Solanum lycopersicum mRNA Solyc01g107760.2.1

mRNA details  
Name
Solyc01g107760.2.1
Type
mRNA
Length
1,667
Organism
Solanum lycopersicum
Description
Cathepsin B-like cysteine proteinase (AHRD V1 **-* CYSP_SCHMA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain
Location(s)
SL2.50ch01:95198657..95201134
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0008234
Length
2478
Nb exon
5
Sifter term
GO:0004197
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g107760.2.1 Cathepsin B-like cysteine proteinase (AHRD V1 **-* CYSP_SCHMA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain

CTCCAATAACCCAAACAACAAACAAGAAGAAGAACAAAAAAAAAGATGACTTATTTCAGGCCTTTGTTCTTGTTTCTTCTTACATTTTTTGTCCTTTCATCTGCTCTTGACATGTCCATCATCAGTTACGATGAAAAGCATGCAGATTTAGGGGCAACAAATCATCGTACAGACGATGAAGTTAAGGGATTGTATGAATCTTGGATTGTTAAGCATGGAAAGAATTACAATGCCATAGGAGAAAAGGAAAAAAGATTTGAAATTTTTAAAGATAATTTAAGATTCATCGACGAGCAAAACGCTGAGACCAGACCGTATAAACTTGGGTTGAATCGATTTTCTGATCTTACCAACGATGAGTACCGTGCCCTGTTTGTAGGTGGACGGTTCGATAAAAAGACGAGGCTTTTGAAGAACCCTAAAAGCGAACGTTACGCTTTTAAGGCCGGCGAAAAGTTGCCGGAATCCGTTGATTGGAGACAGAAAGGCGCTGTTGCCCCTGTTAAAGACCAAGGCCAATGTGGGAGTTGCTGGGCATTCTCTACGGTTGGTGCTGTTGAAGGAATAAATCAAATTGTAACCGGTGAATTAATTTCCCTCTCTGAACAAGAGCTTGTTGATTGTGACAAGAGCTATAACCAGGGTTGTAATGGCGGTCTCATGGACTACGCCTTCGAATTCATTAAAAACAATGGCGGCATTGACACTGAGGCTGACTACCCTTACCGTGCTAAAGATGGTACTTGTGATTCAAACAGGAAAAATGCTCGGGTTGTCTCCATCGACGGATATGAAGATGTTCCCATAAATGATGAGAAATCATTGATGAAGGCATTGTCAAATCAACCAGTTAGTGTTGCTATTGAAGCTGGTGGCAGAGCTTTCCAGCACTACTCTTCGGGTGTTTTCACTGGATACTGCGGTACACAACTAGACCATGGTGTAGTTGCAATTGGCTATGGAACAGATAATGGTTCAGATTACTGGATTGTGAGGAATTCATGGGGTCCTAACTGGGGAGAAAGTGGATACATTAGGCTCGAGCGAAATTTAGCTAATAGCACTAGTGGAAAGTGTGGAATTGCAATGGAGCCCTCTTACCCTCTTAAGAATGGGGCAAATCCTCCTAATCCCGGTCCATCTCCTCCTAGTCCTGTAGCACCATCAACCGTTTGCGATGAGTACTATAGCTGCACCGCGGGCACTACTTGCTGCTGCATTTATAAGTATGGCGACTACTGTTTTGGCTGGGGATGTTGTCCTTATGAGTCTGCTACCTGCTGTGATGACAACAACAGCTGCTGTCCACATGATTATCCTGTCTGTGATGTTAATTCAGGCACTTGTCAAATGAGCAAGGATAGTCCATTGAGTGTAAAAGCATTGAAGAGAGGTCCTGCTACTGCTAGAGTAAACTGGTCAGGGATGAAATCTAACAGGAAAGTGAGTTATGATTGAGTAATTTAGCAACTGCAGGTGAAAAGGGCAAAAGGATCATCATGTTTAGAAGAGCTGTTCAATCTGTGGCCAATGGGCTGTTTCTGTTGTTGATTGGTTTAGTTAGTATTGTTCCTTTTTTTATTATTTGAGACAACTTTTACCCAGTGTAAATATTCATCTTTTAAATTCTTAATGAAAATTCTAAGTACCATAATGTTCTATTGCAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g107760.2.1SL2.50ch01:95198865..95201089471-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g107760.2SL2.50ch01:95198657..952011342,478-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g107760.2.1.1SL2.50ch01:95200612..95201134523-2
exonexon:Solyc01g107760.2.1.2SL2.50ch01:95200139..95200374236-n/a
exonexon:Solyc01g107760.2.1.3SL2.50ch01:95199894..95200034141-n/a
exonexon:Solyc01g107760.2.1.4SL2.50ch01:95199257..95199709453-n/a
exonexon:Solyc01g107760.2.1.5SL2.50ch01:95198657..95198970314-n/a
intronintron:Solyc01g107760.2.1.2SL2.50ch01:95200375..95200611n/a-n/a
intronintron:Solyc01g107760.2.1.3SL2.50ch01:95200035..95200138n/a-n/a
intronintron:Solyc01g107760.2.1.4SL2.50ch01:95199710..95199893n/a-n/a
intronintron:Solyc01g107760.2.1.5SL2.50ch01:95198971..95199256n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17707205%2Fdetails feature 17707205
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)