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Solanum lycopersicum mRNA Solyc02g064830.2.1

mRNA details  
Name
Solyc02g064830.2.1
Type
mRNA
Length
2,096
Organism
Solanum lycopersicum
Description
Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter
Location(s)
SL2.50ch02:35957104..35959463
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
2360
Nb exon
4
Sifter term
GO:0010279
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g064830.2.1 Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter

CACACAAAAAAAAGATCTTTCTTAGTATTTTCAATTTTCTCTCATAATGACCATGCATACTAGTCTTTCATCGTGTCGTCTTGGGCCGCCAGCATGTGAGAAGGATGCTAAGGCCCTTCAATTCATCGAAGAGATGACTAGAAATGTTGATTCAGTTCAAGAGAAAGTTTTGGCTGAAATACTAAGCCAAAATGCCAACACTGAGTATCTTCAAAGATTCAAACTTGGTGGTGCTACGGACCGGGATACATTCAAGTCCAAAATGCCAATAATTACATATGAGGAAATTCAACCTGATATTCAACGTATTGCTAATGGAGATCGTTCTCCGATTTTCTCATCTCATCCCGTCTCTGAGTTCCTCACCAGCTCGGGGACATCTGCTGGTGAGAGAAAACTGATGCCCACAACTCAAGATGAGTTAGACCGAAAACAGCTATTGTACAGCCTTCTCATGCCCGTGATGAATCTGTGCGTTCCTGATCTAGACAAAGGCAAGGGCTTGTACTTTTTATTTATAAAAGCAGAAACCAAGACACCAAGTGGGCTACTAGCAAGACCTGTCTTGACAAGTTACTACAAAAGTGATCACTTCAAGACGAGGCCATACGATCCTTACAATGTGTATACTAGCCCTAACGAGGCTGTTCTCTGTGTCGACTCTTTCCAGAGCATGTACTCACAAATGCTTTGTGGCCTTCTTATGAGAGAACAAGTCCTCCGGTTAGGGGCTGTTTTCGCCTCTGGTTTACTTCGAGCTATTCATTTTCTGCAACTCAATTGGCAGCAACTTGCTGATGATATCGCATCTGGGATATTAAATCCCAGAGTTTCCGACCCTTCAATCAGGGAATGCATCTCCAAAATACTCAAACCAAATCACGAACTCGCAGAGTTCATTATCAAGGAATGCGAAAAACAGAACTGGGAAGGGATTATTACTAGAATTTGGACAAATACAAAGTACCTGGATGTGATTGTGACAGGTGCAATGGCTCAGTACATCCCTACGCTCGACTATTACAGTGGTGGTTTACCAAAGGCATGTACCATGTACGCATCGTCCGAGTGTTATTTTGGCCTTAATTTAAACCCAATTTGCAAGCCATCTGAAGTAAGTTACACTATAATGCCCAATATGTGCTACTATGAATTTATCCCTCACGACTCAGCCAATCCTAGTGACTCACCACGCCGTCTCGTTGACCTAGCTAACGTGGAAGTGGGAAAAGAGTATGAGCTCGTGATCACAACCTACGCTGGATTATGTCGTTACAGAGTCGGTGACATACTACAGGTCACAGGGTTTCACAACTCTGCCCCTCAGTTTAAATTCATAAGAAGGAAAAATGTGCTATTGAGCATTGATTCGGACAAAACTGATGAGGCAGAGTTGCAAAACGCGGTTGATAGCGCTGCTGCCATTTTGCGTCTGTACAATACTAGCGTGGTCGAGTACACTAGTTATGCCGACACCAAAACCATTCCAGGACATTATGTTATTTACTGTGAATTACTTATTAAGGACCCAACCAATTCGCCGAGCCACGAGGTTTTGAATCAATGTTGTTTGGCTATGGAAGAATGTTTGAACTCGGTTTATCGACAGTGCCGAGTTGCAGATAACTCGATTGGACCACTTGAAATTAGAGTAGTGGAAAATGGTACATTTGAAGAGCTAATGGACTATGCAATTTCTAGAGGTGCATCTATAAATCAGTATAAGGCTCCTAGGTGTGTTAATTTTACACCTATAGCGGAATTATTAAACTCCAGGGTAATTTCAGTGCACTTTAGTCCAGGTGCACCTCATTGGGCCCCAGAACGACAGCGTTTACAATTTTAATGATGAAGTTAATTCAAGTCATGATCGAGACCACATAAGTGGAATAAAATCTTTTTTTTTTCTTTTTGTATCTTTGTGAGTAGAGTTGAATATTCAACGTTGATATTAATTAGTCAATTTACTCATGAGAAGTGTTTTAGTTGTCTTGATTGGTTTGAAATCGCAATCCTATGTGTTGAATATTTATTGGAATGTGTTGATATTCATTTCGAGAAGTTCTCGGCCTATTTACTTGATTTCCAAATTTGAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g064830.2.1SL2.50ch02:35957353..35959417600-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g064830.2SL2.50ch02:35957104..359594632,360-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g064830.2.1.1SL2.50ch02:35959095..35959463369-1
exonexon:Solyc02g064830.2.1.2SL2.50ch02:35958916..35959017102-1
exonexon:Solyc02g064830.2.1.3SL2.50ch02:35958331..35958845515-2
exonexon:Solyc02g064830.2.1.4SL2.50ch02:35957104..359582131,110-n/a
intronintron:Solyc02g064830.2.1.2SL2.50ch02:35959018..35959094n/a-n/a
intronintron:Solyc02g064830.2.1.3SL2.50ch02:35958846..35958915n/a-n/a
intronintron:Solyc02g064830.2.1.4SL2.50ch02:35958214..35958330n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17720045%2Fdetails feature 17720045
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