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Solanum lycopersicum mRNA Solyc02g014310.2.1

mRNA details  
Name
Solyc02g014310.2.1
Type
mRNA
Length
2,300
Organism
Solanum lycopersicum
Description
Polyadenylate-binding protein (AHRD V1 *--- PABP_DROME); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
Location(s)
SL2.50ch02:15735648..15740449
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0003676
  • GO:0000166
Length
4802
Nb exon
16
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g014310.2.1 Polyadenylate-binding protein (AHRD V1 *--- PABP_DROME); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait

TAATTACTAACTTATGATATATTATTGTCGCCGTTGCACAAAAGGGCCTATTTTTACACTATAAAAACAAGCTCAAGAAGATATTTCCATTCATTCTCTTTCGTTAAACCCTAAAGTTTTCCCTTAGGGTTTTATAGCTGTCTACTCCTCCCAGCTGCTTTTTTTCCCCCACAACTTGTAATGGGTAAATCTATCAAGAAGTCCGCCACCAAGGCTGATGCTGCTGTAGTTGCTCCAACCAAATCCATGAAGAAAGGGAAGAGAGAAGCTGAGGATGAAATTGCCAAGTTGGTGAGTGCAAAGAAGCAGAAGAAAGATGTGGCTGTAGCACAAGCTGTTGAGAAAAAGAAAAGTGATCTCAAAACTCAGAAGAAGAAGAAGCCAGTAAGCAGTTCCTCTGACGATAGCTCCTCTGAGTCGGAGTCTGAGGACGACAAGCCACTGGTGCCTCCTAAGAAAGTGGCTCCTGCCAAAAAGGGAAAGGTAGCCAGCAGTTCTGATGACTCAGATTCTTCAGATGAGGATGAAGCTCCTGCTAAGAAAGTTGTTGTAGCTTCAACTAAGAATGGCGTTGCTGCTAAGAAGAAAGATGAGTCAAGTGATGATTCGGATGATAGCAGCTCTGAGGAAGATGTGCCTGCACCCAAGAAACCTCCTACTAATGGCGCTAAGAAAGACAAGTCAAGTGATGATTCTGATGATAGCAGCTCTGAGGATGATGCTGTTGTTAAGAAGGCACCTGCTGTTGTTAAGAAGGCGCCTGCTGCTGCCTCTAAAAAGCAAGAATCCAGCTCTGATTCCAGTGATGACTCCAGTTCAGATGATGATGATGAACCTCCCTCTAAGGTAGTTGCTCAACCTAAAAAGGCTCCTCAAGCTGTGAAGAAGACTGGTGACAGCTCTGATGACTCTGATGATTCTGAATCTGATTCTGATTCAGACAAGGGAAAGGCTGCTACTGTAGCTAAAAAGACTGCTGCTGTATCTAAAAAGGTTGCTTCATCTGATGATGACAGTGAGGATGATAGTTCCGAGGAGAGTGATGAAGAGCCTCAAAAGAAAAAGAGCAAGCCCTCGACCACACCAGCCGTCTCAAAAGCTCCAGAAAAGAGTAGCTCTGAGGAATCTTCTGACTCAGACGACTCCTCTGAAGATGAAGAGGATGACAAACCATCCAAAACTCCCAAGAAGGGTGCTGATGTAGAAATGGTTGATGCTCCTTCTGCTAAAGCTCAACAAACCCCTATTACTCCTAAAGCCCAAACCCCAGGGGGATCGAAAACATTGTTTGTTGGAAATCTATCCTATTCAGTGGAACAGGCGGATGTGGAGAATTTCTTCAAAGATGCTGGAGAAGTTCAGGAAGTGCGCTTTGCTACACATGAGGATGGTTCATTTAAGGGCTTTGGTCATGTTGAGTTTGTTACTGCTGAAGCTGCGCATAAGGCACTTGAACTTAATGGGCATGATCTTTTGGGCCGTGATGTGAGGTTGGACCTGGCTCGTGAGAGGGGAGAGTATACACCTCGCAGTGGGAATGAGAACTCATTCCAGAGGCCGGCTAGAAGTGAGGGAACAACAATTTTTGTCAGGGGCTTTGACAAAAATGAGGCTGAAGATCAGATTAGGAGTTCACTGGAGGAGCACTTTGCATCTTGTGGGAAGATCTTTAAAACAAGAATTCCTACAGACCCAGAAGGCTATATTAAAGGGATGGCTTATATTGAGTTTGCAAATGGAGATGCTGATGCTCTAAACAAAGCTCTGGAGCTTGATGGATCAGAAGTTGGAGGGTTTAGCTTGAATGTGCAAGAAGCAAAACCAAGGGGTGACAGTGCAGGTGGAGGAGGCAGAGGTTTTGGTGGTAGAAGTGGTGGTAGGGGTGGAGGTAGAGATAGTGGTGGTAGATTTGGTGGTCGTGGTGGTGGAGGCCGCTTTGGAGGTGGAGGCCGCTTTGGTGGCGGTGGACGCGGTGGAGGTGGTGGACGTTTTGGCGGTGGAGGCAGAGGACGAGGAAATGCCAACAAGCCAAGCTTCACTCCATCTGGTAAGAAGACTACCTTTAGTGACGAGTAACTTGGTCGCTATTGGCCAACTTATCTAAATCTCGTGGACGTTTTATCTTATTTTAAAAATATTATAAATTTTGTTAGCAAGAACTTTAGTAGTTAGTAGACAAATGGGATAATTTTGTTTCTTTTGAGTTCATGTACCATTCTTTGTGGGTGGAAAATGAGAGTTTGTTCAATGTTGATATCCAGTGTTTGTGGTATCTATCTCTTATATAATTGCTTCATATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g014310.2.1SL2.50ch02:15735871..15740269632-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g014310.2SL2.50ch02:15735648..157404494,802-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g014310.2.1.1SL2.50ch02:15740194..15740449256-2
exonexon:Solyc02g014310.2.1.10SL2.50ch02:15737837..1573793195-1
exonexon:Solyc02g014310.2.1.11SL2.50ch02:15737642..15737759118-n/a
exonexon:Solyc02g014310.2.1.12SL2.50ch02:15736914..1573700289-1
exonexon:Solyc02g014310.2.1.13SL2.50ch02:15736739..1573682688-n/a
exonexon:Solyc02g014310.2.1.14SL2.50ch02:15736555..1573664389-1
exonexon:Solyc02g014310.2.1.15SL2.50ch02:15736087..15736421335-2
exonexon:Solyc02g014310.2.1.16SL2.50ch02:15735648..15735900253-n/a
exonexon:Solyc02g014310.2.1.2SL2.50ch02:15739721..15739902182-n/a
exonexon:Solyc02g014310.2.1.3SL2.50ch02:15739528..1573961790-n/a
exonexon:Solyc02g014310.2.1.4SL2.50ch02:15739135..15739437303-n/a
exonexon:Solyc02g014310.2.1.5SL2.50ch02:15738882..15738995114-n/a
exonexon:Solyc02g014310.2.1.6SL2.50ch02:15738681..1573872848-n/a
exonexon:Solyc02g014310.2.1.7SL2.50ch02:15738490..1573856778-n/a
exonexon:Solyc02g014310.2.1.8SL2.50ch02:15738297..15738416120-n/a
exonexon:Solyc02g014310.2.1.9SL2.50ch02:15738030..1573807142-n/a
intronintron:Solyc02g014310.2.1.10SL2.50ch02:15737932..15738029n/a-n/a
intronintron:Solyc02g014310.2.1.11SL2.50ch02:15737760..15737836n/a-n/a
intronintron:Solyc02g014310.2.1.12SL2.50ch02:15737003..15737641n/a-n/a
intronintron:Solyc02g014310.2.1.13SL2.50ch02:15736827..15736913n/a-n/a
intronintron:Solyc02g014310.2.1.14SL2.50ch02:15736644..15736738n/a-n/a
intronintron:Solyc02g014310.2.1.15SL2.50ch02:15736422..15736554n/a-n/a
intronintron:Solyc02g014310.2.1.16SL2.50ch02:15735901..15736086n/a-n/a
intronintron:Solyc02g014310.2.1.2SL2.50ch02:15739903..15740193n/a-n/a
intronintron:Solyc02g014310.2.1.3SL2.50ch02:15739618..15739720n/a-n/a
intronintron:Solyc02g014310.2.1.4SL2.50ch02:15739438..15739527n/a-n/a
intronintron:Solyc02g014310.2.1.5SL2.50ch02:15738996..15739134n/a-n/a
intronintron:Solyc02g014310.2.1.6SL2.50ch02:15738729..15738881n/a-n/a
intronintron:Solyc02g014310.2.1.7SL2.50ch02:15738568..15738680n/a-n/a
intronintron:Solyc02g014310.2.1.8SL2.50ch02:15738417..15738489n/a-n/a
intronintron:Solyc02g014310.2.1.9SL2.50ch02:15738072..15738296n/a-n/a
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Related viewsNone found
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