Solanum lycopersicum mRNA Solyc02g020980.2.1

mRNA details  
Name
Solyc02g020980.2.1
Type
mRNA
Length
3,272
Organism
Solanum lycopersicum
Description
4-alpha-glucanotransferase (AHRD V1 **** Q6R608_SOLTU); contains Interpro domain(s) IPR003385 Glycoside hydrolase, family 77
Location(s)
SL2.50ch02:20819233..20860981
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0030246
  • GO:0005975
Length
41749
Nb exon
22
Sifter term
  • GO:0004134
  • GO:0010297
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g020980.2.1 4-alpha-glucanotransferase (AHRD V1 **** Q6R608_SOLTU); contains Interpro domain(s) IPR003385 Glycoside hydrolase, family 77

ACTTATCCAAAATGAAAGATAGAAATTGGGATAGAGGGAGGATATGCTTTACGCAAATTCAATCTCTACATTGGATACTCTGAAACCGATTGACATTTTTTGTACAACTAATTAGTTGGTTTAGCTACATTTTGAGGAGTTCACTTGGTTTTATTCAGTTTAAGATGGTGAATTCGGGGTTGAAGTCAAGGAAGGTGAGCTTCAGAATCCCATACTATACTCAGTGGGGGCAGAACGTTCTCATCTGTGGTTCAGATCGGTTGCTTGGTTCATGGAATGTGAAAAAGGGTCTATTATTGAAGCCTTCTCACCAAGGGGAAGAGCTTATATGGTCTGGAAGCATTCCAGTTCCTCCTGGATATCAAAGTGAGTACAGTTACTATGTGGTGGATGATAGAAGAAATATCCTGCGATGGGAGGTTGGAAAGAAAAGGAAACTGTTGCTTCCTGATGGATTTCAGGATGGGCAATCACTAGAACTTCATGATCTCTGGCAGACTGGTTCTGACAATATCCCTTTTAGAAGTGCATTTAAGGATGTCATCTTTCGGACAAGTTGGAGTTTGGGCGGTGAAAGGCCCTTGGAGATCACTCAGAATAAGCTGGACCAGGATGGTTCAGTTAATCTGCAATTTAGAATTTGCTGCCCCTATTTAGAGGAAGGAACATCTATTTATGTGCTTGGCAGCTCCTTAAATCTTGGGCAATGGAAGATTCAGGATGGCCTTAAGCTTGCATATGCTGGGGATTCATTATGGCAGGCAGCCTGCGTTATGGGAAAAGATGACTTCCCTTTAAAATACAAGTACTGCAAACATAGTAAGGCTGGAACATCAGTGGAATGTGGTGCCAGTCGCGAGATTTCTGTTGATGTCACAATAGGTGAATCTAAATTTGTAGTTCTTTCAGATGGCTTAATGCGGGAAATGCCATGGAGGGGAGCAGGTGTCTCAATACCCATGTTTTCCGTACGGTCAGAGGCTGATCTTGGAGTTGGGGAGTTTCTTGACCTGAAGTTACTTGTAGATTGGGCCGTTGAATCTGGCTTTCATTTGGTTCAGCTTTTGCCCATCAATGATACATCAGTCAACTGTATGTGGTGGGATTCGTACCCTTATAGCTCTCTCTCAGTATTTGCCTTGCACCCATTGTACCTACGGGTAGAGGCCATTTCAGCGAACATTCCAGAGGATATCAAGCAAGAGATCAGGGAGGCAAGAGTTCAGTTGGATAAAAAGGATGTAGATTATGAAGCTTGCATGGCTACAAAACTTTCTATTGCCAAGAAAATTTTCGCTCGGGAGAAGGAGACAATACTAAACTCAAAATCATTCCAGGAGTTCTTCTCTGAAAATCAGGAATGGTTGAAACCCTATGCTGCTTTCTGTTTTCTGCGGAACTTCTTCGAAACATCCGAGCGCAGTCAATGGGGCCGGTTTTCTGAATTTTCAAAAGAAAAGCTTGAGAAGCTACTCTCTAAAGAAAGCTTGCACTATGAAGTTGTTAGTTTTTATTACTACATCCAGTTCCATTTGCATCTACAATTATCAGAAGCTGCGGAATATGCACGAAAGAAAGGTGTAGTGCTGAAAGGTGACCTGCCCATTGGTGTTGACAGGAATAGTGTCGATACCTGGGTCTACCCAAATTTGTTTCGCATGAACACCTCAACTGGGGCCCCCCCTGACTATTTTGATAAAAACGGCCAGAATTGGGGATTCCCCACTTATAATTGGGAAGAAATGTCAAAAGATAACTATGGTTGGTGGCGTGCTCGTCTAACACAGATGGGGAAGTACTTTACAGCTTATAGGATTGATCACATATTGGGATTCTTCAGAATATGGGAGCTCCCAGAACATGCAATGACTGGCCTTTGTGGAAAATTTCGACCTTCTATTCCTATTAGTCAGGAAGAACTCGAGTCAGAAGGATTATGGGACTTCAACCGTCTTACCCATCCTTATATTGGACAAGATCTTTTACAGGAAAAATTCGGAGCTTCTTGGACTATAATTGCCTCTACCTTTTTGAATGAATATCAGAAGGGCTTTTACGAGTTCAAGGACAAATGCAATACTGAGAAGAAAATTGCATCTGCGCTGAAGTCAGTCTTGGAAACATCCATGTTTTTAGAGAGTGAAGTGAAACTACGACGAAAACTCTTTGATCTTCTGCAGAATGTGGCGCTTATTAACGATCCAGAAGATCCAAGAAAGTTTTACCCTCGCTTCAATGTTGAAGACACAACAAGCTTTATGGATTTGGATCAGCACAGTCAAAATGTCCTAAAAAGATTATACTATGATTACTACTTCCATCGACAAGAAGGTCTTTGGCGTGACAATGCCTTTAAGACTCTGCCTGTTCTTTTGAACTCATCAGACATGCTCGCTTGTGGGGAAGACCTAGGCCTAATTCCCTCCTGTGTTCATCCTGTTATGCAAGAACTGGGCTTAGTAGGCCTACGCATTCAACGCATGCCAAGTGAACCTGATCTAGAATTTGATATTCCTTCTCAATACAACTACATGACGGTTTGTGCTCCATCATGCCATGACTGTTCTACTCTACGTGCTTGGTGGGAGGAAGATGAAGAGAGAAGGCACCGCTTTTTTCAAGCAGTGATGGGATCTGATGAGTTGCCACCTGATCAATGCACTCCTGAAATTGTGCACTTTGTCTTGCGACAGCATGTTGAAGCCCCATCAATGTGGTCAATATTTCCCCTCCAGGATTTGCTAGCACTTAAAGAAGATTACACGACACGGCCTGCAGTGGAAGAGACTATCAATGATCCAACAAACCCAAAACATTATTGGCGATATCGTGTACACGTGACAATGGAGTCCTTGCTTAATGATAAAGACCTCACAAAAACAATAAAGGATCTCGTCCATGGGAGTGGAAGGTTTTACCCTCAGAAAGATCTGGAATCAGGTCACACAATTGGTGAAGGATCAGCAAAGCTGCAGCTACAGAGTGAACACCCTTCACAAACACAGAAAAATGGACTCTCCAACAAATAAGCCGTGGCATTTGTATGACTATAAAACAATTTCCGTCTTTTAGATGCTCAGGTCAAAGACGAAACAAATAAATCCTCCATGGCCTAGTCCGTCATGTGGTTCAATAGCTTGTCTTGCTTCATCATTAAACTGGATTTGAAGCTATATTTCATCAAAGAAATAAAGGAATCATTGTATGTTACTCTTTTGATTCTCTTCAAGTGATGAAACTTGGTCAAAGATCAAGCCCTTTACTTGGTGTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g020980.2.1SL2.50ch02:20819475..20860817955-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g020980.2SL2.50ch02:20819233..2086098141,749-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g020980.2.1.1SL2.50ch02:20860485..20860981497-n/a
exonexon:Solyc02g020980.2.1.10SL2.50ch02:20853360..20853461102-n/a
exonexon:Solyc02g020980.2.1.11SL2.50ch02:20853176..2085325984-n/a
exonexon:Solyc02g020980.2.1.12SL2.50ch02:20852835..20853077243-n/a
exonexon:Solyc02g020980.2.1.13SL2.50ch02:20852613..20852738126-n/a
exonexon:Solyc02g020980.2.1.14SL2.50ch02:20852417..2085249175-n/a
exonexon:Solyc02g020980.2.1.15SL2.50ch02:20839505..2083957672-n/a
exonexon:Solyc02g020980.2.1.16SL2.50ch02:20825425..20825544120-n/a
exonexon:Solyc02g020980.2.1.17SL2.50ch02:20825168..2082526598-1
exonexon:Solyc02g020980.2.1.18SL2.50ch02:20824797..20824956160-n/a
exonexon:Solyc02g020980.2.1.19SL2.50ch02:20824603..2082470199-n/a
exonexon:Solyc02g020980.2.1.2SL2.50ch02:20856458..20856575118-2
exonexon:Solyc02g020980.2.1.20SL2.50ch02:20823787..20823984198-n/a
exonexon:Solyc02g020980.2.1.21SL2.50ch02:20822830..2082292394-2
exonexon:Solyc02g020980.2.1.22SL2.50ch02:20819233..20819675443-n/a
exonexon:Solyc02g020980.2.1.3SL2.50ch02:20856324..2085637956-n/a
exonexon:Solyc02g020980.2.1.4SL2.50ch02:20856072..20856199128-1
exonexon:Solyc02g020980.2.1.5SL2.50ch02:20855842..20855965124-n/a
exonexon:Solyc02g020980.2.1.6SL2.50ch02:20855548..20855744197-1
exonexon:Solyc02g020980.2.1.7SL2.50ch02:20854401..2085447979-n/a
exonexon:Solyc02g020980.2.1.8SL2.50ch02:20854234..2085427239-n/a
exonexon:Solyc02g020980.2.1.9SL2.50ch02:20853715..20853834120-n/a
intronintron:Solyc02g020980.2.1.10SL2.50ch02:20853462..20853714n/a-n/a
intronintron:Solyc02g020980.2.1.11SL2.50ch02:20853260..20853359n/a-n/a
intronintron:Solyc02g020980.2.1.12SL2.50ch02:20853078..20853175n/a-n/a
intronintron:Solyc02g020980.2.1.13SL2.50ch02:20852739..20852834n/a-n/a
intronintron:Solyc02g020980.2.1.14SL2.50ch02:20852492..20852612n/a-n/a
intronintron:Solyc02g020980.2.1.15SL2.50ch02:20839577..20852416n/a-n/a
intronintron:Solyc02g020980.2.1.16SL2.50ch02:20825545..20839504n/a-n/a
intronintron:Solyc02g020980.2.1.17SL2.50ch02:20825266..20825424n/a-n/a
intronintron:Solyc02g020980.2.1.18SL2.50ch02:20824957..20825167n/a-n/a
intronintron:Solyc02g020980.2.1.19SL2.50ch02:20824702..20824796n/a-n/a
intronintron:Solyc02g020980.2.1.2SL2.50ch02:20856576..20860484n/a-n/a
intronintron:Solyc02g020980.2.1.20SL2.50ch02:20823985..20824602n/a-n/a
intronintron:Solyc02g020980.2.1.21SL2.50ch02:20822924..20823786n/a-n/a
intronintron:Solyc02g020980.2.1.22SL2.50ch02:20819676..20822829n/a-n/a
intronintron:Solyc02g020980.2.1.3SL2.50ch02:20856380..20856457n/a-n/a
intronintron:Solyc02g020980.2.1.4SL2.50ch02:20856200..20856323n/a-n/a
intronintron:Solyc02g020980.2.1.5SL2.50ch02:20855966..20856071n/a-n/a
intronintron:Solyc02g020980.2.1.6SL2.50ch02:20855745..20855841n/a-n/a
intronintron:Solyc02g020980.2.1.7SL2.50ch02:20854480..20855547n/a-n/a
intronintron:Solyc02g020980.2.1.8SL2.50ch02:20854273..20854400n/a-n/a
intronintron:Solyc02g020980.2.1.9SL2.50ch02:20853835..20854233n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17713869%2Fdetails feature 17713869
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