Solanum lycopersicum mRNA Solyc01g112290.2.1

mRNA details  
Name
Solyc01g112290.2.1
Type
mRNA
Length
2,018
Organism
Solanum lycopersicum
Description
Glutamyl-tRNA synthetase (AHRD V1 ***- Q52JJ5_NICBE); contains Interpro domain(s) IPR004527 Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial
Location(s)
SL2.50ch01:98353467..98368740
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005737
Length
15274
Nb exon
13
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g112290.2.1 Glutamyl-tRNA synthetase (AHRD V1 ***- Q52JJ5_NICBE); contains Interpro domain(s) IPR004527 Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial

GTGCACAAGGATTCGTACTCCCAAGCGTCTCGAAAGCGTTATCCTGACATTGAATTGAAGATTGAATAGAAAGCTTGAAATCTGTCTTTTGGCGGCTGCGTCGAAGTTGAGCGAAGAATGGCGACGGTGGCGGCGGCGCCGTGGTTTAGAGCAAGGTTGATCCCGGAGTTAAAGAGTCGCCAGTCACTACTGTATTGTCGCAACGGCCCCCGCAGGTATCCGCAAAGTCTCTGTTTCCGGAGAAGAAGTTTCTCAATTTATGCTTCAGCAGGAGATGAAGGGGCTGTCCGAGTTCGTTTTGCACCGTCTCCTACCGGTAATCTCCATGTGGGAGGCGCTAGAACTGCACTCTTTAACTACTTATATGCGCGGTCGAAAGGTGGGAAATTTGTACTCCGGATTGAAGACACAGACCTGGAAAGATCCACAAGGGAGTCCGAGGAGGCCGTGCTTCGTGACCTTTCTTGGCTTGGTCTTGCTTGGGACGAAGGTCCTGGAATTGGTGGGAACTATGGCCCATACAGGCAGTCTGAGAGGAATGCCCTTTACAAGGAATTTGCTGAAAAACTTTTACAATCCGGTCATGTTTATCGATGTTTTTGCTCAAATGAGGAATTAGAAAAGATGAAAGAGATGGCAAAATTGAAGCAGTTGCCTCCCGTGTACACTGGGAGGTGGGCCAGTGCTACAGAGCAGGAAGTTCTAGAAGAGCTGACAAAGGGGACCCCATACACATATCGGTTTCGAGTACCAAAAGAAGGGAGTTTAAAAATTGATGACCTCATTCGTGGTGAAGTCAGTTGGAACTTCGACACTCTTGGAGACTTTGTGATCATGAGAAGTAATGGACAACCCGTTTACAATTTTTGTGTCACAGTTGATGATGCTACTATGGCTATCTCCCATGTCATAAGAGCGGAGGAACATTTGCCGAATACTCTAAGGCAAGCATTAATATACAAGGCACTAGGTTTTCCAATGCCTCACTTTGCGCATGTTTCTTTAATTCTTGCCCCTGATAGAAGCAAGCTCTCGAAACGGCATGGTGCAACTTCAGTTGGTCAGTTCAGGGACATGGGCTATTTGCCTCAGGCAATGGTGAACTATCTAGCTCTCTTGGGATGGGGCGATGGTACAGAAAATGAGTTTTTCTCCCTTGAGCAGCTTGTTGAAAAGTTCACAATTGAACGTGTAAACAAAAGTGGTGCCATATTTGATTCGACCAAGTTAAGGTGGATGAATGGTCAGCATTTGAGATCACTTCCATCTGAAGAGTTGAACCAAATCATTGGTGAAAGGTGGAAGGATGCAGACATCGTTACAGAATCACAAGGAGTTTTTGTACAGGATGCTGTTCTACTCCTCAAAGATGGGATTGACTTGATACCAGATTCAGAGAAAGCACTTTCAAGTTTGCTATCTTATCCTTTATATGAAACTTTGACAAGCACGGAAGGAAAACTGATCTTAGAAGATGGAGTCTCTGAAGTTGCTAAGAGCTTGTTAGCAGCCTACGACAGTGGTGAGCTCTGTGGTGCACTTGCAGAAGGCCAACCTGGATGGAGAAACTGGGTGAAGAAGTTCGGTAAATTGCTGAAGCGCAAGGGAAAATCTCTCTTCATGCCCCTTCGGGTGTTGCTAACAGGAAAGCTTCATGGACCTGATATTGGGGCCACCACAGTATTACTCTATAAAGCTGGAACATCTGGTTCTGTAGCACCCCAAGCTGGGTTTGTTACATTTGATGAAAGATTTAAGATATTGAGAGAAGTTCAATGGGAGTCGTTCAGCTCAAATGTGCCTTTGTCTGCTGGTGTTGTAACGCATTGAGATTGTGGCGATATTCTGTTTTGATTATCCATTATATGACTTCTATCTCCACCATTCCCAGTAGAAACAAAGAGAAGCTGCGAGCACAAGGGGGGTTTTCTTGTGTTTGCATCTCGTCTGGAATCAAAGAGGGCTACCATCTCTAGCGGGATTCCTTTTCTGTATCTTCCCCctccccctccccctcc
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g112290.2.1SL2.50ch01:98353583..98368552571+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g112290.2SL2.50ch01:98353467..9836874015,274+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g112290.2.1.1SL2.50ch01:98353467..98353837371+n/a
exonexon:Solyc01g112290.2.1.10SL2.50ch01:98364395..98364509115+2
exonexon:Solyc01g112290.2.1.11SL2.50ch01:98364739..98364839101+1
exonexon:Solyc01g112290.2.1.12SL2.50ch01:98368098..98368254157+n/a
exonexon:Solyc01g112290.2.1.13SL2.50ch01:98368328..98368740413+1
exonexon:Solyc01g112290.2.1.2SL2.50ch01:98353986..98354104119+n/a
exonexon:Solyc01g112290.2.1.3SL2.50ch01:98358813..98358934122+1
exonexon:Solyc01g112290.2.1.4SL2.50ch01:98359235..98359417183+2
exonexon:Solyc01g112290.2.1.5SL2.50ch01:98362365..98362483119+n/a
exonexon:Solyc01g112290.2.1.6SL2.50ch01:98363137..9836318549+n/a
exonexon:Solyc01g112290.2.1.7SL2.50ch01:98363347..98363448102+1
exonexon:Solyc01g112290.2.1.8SL2.50ch01:98363604..98363706103+n/a
exonexon:Solyc01g112290.2.1.9SL2.50ch01:98363811..9836387464+n/a
intronintron:Solyc01g112290.2.1.1SL2.50ch01:98353838..98353985n/a+n/a
intronintron:Solyc01g112290.2.1.10SL2.50ch01:98364510..98364738n/a+n/a
intronintron:Solyc01g112290.2.1.11SL2.50ch01:98364840..98368097n/a+n/a
intronintron:Solyc01g112290.2.1.12SL2.50ch01:98368255..98368327n/a+n/a
intronintron:Solyc01g112290.2.1.2SL2.50ch01:98354105..98358812n/a+n/a
intronintron:Solyc01g112290.2.1.3SL2.50ch01:98358935..98359234n/a+n/a
intronintron:Solyc01g112290.2.1.4SL2.50ch01:98359418..98362364n/a+n/a
intronintron:Solyc01g112290.2.1.5SL2.50ch01:98362484..98363136n/a+n/a
intronintron:Solyc01g112290.2.1.6SL2.50ch01:98363186..98363346n/a+n/a
intronintron:Solyc01g112290.2.1.7SL2.50ch01:98363449..98363603n/a+n/a
intronintron:Solyc01g112290.2.1.8SL2.50ch01:98363707..98363810n/a+n/a
intronintron:Solyc01g112290.2.1.9SL2.50ch01:98363875..98364394n/a+n/a
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