATTGTGAAGGAGGTGCCTACGCGACGGCAGACACTGATGTACACAGCAACATGGCCTAAGGAGGTCCGTAGAATTGCAGCTGATCTATTGGTTAATCCAGTTCAGGTTAACATTGGGAATGTTGATGAGCTTGTTGCGAACAAGTCTATTACACAGTACATTGAAGTCTTGTCATATATGGATAAACAAAAGCGTCTAGACCAGATCTTGAGATCCCAAGAGCCTGGATCAAAAATCATTATCTTCTGTTCAACTAAGAAAATGTGTGACCAACTTGCTCGCAATCTTACACACCCATTTGGAGCTGCTGCTATTCATGGTGATAAATCTCAGGGTGAGAGGGATCATGTACTGAGCCAGTTCCGCACTGGCAAGTCCCCCGTTCTTGTTGCAACTGATGTTGCTGCTCGGGGCTTGGATGTCAAAGATATCAGGGTGGTGGTCAACTATGATTTTCCAACTGGTATAGAGGACTATGTCCACAGAATAGGAAGAACTGGTCGGGCTGGTGCGACTGGTGAGGCCTACACATTTTTTGTTGACCAGGATGCTAAACATGCTTCAGATCTTATTAAAGTTTTAGAAGGAGCAAATCAGCAAGTGCCTACTGAACTACGTGATATGGCTTCTCGAGGAGGTGGTATGGGGAGGGCTAGGCGTCAATGGGATTCTGGCTCAGGTGGACGGGAAGGAGGACATGGGGGACGTTATGATGCTGGCTACGGTGGACGAGATGGAGCAAGGGGTGGTTGGGAAGCCCCTTCATCAGAAAGAAGTGGACGTGTTTATGACTCGGATTCACGTGACAGAGATAGACATGGTCATGGCTCTGATGCTCCAGCTAGTTTCCATGGTCGAAGCTTCCATGAAACTATGATGCAGGGTTCACAGAGACGTGATAGAAGTAGGAGCAGAAGCCCTAATAGAGGTTCTGGATGGGGTGACAGAAAAGGCAGGGAGCGAAGTCGTAGCCGTAGTGCTGAAAGATCTGAGCGGACTCGTATTCAAGTTCCAGTAGGTGGCAGTTTCCATGAAGCCATGATGGGCTTCACTAGATCATCAGCTGGTGATTCCCGAAAGGACTGGGAAAAAGAAAGATCCCAAGGTGATGGGAAATCTGGCGATGGACCCCGTGCTAACAATTGGGAGGAGTAAGAAGGTAAAGGAGAGCCTGTGTTGATTTTTGATGTGTTGTAGGAAATGCTGGAAGAAAAAGGGGTCATTTTTGTTAAACTTTAACCACTACATGTTTTGGCAAACAGTGTTCTCGGATAGAAGAAGCTTTTAGCGTATTACTGGAAATAGATAGCTGAAAATCTGCAAATGGGAAGTTTTTGACGGATGTAAATGTAAAGTATTTTACCGTCAAACTTTGTTTAATGGAATCAGCCCACTTCTAAGTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g086660.2.1SL2.50ch02:49307299..49313423707-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g086660.2SL2.50ch02:49307052..4931707010,019-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g086660.2.1.1SL2.50ch02:49316987..4931707084-n/a
exonexon:Solyc02g086660.2.1.2SL2.50ch02:49313115..49313448334-n/a
exonexon:Solyc02g086660.2.1.3SL2.50ch02:49312018..49312140123-n/a
exonexon:Solyc02g086660.2.1.4SL2.50ch02:49311263..4931133169-n/a
exonexon:Solyc02g086660.2.1.5SL2.50ch02:49310480..49310749270-n/a
exonexon:Solyc02g086660.2.1.6SL2.50ch02:49309458..49309808351-n/a
exonexon:Solyc02g086660.2.1.7SL2.50ch02:49308984..49309261278-1
exonexon:Solyc02g086660.2.1.8SL2.50ch02:49307729..49308103375-1
exonexon:Solyc02g086660.2.1.9SL2.50ch02:49307052..49307645594-n/a
intronintron:Solyc02g086660.2.1.2SL2.50ch02:49313449..49316986n/a-n/a
intronintron:Solyc02g086660.2.1.3SL2.50ch02:49312141..49313114n/a-n/a
intronintron:Solyc02g086660.2.1.4SL2.50ch02:49311332..49312017n/a-n/a
intronintron:Solyc02g086660.2.1.5SL2.50ch02:49310750..49311262n/a-n/a
intronintron:Solyc02g086660.2.1.6SL2.50ch02:49309809..49310479n/a-n/a
intronintron:Solyc02g086660.2.1.7SL2.50ch02:49309262..49309457n/a-n/a
intronintron:Solyc02g086660.2.1.8SL2.50ch02:49308104..49308983n/a-n/a
intronintron:Solyc02g086660.2.1.9SL2.50ch02:49307646..49307728n/a-n/a
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