Solanum lycopersicum mRNA Solyc02g083390.2.1

mRNA details  
Name
Solyc02g083390.2.1
Type
mRNA
Length
1,117
Organism
Solanum lycopersicum
Description
Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q9FKX6_ARATH); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunit
Location(s)
SL2.50ch02:46812209..46815878
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016491
  • GO:0055114
Length
3670
Nb exon
8
Sifter term
GO:0004656
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g083390.2.1 Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q9FKX6_ARATH); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunit

ATAAACAAAATCTGTGTTTGATTAGTCAAAATTTTAAAACCCACTGTTTCCATTTCTTTGCCGAGTTGCATTAGCTGATCAAAGTTGTAGATTAGATCTTCAAATATTCAAAGATTTTGCAGATTTCATCGTGGAGTTTGAGTAGCAATGGCAGTGAAAGGAAGGCATTCTCGATTGGGGCCTCGAAAATCGTCGAATTCTACACTAATCTTTGGTGGGATTATTGTGTTGTCATTTTTCGCTCTCATTCTTCTTGCTTTCCGAATTATCTCCTTTCACAGGGGCTCTCAGAAAGCACACGATCTCACCTCTATAGCCCACAATACAGTTCAAAGACAAGATGATGACGACGATGGAAAAACTGATCAGTGGGTTGAAGTGATTTCTTCGGAACCAAGAGCCTACGTGTACCATAACTTCTTGTCCAAGGAGGAATGTGAGTATCTGATTAGTCTTGCCAAGCCTCACATGCAAAAGTCAAGTGTCGTAGATAGTTCTACTGGCAAGAGTATGGACAGCAGAGTCCGAACCAGTTCCGGAACATTTCTTGCAAGAGGGCGTGATAAGGTGATCAGGGATATTGAGAAAAGGATTGCAGATTTCACCTTCATACCAGTAGAGCATGGTGAAGGTCTTCAAATTCTCCACTACGAAGTGGGGCAAAAGTATGAGCCCCACTACGATTACTTTCTTGATGAGTTTAACACTAAAAATGGGGGTCAACGCATTGCGACGGTTTTAATGTACTTGTCAGATGTTGATGAAGGGGGCGAAACAGTATTCCCAGCTGCAAAGGGAAATTATAGTGCAGTCCCTTGGTGGAATGAACTATCTGTATGTGGAAAAGGTGGACTCTCTGTAAAACCAAAGATGGGTGACGCATTGCTTTTCTGGAGCATGAAGCCTGATGCAGTTCTAGATCCATCAAGTTTGTGGGTGCCCTGTAATTAAAGGTAACAAATGGTCATCTACAAAATGGATGCGCGTCCATGAATACAAGGCTTAACCTACTGCTAGAGGTCAGTTTTGAGTTTGGATGCAGTCACTGTTGTGCCATTTGTATCAAAAGGGGGATAGTCTTGAATAGAGCCACCACACATGAAGCTTCAATTTTACT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g083390.2.1SL2.50ch02:46812355..46815180268+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g083390.2SL2.50ch02:46812209..468158783,670+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g083390.2.1.1SL2.50ch02:46812209..46812543335+n/a
exonexon:Solyc02g083390.2.1.2SL2.50ch02:46812635..4681272288+n/a
exonexon:Solyc02g083390.2.1.3SL2.50ch02:46813149..4681324698+1
exonexon:Solyc02g083390.2.1.4SL2.50ch02:46813374..4681347198+n/a
exonexon:Solyc02g083390.2.1.5SL2.50ch02:46814583..46814712130+1
exonexon:Solyc02g083390.2.1.6SL2.50ch02:46814794..46814976183+2
exonexon:Solyc02g083390.2.1.7SL2.50ch02:46815162..4681524887+1
exonexon:Solyc02g083390.2.1.8SL2.50ch02:46815781..4681587898+1
intronintron:Solyc02g083390.2.1.1SL2.50ch02:46812544..46812634n/a+n/a
intronintron:Solyc02g083390.2.1.2SL2.50ch02:46812723..46813148n/a+n/a
intronintron:Solyc02g083390.2.1.3SL2.50ch02:46813247..46813373n/a+n/a
intronintron:Solyc02g083390.2.1.4SL2.50ch02:46813472..46814582n/a+n/a
intronintron:Solyc02g083390.2.1.5SL2.50ch02:46814713..46814793n/a+n/a
intronintron:Solyc02g083390.2.1.6SL2.50ch02:46814977..46815161n/a+n/a
intronintron:Solyc02g083390.2.1.7SL2.50ch02:46815249..46815780n/a+n/a
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Related viewsNone found
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