Solanum lycopersicum mRNA Solyc02g068920.2.1

mRNA details  
Name
Solyc02g068920.2.1
Type
mRNA
Length
2,120
Organism
Solanum lycopersicum
Description
Lecithin cholesterol acyltransferase (AHRD V1 ***- A2Q294_MEDTR); contains Interpro domain(s) IPR003386 Lecithin:cholesterol acyltransferase
Location(s)
SL2.50ch02:38802826..38811424
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006629
Length
8599
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g068920.2.1 Lecithin cholesterol acyltransferase (AHRD V1 ***- A2Q294_MEDTR); contains Interpro domain(s) IPR003386 Lecithin:cholesterol acyltransferase

CGCTAAACATATTTTCTGAACCATTGGATTTTTTAATATCGTAAATACTCTTTCTGATGATTTTATCTATTTTGAGGGTAAAATGGTCATTCGACATGAAACGTACGATAAAAATGTGATAGAGGACAAATTCTCTTCACTTTCCGTCAACTCCACGGCTCTTCTCCGCCATCGATCGCCGCCTTCCTCCGCCTTATCCAGAAAAAACCCCTAAAATTCACTCTATTTCTCATTCAATTTCATTGAATTGAACTCTAAATTTACCCTTTGCTTGAATTTCTTCTCCAATTTCTGTAATCTGCAATTTGACGTTAGGGGAATGGCGATGTTAATAGAGGAGCTGATTAAGTCAATAGAGATGTGGCTGAAGCTGATCAAGAAGCCTCAGGAGTACATTGACCCGACACTTGATCCAGTTCTATTAGTTCCGGGTGTTGCCGGGTCGATTCTCAACGCTGTTGATAAGAAAACAGGTCGGACCGAACGGGTTTGGGTCCGAATACTTGGTGCCGATCATGAGTTTTGTGATAAGTTATGGTGTCGTTTTGACCCTTCTACCGGTAAAACTACCAATTTAGACCCTGACACAAGCATTGAGGTCCCGGAGGACAGATATGGACTGTATGCTATTGATAATTTGGATCCTGACATGATTATTGGGTCTGATTGTGTATATTATTACCATGATATGATAGTTGAGATGCTCAGCTGGGGTTACCAAGAAGGAAAAACACTATTTGGATTTGGCTATGATTTCCGGCAGAGCAACAGGCTTCAGGAAACAATGGAGTGTTTTGCGCAAAAGCTAGAATCCATACATACTGCGTCAGGAGGCAAGAAGATAAACATTATAAGTCATTCTATGGGTGGTCTTCTGGTTAAATGTTTCATGGCTCTCCACAGTGATATTTTTGAAAAATATGTGAAGAATTGGATTGCAATAGCTGCACCATTCCAAGGTGCTCCTGGATATATTACCTCTTCATTATTGAACGGAACATCATTTGTGCATGGATGGGAAGAGAGGTTTTTCATATCCAAATGGAGTATGCATCAACTGTTGATCGAGTGTCCGTCAATATATGAATTAATGGGGTGTCCTGATTTCCACTGGGAGCATGCACCAGTTCTAGAAATTTGGAAGGAAAAATCTAACAGTAATGGAGAGTCCTCCGTTGTACTCGAGTCTTACTCTCCACTGGAAGCTGTATCAGTGTATGAGTTAGCTCTTGCAAACAACAAGGTTACTTATAATGGAGAAAAAATTTCTCTGCCGTTCAATCTGGAACTCTTGAAATGGGCTAATAAGACCCGAGAGATATTGTGCCATGCAAAGGTTCCTGATAAAGTTAAGTTCTACAACATCTATGGGACCAATTATGAGACGCCTCATAGTGTCTGTTATGGAAGTCAGAATGCACCCATTTCTGATCTTCAACAATTACCATTTGTCCAGTCTAACTACATATCGGTTGATGGAGATGGTACAGTTCCAACAGAATCTGCAAAGGCTGATGGGCTTAAAGCAGAAGCTAGGGTTGGAGTCCCTGGGGATCACAGAGGAATCGTCTGTGACCGCCACGTGTTTAGAGTGATCAAGCACTGGTTGCGAGCAGATCATGATCCTTATTACAATCCAATCAACGATTACGTTATCCTACCCACTTCATTTGACATCGAAAGGCACCATGAGAAAGGTTTGGATGTAACTTCTCTCAGAGAGGAGTGGGAAATTGTTTCAGAAAGCCAGGATGGCAAAGAGAATGCGGATAGCGGAAAGACAAAGGTGGGTTCTATATCTGTCTCTCATGTTGGAGATGACAATACTACGTGGGAAGAAGCCCATGCGACTCTTATTGTCCACCCTAAAAGTGAAGGTAAGCAACATGTAGAGTTGAATGCCATGTCTGTTTCTGCAAGGGCTTGAAACTTATATTACCATATGGTCAAAGGGGCTTTATTGTTTTATATCCATCTGTCTATTCCTCCTGATTTCTTCTGTATATAGAAAGTAATTGTGCTCCTGAACAGAACCATGTATGTATGTATATATATGTGCATATTAACGTTATCAAGTATGTGATGTGGATCAATCAAATAAGAAATTTGATTTCTTGTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g068920.2.1SL2.50ch02:38803018..38811105536-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g068920.2SL2.50ch02:38802826..388114248,599-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g068920.2.1.1SL2.50ch02:38810865..38811424560-2
exonexon:Solyc02g068920.2.1.10SL2.50ch02:38804394..3880444754-n/a
exonexon:Solyc02g068920.2.1.11SL2.50ch02:38802826..38803435610-n/a
exonexon:Solyc02g068920.2.1.2SL2.50ch02:38810593..3881068492-n/a
exonexon:Solyc02g068920.2.1.3SL2.50ch02:38807936..38808054119-1
exonexon:Solyc02g068920.2.1.4SL2.50ch02:38807455..38807590136-n/a
exonexon:Solyc02g068920.2.1.5SL2.50ch02:38807250..3880730152-2
exonexon:Solyc02g068920.2.1.6SL2.50ch02:38805856..38805956101-n/a
exonexon:Solyc02g068920.2.1.7SL2.50ch02:38805125..38805307183-n/a
exonexon:Solyc02g068920.2.1.8SL2.50ch02:38804732..38804889158-1
exonexon:Solyc02g068920.2.1.9SL2.50ch02:38804567..3880462155-n/a
intronintron:Solyc02g068920.2.1.10SL2.50ch02:38804448..38804566n/a-n/a
intronintron:Solyc02g068920.2.1.11SL2.50ch02:38803436..38804393n/a-n/a
intronintron:Solyc02g068920.2.1.2SL2.50ch02:38810685..38810864n/a-n/a
intronintron:Solyc02g068920.2.1.3SL2.50ch02:38808055..38810592n/a-n/a
intronintron:Solyc02g068920.2.1.4SL2.50ch02:38807591..38807935n/a-n/a
intronintron:Solyc02g068920.2.1.5SL2.50ch02:38807302..38807454n/a-n/a
intronintron:Solyc02g068920.2.1.6SL2.50ch02:38805957..38807249n/a-n/a
intronintron:Solyc02g068920.2.1.7SL2.50ch02:38805308..38805855n/a-n/a
intronintron:Solyc02g068920.2.1.8SL2.50ch02:38804890..38805124n/a-n/a
intronintron:Solyc02g068920.2.1.9SL2.50ch02:38804622..38804731n/a-n/a
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Related viewsNone found
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