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Solanum lycopersicum mRNA Solyc02g021650.2.1

mRNA details  
Name
Solyc02g021650.2.1
Type
mRNA
Length
3,676
Organism
Solanum lycopersicum
Description
DNA damage-binding protein 1 (AHRD V1 **** C0H989_SALSA); contains Interpro domain(s) IPR004871 Cleavage and polyadenylation specificity factor, A subunit, C-terminal
Location(s)
SL2.50ch02:23362148..23382543
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
20396
Nb exon
19
Sifter term
  • GO:0005515
  • GO:0003684
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g021650.2.1 DNA damage-binding protein 1 (AHRD V1 **** C0H989_SALSA); contains Interpro domain(s) IPR004871 Cleavage and polyadenylation specificity factor, A subunit, C-terminal

TGAACTCTGTCAACATACTAGATGTTTCTCTTCATTGCCGATATATATATGCTGTGTCTCGTTTTCCCCCATTTGTGTCTCTTTTCTATTTTCAAGTGATTCAACTGAAACAAGTATTAGGGTTTGTAGGTATAGCGGGAAGAGGGAAGATACAAGATGAGTGTATGGAACTACGTGGTTACGGCTCACAAACCAACAAATGTTACACATTCCTGTGTTGGCAATTTCACCGGTCCTCAAGAGCTCAATCTTATCATTGCGAAATGTACTCGAATCGAGATTCATTTACTTACTCCCCAAGGTTTACAGTGCATTTGTCTGCAGCCTATGTTAGATGTGCCAATATATGGGAGGATCGCGACACTTGAGCTTTTTCGTCCTCACGGTGAAACACAAGATCTTCTCTTCATCGCAACAGAGCGATATAAATTCTGTGTCCTTCAATGGGATACTGAGGCATCTGAAGTTATCACAAGAGCAATGGGAGATGTGTCAGACCGAATAGGCCGTCCCACAGATAATGGTCAGATTGGTATAATTGATCCAGATTGCAGATTGATCGGGCTACATCTTTATGATGGACTATTTAAGGTTATTCCATTTGATAACAAAGGCCAACTGAAGGAAGCTTTTAACATCAGGCTCGAGGAGCTTCAAGTTTTAGATATTAAATTCTTGTATGGTTGCCCAAAGCCTACAATTGTTGTTCTATATCAGGATAACAAGGATGCCCGGCATGTCAAAACATATGAGGTGTCCTTGAAAGACAAAGATTTTATTGAAGGGCCATGGGCTCAAAATAATCTTGATAATGGAGCTTCTTTGCTAATACCAGTACCTCCACCACTGTGTGGTGTATTGATTATTGGAGAAGAAACCATCGTTTATTGCAGCGCTTCAGCTTTTAAGGCTATCCCAATTAGACCTTCTATCACAAGAGCATATGGGCGGGTTGATGCTGATGGTTCTCGATATTTGCTTGGGGATCATAATGGGCTTCTTCACCTACTTGTAATCACTCATGAGAAGGAGAAAGTTACCGGACTCAAAATTGAGCTACTGGGGGAAACTTCTATTGCATCAACCATATCATACCTAGACAATGCTTTTGTCTTCATTGGCTCAAGCTACGGAGATTCACAGCTTGTAAAGCTCAATCTCCAGCCTGACACCAAAGGTTCTTATGTGGAAGTTCTAGAGAGATATGTCAATTTAGGACCTATTGTGGACTTCTGTGTTGTTGATCTGGAAAGGCAAGGTCAAGGTCAGGTTGTAACTTGCTCTGGAGCCTATAAGGATGGATCACTTCGTATTGTTCGAAATGGAATTGGCATAAATGAACAGGCGTCTGTGGAACTACAAGGGATCAAAGGAATGTGGTCTCTTAGATCTGCTACTGATGATCCATATGACACATTCTTGGTTGTTAGCTTCATTAGTGAGACACGCGTTTTGGCTATGAACCTTGAGGATGAGCTGGAAGAAACTGAGATAGAAGGCTTCAATTCTCAAGTCCAGACCTTGTTTTGTCATGATGCTGTATACAACCAGCTTGTTCAGGTTACTTCAAATTCTGTTAGATTGGTCAGTTCTACCTCTAGAGATCTGAAAAACGAGTGGTTTGCCCCAGTCGGCTACTCGGTCAATGTTGCAACTGCTAATGCCACTCAGGTACTATTGGCTACTGGGGGTGGCCATCTGGTATACCTAGAAATTGGTGATGGGGTGTTGAATGAAGTAAAATATGCCAAGTTGGATTATGATATCTCGTGCCTGGACATAAATCCAATTGGTGAAAATCCGAACTACAGTAACATTGCAGCAGTTGGAATGTGGACAGACATAAGTGTCAGGATATATTCACTTCCTGACTTGAATCTCATTACAAAGGAACAGCTAGGAGGGGAGATAATTCCTCGTTCTGTTCTGATGTGTTCCTTCGAAGGGATATCTTATCTACTATGTGCTTTGGGAGATGGCCATCTCTTGAATTTTGTATTGAGCATGAGTACTGGTGAGCTGACAGATAGGAAAAAAGTTTCTCTTGGGACACAGCCCATAACACTTCGTACATTCTCATCTAAAGATACTACACATGTCTTTGCTGCCTCCGATAGGCCAACAGTTATTTACAGCAGTAACAAGAAGCTGCTTTATAGCAATGTAAATCTAAAAGAAGTTAGTCATATGTGCCCATTCAATGTTGCAGCTTTTCCAGACAGCCTTGCAATCGCTAAAGAAGGTGAGTTAACAATTGGCACTATTGATGAAATTCAAAAGCTTCACATTCGTTCAATACCCCTTGGGGAGCATGCACGTCGCATCAGCCATCAAGAGCAGACCCGGACATTTGCTCTATGCAGTGTGAAGTATACTCAGTCAAATGCAGATGATCCTGAAATGCATTTTGTCCGCCTGTTGGATGATCAGACATTTGAGTTCATATCAACATATCCCCTTGACCAATTTGAATATGGCTGTTCCATACTAAGCTGCTCCTTTTCTGATGATAGTAATGTGTATTATTGCATTGGAACTGCATATGTGATGCCAGAGGAAAATGAACCTACTAAGGGCCGAATTTTAGTTTTTATAGTTGAAGATGGAAAGCTCCAGCTAATTGCTGAGAAGGAAACTAAGGGAGCTGTCTACTCTCTAAATGCCTTCAATGGGAAACTGCTTGCTGCAATCAATCAGAAGATTCAATTGTACAAGTGGGCTTCGCGTGAGGATGGTGGCAGCCGAGAATTGCAGACAGAATGTGGACACCATGGTCATATATTAGCTCTTTATGTTCAAACACGTGGGGATTTCATTGTTGTTGGTGATTTGATGAAATCCATTTCTCTGCTGATTTTCAAGCATGAAGAGGGTGCTATAGAGGAGCGAGCCAGAGACTATAATGCAAATTGGATGTCAGCTGTTGAGATTCTCGATGATGACATTTATCTTGGTGCTGAGAATAACTTCAACCTTTTCACGGTCAGGAAAAATAGTGAAGGTGCTACAGATGAGGAGCGCAGCCGTCTTGAAGTGGTTGGTGAATACCACCTTGGCGAATTTGTTAATAGGTTTAGACATGGTTCACTTGTCATGCGACTACCAGATTCAGATGTTGGGCAGATACCCACTGTCATATTTGGCACAGTGAATGGTGTTATAGGGGTGATTGCATCACTACCTCATGATCAATATTTATTTTTGGAGAAGCTGCAGACAAACTTACGGAAAGTGATAAAGGGTGTGGGAGGTCTGAGCCATGAGCAGTGGAGGTCGTTTTACAATGAGAAGAAAACAGTAGATGCTAAAAACTTTCTTGATGGAGATTTGATTGAATCATTCCTAGATCTTAGCAGGAATAGGATGGAAGAGATTTCAAAGGCTATGTCAGTTCCAGTTGAGGAACTAATGAAGAGAGTGGAAGAGTTGACAAGGTTGCATTAGTTGAATCTTTAATGGTCTCAACTCTGTAATATTTCACATTTCTTAATTTTTTCTTCTTCTTCTTCTGTGAGGTTGTGATACAAGTTCTTATCCCTATATCTGTACTTATTATCTCATATACTTTTAATAGCTGTTGAATTTTTATTTTAAGTTGAAAAAGAATCATTTGCAAACCCAAATGTCCAATTTTTTGGCTCCCATTTAATTGCATCCTACGGAGTTGATTGCACGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g021650.2.1SL2.50ch02:23362379..233823871,096-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g021650.2SL2.50ch02:23362148..2338254320,396-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g021650.2.1.1SL2.50ch02:23382284..23382543260-1
exonexon:Solyc02g021650.2.1.10SL2.50ch02:23374204..23374310107-1
exonexon:Solyc02g021650.2.1.11SL2.50ch02:23373967..23374075109-n/a
exonexon:Solyc02g021650.2.1.12SL2.50ch02:23373585..23373785201-n/a
exonexon:Solyc02g021650.2.1.13SL2.50ch02:23373280..23373495216-n/a
exonexon:Solyc02g021650.2.1.14SL2.50ch02:23371686..23371796111-n/a
exonexon:Solyc02g021650.2.1.15SL2.50ch02:23367041..23367316276-n/a
exonexon:Solyc02g021650.2.1.16SL2.50ch02:23364680..23364954275-1
exonexon:Solyc02g021650.2.1.17SL2.50ch02:23363973..23364324352-n/a
exonexon:Solyc02g021650.2.1.18SL2.50ch02:23363111..23363398288-n/a
exonexon:Solyc02g021650.2.1.19SL2.50ch02:23362148..23362961814-n/a
exonexon:Solyc02g021650.2.1.2SL2.50ch02:23381921..2338196949-n/a
exonexon:Solyc02g021650.2.1.3SL2.50ch02:23377526..2337760075-n/a
exonexon:Solyc02g021650.2.1.4SL2.50ch02:23377318..2337740992-1
exonexon:Solyc02g021650.2.1.5SL2.50ch02:23376738..2337678952-n/a
exonexon:Solyc02g021650.2.1.6SL2.50ch02:23376516..2337657863-n/a
exonexon:Solyc02g021650.2.1.7SL2.50ch02:23376344..2337639350-1
exonexon:Solyc02g021650.2.1.8SL2.50ch02:23375003..2337507876-n/a
exonexon:Solyc02g021650.2.1.9SL2.50ch02:23374483..23374692210-n/a
intronintron:Solyc02g021650.2.1.10SL2.50ch02:23374311..23374482n/a-n/a
intronintron:Solyc02g021650.2.1.11SL2.50ch02:23374076..23374203n/a-n/a
intronintron:Solyc02g021650.2.1.12SL2.50ch02:23373786..23373966n/a-n/a
intronintron:Solyc02g021650.2.1.13SL2.50ch02:23373496..23373584n/a-n/a
intronintron:Solyc02g021650.2.1.14SL2.50ch02:23371797..23373279n/a-n/a
intronintron:Solyc02g021650.2.1.15SL2.50ch02:23367317..23371685n/a-n/a
intronintron:Solyc02g021650.2.1.16SL2.50ch02:23364955..23367040n/a-n/a
intronintron:Solyc02g021650.2.1.17SL2.50ch02:23364325..23364679n/a-n/a
intronintron:Solyc02g021650.2.1.18SL2.50ch02:23363399..23363972n/a-n/a
intronintron:Solyc02g021650.2.1.19SL2.50ch02:23362962..23363110n/a-n/a
intronintron:Solyc02g021650.2.1.2SL2.50ch02:23381970..23382283n/a-n/a
intronintron:Solyc02g021650.2.1.3SL2.50ch02:23377601..23381920n/a-n/a
intronintron:Solyc02g021650.2.1.4SL2.50ch02:23377410..23377525n/a-n/a
intronintron:Solyc02g021650.2.1.5SL2.50ch02:23376790..23377317n/a-n/a
intronintron:Solyc02g021650.2.1.6SL2.50ch02:23376579..23376737n/a-n/a
intronintron:Solyc02g021650.2.1.7SL2.50ch02:23376394..23376515n/a-n/a
intronintron:Solyc02g021650.2.1.8SL2.50ch02:23375079..23376343n/a-n/a
intronintron:Solyc02g021650.2.1.9SL2.50ch02:23374693..23375002n/a-n/a
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