Sol Genomics Network

Solanum lycopersicum gene Solyc02g082120.2

Name Solyc02g082120.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc02g082120	Length 2,421

Description

DNA-3-methyladenine glycosylase I (AHRD V1 ***- B6TPB7_MAIZE); contains Interpro domain(s) IPR005019 Methyladenine glycosylase

Location(s)

SL2.50ch02:45841825..45844245

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2421

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc02g082120.2.1	SL2.50ch02:45841825..45844245	1,691	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc02g082120.2 SL2.50ch02:45841825..45844245
CATTTCTTAATCCTTTAGCTTTGATCATCACCTACTCAACACAAAAGAAGAAAAAAAAGCCCTCTCTCTCAAAAACAATTAAAGATGTGTAATTCCAAAACTAAACTGCAGAGCAGCGCACAAACTCTCTCACAAATTAATGGCCGCCCTGTTCTTCAACCACATAGCAATATAGTTCCTCTTTACGAACGCCGCAACTCGCTTAAAAAGACAACACACACTGCTGCACCTGTTACTGCAAATGGAAGTACTAAAGTCAAGATGAGTTCATCAACAACTCCACCGGTCTCACCTAAAATGAAGTCGCCAAGACTACCAGCTATTAAGAGAGGGAATAACATTGATCCTAATGGCTTGAGTTCAAGTGCTGAGAAAATTGTGACACCCAAAGGGACTGCTAATAAAGCCCCAATTCTGTTAAAGAAGCCCAAGAAAAGCAGCGGGGGCTTAGCCTCACCCTCTTCTGTGGAGAATTCTTCATTGAAATATTCTTCTTCCTTGATAGTCGAGGCTCCGGGAAGTATAGCAGCAGCAAGAAGGGAACAAGTAGCAATTGCACAAGTGCAGAGGAAAATGAAAATTGCGCATTATGGAAGAACAAAATCAGCCAAGTATGAAGGAAAAGTATCTTCTCTTGACCCTTCCTTCGCCTCAGCAGTTATCCCTAATCCTAGAGAGGACAAAAGATGCAGCTTTATCACACCTAATTCAGGTAAAAAGCACCTCAATTCTACACTTAAAGAGCAATTAAGTACTATGTTCTAACACAAAGACACACAAATTACGGGTTTTCAATAAATAGGACTAAAGTTCTTGGTGTTTTCTTGTGTTTTCAGACCCACTCTATATTGCATACCATGATGAAGAATGGGGAGTTCCAGTACATGATGATAAGTAAGAATCGTTTTTTCCCCTGTTTTTCTGCTTTCTGCACATTTATCAGGTTCGTTCTTGGACTAATTTCCTTATTTTACCTACTCAGTCTGCTTTTTGAATTGCTGGTATTAACTGGTGCACAAGTTGGATCAGACTGGACTTCAGTTTTAAAGAAAAGGCAAGAATTCAGGTAGGTTTTGCTATTTTTTTAACTGATTCTTGATTAACATTTTAAAAAAAAAAAAAAAAAACAGAGGCCCTAACCTGTATTATGCATTCTACTTTCCTCCAGGGATGCCTTTTCAGGATTTGATCCAGAAATTGTCTCGAAGTACAATGAAAAGAAGATAACTTCAACAAGTGTCGAATATGGTATAGAGCTTAGCCAAATCCGAGGAGCTGTCGACAACTCTACCAGAATTTTAGAGGTAATAATAATATAATATGAACTCTGTAAAGGATTTTAAGAACTGATTTAACTTTTCAATTGTCCTTTCTTTTTCAATGCCTTTCAATAATTCCCAACATTTCTGTTAAGAATGACATTATGATACCCTAATTGGAAACATAGATGGTAAAGCAAGTTTTGAATTAATTAATCTTCTAATCATGCATGGACCTAACAACTGTTAAGTAACACAATCACATGGGCCATATGGAATAAGTATTGCATAACTGTCCTTGACAAGTACAACCATAAAGTAAGATTAGTCTTATTAAATAAATGTTTAAGCTTAAGAAATAGTAAACATATATATATTGTTACATTCCTATGATTCTTAAATAAAAATTTGGAAAGTGGGGATCATCCAAGTGTATGATTATATTCTTGAATATATTACAGATTAAGAAGACATTTGGTTCGTTCGACAAGTATCTGTGGGGATTCGTGAACAACAAGCCCATTGCAACACAATACAAGGCATGCAACAAAATCCCAGTGAAGACTTCAAAATCAGAAACCATAAGTAAAGACATGGTCAAAAGAGGGTTCCGCTATGTCGGCCCCACCGTTATACACTCGTTCATGCAGGCAGCCGGACTCACCAACGACCACCTGATCGCCTGTCCACGACATCTCCCGTGTGTGGCATTGGCAACTCAACCTGCACCCCCTGCCCTATAATTTACCTTTTATCAACTACTCTACTAAGCCATAGTTTTAAGTTTAGCAAACAAAAGTTGTTGAGGAAACCTAGTTGAGATTGTCTAACAATATTCTACCTTCTTCTTTTTTTTGGGGTGATGAATTTAGATGTTTTAAGTGATTTTATTTGATGATGTAAGATATTGAGTTGGTTAAATGTATAGAAAGTAGAAAGGAATAAAGTAAGGATGGTATAGATATGGGGGGACAGGAAGCATGTGCAGGGTGGGCAGGGGAATGCCAATTGCATGTGCCATTTGATTTAATTTTGTGTGGGCACTGACCACCACCACCATCAGCAGCAAAAGCCATCACTGCACCACTATTTACTTGCACTTGCGTGCTTTTGAACAGTGACTTATCTTTCAAGGATAAGATCATCAAGTACACAGAGGAGG

Download sequence region

Download sequence (2.4Kb)

Get flanking sequences on SL2.50ch02

mRNA Solyc02g082120.2.1

Ontology terms

terms associated with this mRNA

GO:0006284 – base-excision repair
GO:0006281 – DNA repair

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc02g082120.2.1	SL2.50ch02:45841908..45843826	396	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc02g082120.2	SL2.50ch02:45841825..45844245	2,421	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc02g082120.2.1.1	SL2.50ch02:45841825..45842536	712	+	n/a
exon	exon:Solyc02g082120.2.1.2	SL2.50ch02:45842661..45842718	58	+	n/a
exon	exon:Solyc02g082120.2.1.3	SL2.50ch02:45842807..45842890	84	+	2
exon	exon:Solyc02g082120.2.1.4	SL2.50ch02:45842993..45843128	136	+	1
exon	exon:Solyc02g082120.2.1.5	SL2.50ch02:45843545..45844245	701	+	1
intron	intron:Solyc02g082120.2.1.1	SL2.50ch02:45842537..45842660	n/a	+	n/a
intron	intron:Solyc02g082120.2.1.2	SL2.50ch02:45842719..45842806	n/a	+	n/a
intron	intron:Solyc02g082120.2.1.3	SL2.50ch02:45842891..45842992	n/a	+	n/a
intron	intron:Solyc02g082120.2.1.4	SL2.50ch02:45843129..45843544	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc02g082120

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17733125%2Fdetails feature 17733125

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Accessions	Seedlots
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