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Solanum lycopersicum mRNA Solyc02g014770.2.1

mRNA details  
Name
Solyc02g014770.2.1
Type
mRNA
Length
2,728
Organism
Solanum lycopersicum
Description
Chromodomain-helicase-DNA-binding protein 6 (AHRD V1 **-* CHD6_HUMAN); contains Interpro domain(s) IPR000330 SNF2-related
Location(s)
SL2.50ch02:18358168..18376521
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005524
Length
18354
Nb exon
12
Sifter term
GO:0004003
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g014770.2.1 Chromodomain-helicase-DNA-binding protein 6 (AHRD V1 **-* CHD6_HUMAN); contains Interpro domain(s) IPR000330 SNF2-related

TGGTTTGATTCCCCTAAAATTGAATGAAGTTTTGTTAAGTGAATTTTCAAAATTCCCTCCTCCAAGCCTCTAGGGTTTTTGTCGCTATGAAGCGTGACTATTACGAGATTTCCGACGATGAATGGCCGGAAGACAATTCCTTCAATCCTTCTCGTGTCCTCAAACACAAGCCTTCTGCTCCACCTCCTCCTATTGAGTCCTTTATATACTCCAACACCACCAATCAAAATACCTCAAAATCCTCCAATTTCATCCAAGTTTTAGATAGTTCCTCCGAAGAGATGGGACTCGGAAATGCCTCTGAGAATTTGGAGGACGATGATGTTGAAATTGACTCTACTATCAACCAGACCAACAGCCGTGCCCGCCGAAGATTTGTGGTGGATGATGAAGATGAAGGATTTAACTCAAATGAAGAGGAGGAGTTGTTTGAGCTTTCCGACAACCAGGAGAGTGATGAGGAGGTGGAGGATGTTGTAGGAAAGGCATTGCAAAAGTGTGGGAAAATATCTATGGAGCTTAAGAGAGAGCTTTTTGGTACTGCAGCTGCAAAGTGTGATTCCTTTGTTGAAGTGGAGGAGGCTTCGTCACTAAGAATTGTCACTCAGGATGATATAGACATGGCATGTGGAGAAGAAGATTCGGATTTTAAGCCAATATTAAAACCTTACCAGCTCGTTGGAGTCAATTTCCTCCTTTTGTTGTATAGAAAGAAAATCGGTGGAGCTATTCTGGCTGATGAAATGGGTCTTGGTAAGACCATTCAGGCTATCACATACTTAACATTGCTGAAGCATTTGGAAGATGATCCTGGTCCTCATTTAATTGTTTGTCCTGCCTCTGTTTTGGAGAACTGGGAAAGAGAGCTAAAAAAGTGGTGTCCGGCATTTACTGTGATCCAATATCATGGTTCTGCACGATCATCTTACTCAAAAGACTTGAGTTCTCTTTCTAGGACTGGACAGCCACCTCCATTTAACGTTATCCTTGTGTGCTACTCGCTTTTTGAACGACACAGTGCACAGCAAAAAGATGACCGCAAAATTCTGAAGCGCTGGTGTTGGAGCTGTGTGCTAATGGATGAGGCTCATGCTTTAAAGGATAAAGGCAGCTATAGGTGGAAAAACTTAATGTCTGTTGCACGTAATGCCAACCAGCGACTAATGCTCACTGGCACACCACTTCAAAATGATTTGCATGAACTTTGGTCGATTTTGGAGTTTATGATGCCTGATCTATTTGAAACAGGAGATGTTGACTTGAAAAAACTATTGAATGCAGAAGATAAAGAGTTAATTGCTCGAATAAAGTCCATTCTTGGACCTTTCATTTTGAGAAGATTAAAATCGGATGTGATGAAACAACTGGTACCAAAAATACAGACGGTTCGTTATGTCGGCATGGAGAAACAGCAAGAAGATGCATATAAAGAAGCGATTGAAAGCTACCGTGCTGCATCTCTAGCTCGTGTTTCAAAGCAACCTGTTAGTTTGACTAATGCTGCTGGTGTCTTTTCGAGACGACAAATTTCCAATTATTTTCTTGAATTCCGCAAGATTGCAAACCATCCTCTGCTTGTGAGGCGTATTTATACAGATGATGATGTTGTTCGAATTGCTAGAGTTGTGCATCCCAAAGGTGTCTTTGGTTTTGAATGTACAGTGGACAGAGTAATTGAGGAGCTGAAGAGCTACAATGACTTCTCCATCCACAAGCTTTTACTTTACTATGGTGATAATAATAAGGGAGTGCTGTCAGATGAGCGTGTTATGATTTCAGCTAAATGTCAGGAATTAGCCAAACTTCTCCCTTCATTAAACCTTTCTGGTCATCGAGTGCTTATTTTTAGCCAGTGGACATCAATGCTTGATATCCTGGAGTGGACCCTAGATGTTATAGGTGTTACATACAGGCGCCTGGATGGAAGTACTCAGGTGACGGAGAGACAGACAATTGTTGACACCTTCAATAAGGACACTTCCATATTTGCATGTTTGCTCTCCACAAGGGCTGGAGGACAAGGTTTAAACTTGACAGGAGCTGATACTGTTATCATACATGACATGGATTTTAATCCACAGATAGATCGGCAAGCTGAAGATCGCTGCCACCGGATAGGCCAAAACAAACCAGTTACAGTATACAGGCTGGTTACTAGGAATACTGTTGATGAGAATGTATATGAGATTGCAAAGCGAAAACTTACATTGGATGCAGCTATACTCGAGTCTGGTGCCCAAATTGAGAATGAAGGTGATGCAAAAACTATGGGTGAGATATTATCGTCTCTTCTGCTTGGTTAGGCGCACCATGTTCTGACATGATTCATATCAATATCATTTTGATCTACTGGTTTTCTTTTTCCTCTGTTTTTGCGTTGTGGTTTGCCCTCAAGAACTTCTGAGGGTGAGGATTGCTGTAGGATCCCTCCATACTCATCCTCTCCTGTCAATCATAAAATGCCATGTTCGCGAGGTCCTACCTTTCGGAAACGGAAAATTGAGCCAGTCCCATGCCCCTGTTGTAATATACTAGAATAGATAGACTCCAGTTTATAAAAATGTAAAATACAATGTACTTACGGTCTTGTAGTAGGTAAACCTTTATTTTTGTTTTTATTGTAGCTTTGGTCATGCACTTTCTCCTAGCTGCTGTTATGTCAACTTTTACTTTTATTTTGTGTGTTGGTATTTATTAGAAAAGAAAAAGAAAAGTATACGTTATTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g014770.2.1SL2.50ch02:18358253..18376096739+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g014770.2SL2.50ch02:18358168..1837652118,354+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g014770.2.1.1SL2.50ch02:18358168..18358775608+n/a
exonexon:Solyc02g014770.2.1.10SL2.50ch02:18372762..18372898137+n/a
exonexon:Solyc02g014770.2.1.11SL2.50ch02:18374759..18374977219+n/a
exonexon:Solyc02g014770.2.1.12SL2.50ch02:18375940..18376521582+1
exonexon:Solyc02g014770.2.1.2SL2.50ch02:18358856..18358973118+n/a
exonexon:Solyc02g014770.2.1.3SL2.50ch02:18367683..1836772341+n/a
exonexon:Solyc02g014770.2.1.4SL2.50ch02:18367825..18368075251+2
exonexon:Solyc02g014770.2.1.5SL2.50ch02:18369323..18369503181+n/a
exonexon:Solyc02g014770.2.1.6SL2.50ch02:18371487..18371672186+1
exonexon:Solyc02g014770.2.1.7SL2.50ch02:18371836..18372006171+n/a
exonexon:Solyc02g014770.2.1.8SL2.50ch02:18372087..18372245159+n/a
exonexon:Solyc02g014770.2.1.9SL2.50ch02:18372600..1837267475+n/a
intronintron:Solyc02g014770.2.1.1SL2.50ch02:18358776..18358855n/a+n/a
intronintron:Solyc02g014770.2.1.10SL2.50ch02:18372899..18374758n/a+n/a
intronintron:Solyc02g014770.2.1.11SL2.50ch02:18374978..18375939n/a+n/a
intronintron:Solyc02g014770.2.1.2SL2.50ch02:18358974..18367682n/a+n/a
intronintron:Solyc02g014770.2.1.3SL2.50ch02:18367724..18367824n/a+n/a
intronintron:Solyc02g014770.2.1.4SL2.50ch02:18368076..18369322n/a+n/a
intronintron:Solyc02g014770.2.1.5SL2.50ch02:18369504..18371486n/a+n/a
intronintron:Solyc02g014770.2.1.6SL2.50ch02:18371673..18371835n/a+n/a
intronintron:Solyc02g014770.2.1.7SL2.50ch02:18372007..18372086n/a+n/a
intronintron:Solyc02g014770.2.1.8SL2.50ch02:18372246..18372599n/a+n/a
intronintron:Solyc02g014770.2.1.9SL2.50ch02:18372675..18372761n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17713669%2Fdetails feature 17713669
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