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Solanum lycopersicum mRNA Solyc02g062950.2.1

mRNA details  
Name
Solyc02g062950.2.1
Type
mRNA
Length
1,483
Organism
Solanum lycopersicum
Description
G-box binding factor (AHRD V1 **** Q43449_SOYBN); contains Interpro domain(s) IPR012900 G-box binding, MFMR
Location(s)
SL2.50ch02:34890261..34899997
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045263
  • GO:0006355
Length
9737
Nb exon
12
Sifter term
  • GO:0005515
  • GO:0043565
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g062950.2.1 G-box binding factor (AHRD V1 **** Q43449_SOYBN); contains Interpro domain(s) IPR012900 G-box binding, MFMR

TGGTGATAAAAGATGGGGAAAGTTGGGTTTTTTTTTTGGCTAGTTAGATTTAAGGAGAGGCAAAGAAAGAAGAAGAAACCAAAAGAAAAATAAAAGAATTGTTTGTGTGTCTATCCGAGTTGGACTCTCGTTGTTCCACCTCACACACAGGTACATCTTGCTTTTAAATGAGCACTTGATCTTCTGAAGTAATCAAACAAACGCTGACACTTGACTATTGATTCGACACCTAATGGGAGCTGGGGAAGAGAGCACCCCTGCAAAGCCTTCGAAAGTTACTTCGACTCAGGAAACACAAGCAACACCTTCATATCCTGATTGGTCTTCTATGCAGGCTTATTATGGTGCTGGAGCTACACCTCCCTTCTTTCCCTCAACTGTTGGTTCTCCCACTCCCCACCCGTACATGTGGGGAGCCCAGCATCCGCTTATGCCTCCTTATGGAGCCCCAGTCCCATATCCTGCTTTATATCCTCCTGCTGGAGTTTATGCTCATCCTAATATGCCTATGACTCCAAACACACTGCAGGCAAATCCAGAATCAGATAGTAAGGCACCAGATGGTAAGGACCAGAATACAAGCAAAAAATTGAAGGGATGTTCAGGTGGCAAGGCAGGAGAAAGTGGGAAAGCGGCCTCAGGTTCTGGAAATGATGGTGGTGCCACAAGAAGTGCTGAAAGCGGAAGTGAAGGTTCATCAGACGAAAATGATGAAAATGATAACCATGAATTTTCTGCTGACAAAAATAGAAGCTTTGATCTAATGCTTGCTAATGGAGCCAATGCTCAGACCAATCCTGCAACAGGGAATCCAGTCGCTATGCCCGCACCTAATCTGAATATTGGGATGGATTTGTGGAACGCACCTTCTGGCGGTCCCGGAATGATCAAAATGCGATCAAATCAATCTGGTGTCTCGCCAGCTCCTGGGATGGGACGTGAATGGATTCAGGATGAACGTGAACTTAAAAGGCAAAAGAGAAAGCAGTCTAATAGAGAATCAGCTCGGAGGTCGAGATTACGCAAGCAGGCTGAGTGTGAAGAGCTACAACATAAGGTAGAGACATTGAGCAATGAGAATCATGGACTCAAAGAGGAGTTGCGAAAGGTCTCTGAGGAATGTGAGaagcttaccTCGGAGAATAATTCAATAAAGGATGAGTTGACGAGGTTGTATGGGCCAGAGGCTGTGTCCAAGCTAGAGAGTAATGCCAACGCCATGCGTCTTCAGTCCAATGTTGAGGAAGCTAAGAGTTGAGGACAAGCCATGACAGAGTAACTTATTTTGGTTAAAATGCTCAAAAATCTCTTACTGCCCGTGGGAAATCTATAGCTTTTACCGTGCGTTAGAAGTAGAAATCTCTGCTTTTCTACTAATTTATGTCCTTTTTAACCCTTTTGAGTGAAATTTATAACATTAATTCTTGGATTTTTAACCCAGGTTTGAATCTTAATCTATGACAACAACTGAATAGCTTGATCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g062950.2.1SL2.50ch02:34890485..34896834342-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g062950.2SL2.50ch02:34890261..348999979,737-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g062950.2.1.1SL2.50ch02:34899848..34899997150-n/a
exonexon:Solyc02g062950.2.1.10SL2.50ch02:34893756..3489383378-n/a
exonexon:Solyc02g062950.2.1.11SL2.50ch02:34890872..34890997126-n/a
exonexon:Solyc02g062950.2.1.12SL2.50ch02:34890261..34890587327-n/a
exonexon:Solyc02g062950.2.1.2SL2.50ch02:34896778..34896916139-n/a
exonexon:Solyc02g062950.2.1.3SL2.50ch02:34896599..3489664345-n/a
exonexon:Solyc02g062950.2.1.4SL2.50ch02:34896401..3489648787-n/a
exonexon:Solyc02g062950.2.1.5SL2.50ch02:34896185..3489627490-n/a
exonexon:Solyc02g062950.2.1.6SL2.50ch02:34895897..34896057161-1
exonexon:Solyc02g062950.2.1.7SL2.50ch02:34895715..3489576955-n/a
exonexon:Solyc02g062950.2.1.8SL2.50ch02:34895553..3489560149-2
exonexon:Solyc02g062950.2.1.9SL2.50ch02:34895302..34895477176-n/a
intronintron:Solyc02g062950.2.1.10SL2.50ch02:34893834..34895301n/a-n/a
intronintron:Solyc02g062950.2.1.11SL2.50ch02:34890998..34893755n/a-n/a
intronintron:Solyc02g062950.2.1.12SL2.50ch02:34890588..34890871n/a-n/a
intronintron:Solyc02g062950.2.1.2SL2.50ch02:34896917..34899847n/a-n/a
intronintron:Solyc02g062950.2.1.3SL2.50ch02:34896644..34896777n/a-n/a
intronintron:Solyc02g062950.2.1.4SL2.50ch02:34896488..34896598n/a-n/a
intronintron:Solyc02g062950.2.1.5SL2.50ch02:34896275..34896400n/a-n/a
intronintron:Solyc02g062950.2.1.6SL2.50ch02:34896058..34896184n/a-n/a
intronintron:Solyc02g062950.2.1.7SL2.50ch02:34895770..34895896n/a-n/a
intronintron:Solyc02g062950.2.1.8SL2.50ch02:34895602..34895714n/a-n/a
intronintron:Solyc02g062950.2.1.9SL2.50ch02:34895478..34895552n/a-n/a
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Related viewsNone found
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