Solanum lycopersicum mRNA Solyc01g108490.2.1

mRNA details  
Name
Solyc01g108490.2.1
Type
mRNA
Length
1,776
Organism
Solanum lycopersicum
Description
Serine carboxypeptidase 1 (AHRD V1 **** B6SW38_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
Location(s)
SL2.50ch01:95797395..95802910
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006508
Length
5516
Nb exon
9
Sifter term
  • GO:0042802
  • GO:0004185
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g108490.2.1 Serine carboxypeptidase 1 (AHRD V1 **** B6SW38_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase

CTAAAACACAAAAATAATGGAGAAGCAACACATGAAATACACGTTCCTCCTCACAAAATTGAACTTCTTTTTTCTTGTAACATTAATTTTTCATGTTCTAATTGTCCATGGCTTCCAAATTGATACTCAGGCACGTAGATTAATGTCGTGGCGTCGTTCGAAAATACGTTCTCGGTGGATTAATTCTTATCAGGATGAAACATGGTCGACTGAAAAAATTGTATTTGATTCTGATGATGATGAAGAAGAATTACATGTTGGAAATATGGAGGATGATTTGATAAAATATGGTCTTCCAGGACAACCAAAATTAAATGTGAAGTTTAATCAGTATGCAGGTTATGTTAATGTTGATGAAAAGAATGGAAGAAGTCTTTTTTATTACTTTGCTGAATCTGCTTCTGGAAATGCTTCTTCTAAACCACTTGTTCTTTGGCTAAATGGAGGTCCAGGATGTTCATCATTAGGTTTTGGGGCCATGCTAGAGCTTGGCCCTTTTGGTGTAAAACCTGATGGTAAAACCCTTTATTCCAGAACATTTGCTTGGAACAAAGTTGCAAATGTGATGTTCCTAGAGTCACCAGCAGGGGTTGGCTTCTCCTATTCCAATACTAGCTCAGATTATGCACAATCAGGCGACAAGAGGACTGCTCAAGATGCATATAGGTTTCTAGTGAATTGGTTCAAGAGGTTTCCACATTACAAAAGCAGGGATTTTTACATCATGGGAGAAAGTTATGCAGGATTCTATGTGCCAGAGCTAGCAGACATCATTGTCAAGAGCAACATGCTAGCAACCACAAACTCCAAGATCCAATTCAAAGGAATCATGATAGGAAATGGTATAATGAACGATGTCACAGATGAGAAAGGGCAATTAGATTATTTATGGAGTCATGCACTAATCTCTGATGAGACTCATTTAGGCATCCAACAACATTGCAAAACCCAAACTGATGAGACAAAAATATGTGAACAATTTCAAAGCACAGCTCAAACTGAGTTTGGAAACATAGATCCTTACAACATCTATGGTCCAATTTGTCCCCTTGATGACGACGATTCATCATCATCATCATCGTCATCAAGAAGAAGAATATTCAAGAAAAATGGATATGATCCTTGTGAACAACATTATGTTCGCCATTATCTCAATCTTCCTCAAGTTCAAAAGTCTTTGCATGCCAACCTTCCTAACCGTTGGGAATCTTGCAGTGATCTGACATGGAAGGATAGTCCATCAAGTATGTTTCCAATATACAATAGACTAATTTCATCTGGTCTCAGGATACTTCTTTTCAGTGGAGATGTAGATGCAGTAGTTTCAGTAACTTCAACTCGTTATAGCATTAGTGCAATGAACCTTACAGTCATCAAACCTTGGCATGTTTGGCATGATGATACAAAAGAAGTAGCTGGATATATGGTGGTGTATGATGGATTAGCTTTTGCAACAGTTAGGGGAGCAGGGCATCAAGTTCCACAATTTCAACCACGTAGAGCTTTTGCTTTGTTGAATATGTTCTTTGCCAATCACTTTTAGCATTTGGGGATTGGGCTTATTGCAAACTCCATTTCAAACTCATTTTAATAATAATTGGACATATTTAATTGATCAAAGTATTATTTCATGATCCAGTTTTATTTTATCACAGAGTCAGAGAAAAATTAGTCGTTGGACCTAATTCAGCTCCAAAAACTAACAAATACTAATCTAAAATACGAATTTATCTCATCCCATCGGTATGTGACTCAACAACAACTTTGACCAAACCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g108490.2.1SL2.50ch01:95797627..95802894509-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g108490.2SL2.50ch01:95797395..958029105,516-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g108490.2.1.1SL2.50ch01:95802465..95802910446-2
exonexon:Solyc01g108490.2.1.2SL2.50ch01:95801079..95801186108-2
exonexon:Solyc01g108490.2.1.3SL2.50ch01:95800667..9580076296-2
exonexon:Solyc01g108490.2.1.4SL2.50ch01:95800438..9580053093-2
exonexon:Solyc01g108490.2.1.5SL2.50ch01:95799612..9579970089-n/a
exonexon:Solyc01g108490.2.1.6SL2.50ch01:95798578..95798960383-1
exonexon:Solyc01g108490.2.1.7SL2.50ch01:95798170..9579825687-1
exonexon:Solyc01g108490.2.1.8SL2.50ch01:95797962..95798070109-n/a
exonexon:Solyc01g108490.2.1.9SL2.50ch01:95797395..95797759365-n/a
intronintron:Solyc01g108490.2.1.2SL2.50ch01:95801187..95802464n/a-n/a
intronintron:Solyc01g108490.2.1.3SL2.50ch01:95800763..95801078n/a-n/a
intronintron:Solyc01g108490.2.1.4SL2.50ch01:95800531..95800666n/a-n/a
intronintron:Solyc01g108490.2.1.5SL2.50ch01:95799701..95800437n/a-n/a
intronintron:Solyc01g108490.2.1.6SL2.50ch01:95798961..95799611n/a-n/a
intronintron:Solyc01g108490.2.1.7SL2.50ch01:95798257..95798577n/a-n/a
intronintron:Solyc01g108490.2.1.8SL2.50ch01:95798071..95798169n/a-n/a
intronintron:Solyc01g108490.2.1.9SL2.50ch01:95797760..95797961n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17707999%2Fdetails feature 17707999
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)