Solanum lycopersicum mRNA Solyc02g085870.2.1

mRNA details  
Name
Solyc02g085870.2.1
Type
mRNA
Length
2,115
Organism
Solanum lycopersicum
Description
Fatty acid elongase 3-ketoacyl-CoA synthase (AHRD V1 **** Q6DUV5_BRANA); contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthase
Location(s)
SL2.50ch02:48651127..48653367
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008610
  • GO:0016020
  • GO:0008152
Length
2241
Nb exon
2
Sifter term
GO:0009922
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g085870.2.1 Fatty acid elongase 3-ketoacyl-CoA synthase (AHRD V1 **** Q6DUV5_BRANA); contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthase

CATTCATTTAATTTCTTTGCTCCTCACATTGTACTCTTTAAATTCTCACCAATCTTCCCTTTCTATTGTCTTAGCTACAATCAAACAATTTCCCTCCTTCTTTTCTAAAAGAAAAAATTGAAATTGAGAGAATTTTTTTGTTTGTTTGTTTGTGAAAATGCCAGAACCAGTCCCAAATTTCTCTAACTCTGTTAAGCTGAAATATGTGAAACTTGGTTACCAATACCTTGTTAATAATTTTCTTACTTTCTTGATTGTTCCCATAATGGCTGCTCTTATTATTCAGGTACTAAAATTAGGGCCTGAAGAGATTGTAAGTATTTGGAATTCACTTCACTTTGATCTCCTCCAAATCCTCTGTTCTTCTTTTCTCATCATTTTCATAGCCACAGTTTACTTCATGTCAAAACCAAGATCCATTTACTTAGTAGATTACTCATGTTACAAAGCCCCCGTTACGTGCAGAGTACCCTTTTCAACTTTCATGGAACATTCGCGTCTAATCTTGAAAGATAATCCAAAAAGTGTTGAATTTCAAATGCGAATTCTTGAAAGGTCAGGTCTTGGTGAAGAAACATGTTTGCCACCAGCAATTCATTATATCCCTCCAACGCCAACAATGGAGACTGCTAGAAATGAAGCTGAAGTTGTTATATTCTCTGCTATTGATGACTTGATGAAGAAAACAGGACTTAAGCCTAAAGATATCGATATTCTTGTCGTGAACTGTAGCTTGTTTTCTCCAACTCCGTCTTTATCTGCTATGGTTGTCAATAAGTACAAGTTGAGAAGTAACATAAAAAGTTACAATCTTTCTGGCATGGGATGTAGTGCTGGTCTAATCTCCATTGATTTGGCTAGAGATCTTCTTCAAGTTTTACCAAATTCATGTGCTTTAGTTGTGAGTACTGAAATCATCACTCCTAATTATTATCAAGGCTCAGAAAGAGCAATGTTACTTCCAAATTGTTTGTTCAGAATGGGTGGTGCTGCTATACTTTTGTCTAACAAGAGAAAAGATAGTGCAAGAGCTAAATACAGATTAATGCATGTGGTGAGAACCCACAAAGGTGCTGATGATAAGGCATTTAAATGTGTTTTTCAACAAGAAGATCCACAAGGGAAAGTTGGTATTAATCTATCAAAAGATCTTATGGTTAtagcaggggAAGCTTTGAAATCAAACATCACTACGATCGGTCCGTTGGTTCTTCCAGCTTCAGAGCAGCTTCTCTTCTTGTTCACTCTTATTGGAAGGAAGATTTTTAATCCCAAATGGAAAGCTTATATTCCTGATTTCAAACAAGCCTTCGAACATTTCTGCATCCATGCTGGTGGAAGAGCTGTTATTGATGAACTTCAGAAGAATCTTCAGTTATCTGCTGAACATGTTGAGGCTTCAAGAATGACTCTGCACAAATTTGGTAACACATCATCGTCTTCATTATGGTATGAGATGAGTTACATCGAGGCGAAAGGAAGGATGAAAAAAGGTGATAGAATTTGGCAAATAGCATTTGGAAGTGGATTCAAGTGTAACAGTGCAGTTTGGAAGTGTAACCGCACAATCAAGACACCAACGGATGGACCATGGGATGATTGCATTGATAGGTACCCAGTGTTCATCCCAGAGATTGTCAAGCTCTAACAATTTTACACCTTACAAACTTATATATTCAAAAAAACAATAATAAAACAAGATATTAGGGGTGTTGTTAAATTGAGCAAGTACGAGACTTTGTTAATTAAACTTCATTAGAAATTAAACGTGTGTGAGCTCTCAGACGCATGGATAATTCAACGTGATCATCGATTTTCTTTCTTCTTTGTGGACGGCTGGAAAATGGTAGTTGGTTAAATGTCTGCAACATATATTCCATTTGCATTTTTAGTTGTTAGGGTATTATTTATTACTGTACGTCCAATGGAAAAACTGTACAATTATTTATTTTTCTCAGCTACTACAAATTTATATCATGTACTCTACCCCTCTTTCTTTAGATCAACAGTTATAAAATTCATGAATCATATACACGGAAATAGAAAGATAACTGTTTAATGATCATTGAAAGTTGTGCCCTTCTGCATTATGGAAATTAGTATTTTATACGACTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g085870.2.1SL2.50ch02:48651283..48652900497+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g085870.2SL2.50ch02:48651127..486533672,241+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g085870.2.1.1SL2.50ch02:48651127..486525501,424+n/a
exonexon:Solyc02g085870.2.1.2SL2.50ch02:48652677..48653367691+n/a
intronintron:Solyc02g085870.2.1.1SL2.50ch02:48652551..48652676n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17737777%2Fdetails feature 17737777
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