Solanum lycopersicum mRNA Solyc02g086600.2.1

mRNA details  
Name
Solyc02g086600.2.1
Type
mRNA
Length
3,198
Organism
Solanum lycopersicum
Description
Polyribonucleotide nucleotidyltransferase (AHRD V1 ***- Q1PVN2_9BACT); contains Interpro domain(s) IPR012162 Polyribonucleotide nucleotidyltransferase
Location(s)
SL2.50ch02:49256936..49265351
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006396
  • GO:0003723
  • GO:0005739
Length
8416
Nb exon
16
Sifter term
GO:0003729
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g086600.2.1 Polyribonucleotide nucleotidyltransferase (AHRD V1 ***- Q1PVN2_9BACT); contains Interpro domain(s) IPR012162 Polyribonucleotide nucleotidyltransferase

CAACTCTCTAATGGCTTCTGTAAGAAACAAAATAAACCCACTTCTCTGCAACTTACCGTACGTTCTCACATGGCGAAGATTTGGTTTTCGTACAATCTGCAGTGGTCGTCTTGGCTTTGCGCCGTCCACATCACCGTCAGTGGCCAATACAGATACTCCTGTTGCTCGAACGAAGGTTCTCGAGACATTCACTGAGGAATTTGAGATTGGATCACGCAAAATTACTTTAGAAACTGGAAAGATTGCGAGGTTTGCTAATGGCTCTGTAATTTTAGCCATGGAAGAGACGAAAGTCCTCTCTACTGTCGCTTCATCTAAAGGCGATGCAATTAGTGATTTTTTGCCTCTTACAGTTGATTACCAAGAAAAACAATTTGCTCAAAGTGTTATTCCGACTACATACATGAGAAGAGAGGGTGCTCCAAAAGAACGTGAACTTTTATGTGGTCGTCTTATTGATCGACCCATAAGACCACTTTTTCCTCCTGGATTTTACCACGAGGTGCAGGTAATGGCAAGTGTGCTTTCATCTGACGGGAAACAAGATCCAGATATATTGGCAGCTAATGCATCATCTGCTGCTCTAATGTTGTCAGATATTCCTTGGGGTGGGCCAATTGGAGTAATACGTATTGGAAGGATTTCAGGTCAATTTGTTGTAAATCCAAGCATGGAGGAGCTTAGCATCAGTGATCTTAACTTGGTATATGCATGTACGAGGGATAAAACTTTGATGATAGATGTCCAAGCTCGTGAAATATCTGAAAAGGATTTGGAAGCTGCTTTGAGACTTGCTCATCCAGAGGCTGTTAAGTATCTTGACCCTCAAATTAGACTCGCAGCTAAAGCTGGTAAGCAGAAGAAAGAGTATAAGCTGTCTATGGTATCAGAAAAAACATTTGAAAAGATTCAGAATCTGGCCAAAGAACCTATAGAAGCTGTTTTTACAGACCCTACTTATGGAAAGTTCGAGCGTGGAGAAGCTTTGGAAAAAATCACACAGGACGTTAAAAGAGCTCTTGAGGAAGAAGGTGATGAGGAAGGCCTAAAAATTCTACCAAAGACAGTTGATACAGTAAGGAAACAGGTTGTTCGCAGAAGGATCATTTCTGAAGGGCTTAGAGTGGACGGAAGGTGTCTTGATGAAGTTAGGCCTTTGTACTGTGAAGCTGGTAATTTACCTGTATTACATGGATCTGCAATTTTTTCAAGAGGGGATACTCAGGTCCTTTGCACTGTTACCCTTGGAGCACCTGGGGATGCTCAACGTCTGGATTCCCTGGTCGGTCCTTCAAGCAAGCGTTTCATGCTGCATTATAGCTTTCCACCGTTTTGTACAAATGAAGTTGGCAAACGAACTGGCCTGAATAGGCGTGAAGTTGGTCATGGCACTCTTGCTGAAAAGGCTCTGCTTGCTGTATTACCCCCGGAAGATGATTTTCCATACACAGTCCGAATCAATTCTGAAGTCATGGCATCTGATGGCTCGACATCAATGGCAACTGTCTGTGGAGGCAGCATGGCTTTGATGGATTCTGGCATTCCTGTAAGAGAACATGTAGCAGGTCTGTCGATAGGGCTTGTTAGTGAAGTTGACCCATCAACTGGTGAAATCAAGGATTATCGTTTATTGACTGATATTCTGGGTCTGGAGGATCATCTGGGTGACATGGATTTTAAGATTGCTGGTACCCGTAATGGTGTAACGGCCATACAATTAGATATTAAACCTGCTGGAATTCCTTTGGATATCATATGTGAGAGTCTAGATCCTGCACTTAAAGGGAGGCTTCAAATCCTCGAGCACATGGAGCGTGAGATAAGTGCTCCACGTATTCAGGATAACATATATTCTCCTCGGCTAGTTACGTCAAAATACAGCAATGATGCACTTCGTCGCTTGATTGGTCCTGTTGGTGCTTTGAAGAGGAAAATTGAAGATGAAACAGGTGCACGGATCTCGGTTAGTGATGGAACACTTACTATAATTGCCAAAAATCAGTCGGTGATGGAGAAAGTACAGGAGAAGGTTGATTTTATAATTGGACGTGAAATTGAGATTGGAGGAGTATATAAAGGTATTGTTGTATCTGTTAAAGAATATGGCGCCTTTGTGGAGTTTAATGGTGGACAACAGGGCCTCTTACATATTTCAGAATTATCACACGACCCGGTTTCCAGAGTTTCAGATGTGGTATCTGTGGGACAGCAACTTTCTTTAATGTGTATAGGACAGGACGTTCGTGGTAATATTAATTTATCATTAAAAGCCACCCTGCCTAGACCTAAATCTAAGACAGACATTTGTGTTGATGAACCTGTTGCTCCTACTAGTCAAGAGGTTAATGTTTGGGCTGCTATTGAGGATAAATCCAATGAGCAAGAAAACCAAGGTGCTTCTATGGGACCTGTAACTAATGATTCAACTTTGAATTCAGCTACACCAGCAGTTCTAATCCGTAGTGCGGCGGAGTGTGATGAGGAGGAAAAAAGTGATGCTCTGAATTCGAAAAGTGATAATGGATCTCAAAGTGCTTCTAAATCTGAGAAGAAGACAAGGATACCGTCCTCACTTTCAGAATCCGGTTTTTCTTCTAGAAGTGCGAAGAAGTCCAAAAGAAGCAAGGATGCCATTCTTGACCTAATAAGTGATGATGAAAGTGAGCAGAAACATACTCCTGAAGTAGGCCTACATTCTCAAATTGGGTCAGATAAGGATGACGCTACGTCTGAGACCCCTATGAGTGCAAACAAACTAAAGCTTGGTATGAAAGTAACAGCAAAAGTGCATCAAATTCGTGCCCTTGGTTTGGTGCTTGATTTGGGTGGTGGAATTCGTGGAATGTATCGTTTTGAGTCTGGTATGAAGAAGGACTTTGAGGTGGGTGATGAGCTGCGGGTGAAGTGCTCAAGTTTTTCAACTAAAGGGATTCCAGTATTGTCTTTGGTGAAAGAAGAGTAATTTAAGGCACTATTATACCAAAGTAAAGCATAAAACTGCAGGCTGTAAAAAAATGTCAACTAAGAAATTGACAGGGAATCACAAAACACCGAGATGCTTGAATTTTGTTTCCAAGAGCCTGCATTTCTCAGAGCACACGCAGATCGTTGCTATGAGTTGGATCGTGAGAATAAAGAAAGCAGAAGGCCTCCTAAAATCAGGTAGCCTCCCGGAACAGGGCCTCTGGTCGGTTTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g086600.2.1SL2.50ch02:49257171..49265341984-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g086600.2SL2.50ch02:49256936..492653518,416-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g086600.2.1.1SL2.50ch02:49265000..49265351352-n/a
exonexon:Solyc02g086600.2.1.10SL2.50ch02:49261205..49261335131-n/a
exonexon:Solyc02g086600.2.1.11SL2.50ch02:49260113..49260332220-2
exonexon:Solyc02g086600.2.1.12SL2.50ch02:49259937..4926002084-2
exonexon:Solyc02g086600.2.1.13SL2.50ch02:49259316..4925939580-n/a
exonexon:Solyc02g086600.2.1.14SL2.50ch02:49258848..49258991144-n/a
exonexon:Solyc02g086600.2.1.15SL2.50ch02:49257624..49258307684-n/a
exonexon:Solyc02g086600.2.1.16SL2.50ch02:49256936..49257276341-n/a
exonexon:Solyc02g086600.2.1.2SL2.50ch02:49264345..49264500156-n/a
exonexon:Solyc02g086600.2.1.3SL2.50ch02:49264087..49264257171-n/a
exonexon:Solyc02g086600.2.1.4SL2.50ch02:49263528..49263653126-n/a
exonexon:Solyc02g086600.2.1.5SL2.50ch02:49263286..49263447162-n/a
exonexon:Solyc02g086600.2.1.6SL2.50ch02:49263031..49263150120-n/a
exonexon:Solyc02g086600.2.1.7SL2.50ch02:49262491..49262628138-n/a
exonexon:Solyc02g086600.2.1.8SL2.50ch02:49262212..49262374163-2
exonexon:Solyc02g086600.2.1.9SL2.50ch02:49261543..49261668126-2
intronintron:Solyc02g086600.2.1.10SL2.50ch02:49261336..49261542n/a-n/a
intronintron:Solyc02g086600.2.1.11SL2.50ch02:49260333..49261204n/a-n/a
intronintron:Solyc02g086600.2.1.12SL2.50ch02:49260021..49260112n/a-n/a
intronintron:Solyc02g086600.2.1.13SL2.50ch02:49259396..49259936n/a-n/a
intronintron:Solyc02g086600.2.1.14SL2.50ch02:49258992..49259315n/a-n/a
intronintron:Solyc02g086600.2.1.15SL2.50ch02:49258308..49258847n/a-n/a
intronintron:Solyc02g086600.2.1.16SL2.50ch02:49257277..49257623n/a-n/a
intronintron:Solyc02g086600.2.1.2SL2.50ch02:49264501..49264999n/a-n/a
intronintron:Solyc02g086600.2.1.3SL2.50ch02:49264258..49264344n/a-n/a
intronintron:Solyc02g086600.2.1.4SL2.50ch02:49263654..49264086n/a-n/a
intronintron:Solyc02g086600.2.1.5SL2.50ch02:49263448..49263527n/a-n/a
intronintron:Solyc02g086600.2.1.6SL2.50ch02:49263151..49263285n/a-n/a
intronintron:Solyc02g086600.2.1.7SL2.50ch02:49262629..49263030n/a-n/a
intronintron:Solyc02g086600.2.1.8SL2.50ch02:49262375..49262490n/a-n/a
intronintron:Solyc02g086600.2.1.9SL2.50ch02:49261669..49262211n/a-n/a
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Related viewsNone found
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