Solanum lycopersicum mRNA Solyc01g105800.2.1

mRNA details  
Name
Solyc01g105800.2.1
Type
mRNA
Length
1,151
Organism
Solanum lycopersicum
Description
MADS box transcription factor (AHRD V1 **-- Q2NNB9_ELAGV); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box
Location(s)
SL2.50ch01:93839471..93848297
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
8827
Nb exon
10
Sifter term
GO:0046982
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g105800.2.1 MADS box transcription factor (AHRD V1 **-- Q2NNB9_ELAGV); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box

ATGGAACAAATAACTATTCAATTAAAAAGCTCCAACTCAAACTCGCATGAAGAAATACAATTACTCCTTTGTAACCAAAAATACCCTAATTACTACTTTTTCTCTTTCTATTGTAATAACATACCTTTTTTTTCTTTCTTCAGCTCACAACTTCAGATCTCTTCTCCATTTCTTGCAAATTTCAGTAAGGAAATGGTGAGACAAAAAATTCAGATCAAGAAGATAGACAATTTGACAGCAAGACAAGTGACATTTTCAAAGAGAAGAAGAGGGCTTTTCAAAAAAGCTCAAGAGCTTTCAACTCTTTGTGATGCTGATATTGGACTCATTGTTTTCTCTGCTACTGGAAAACTTTTTGAGTATTCAAGCTCCAGCATGATGCAACTGATTGAGAAGCACAAGATGCAGTCAGAAAGGGATGGTATGGATAATCCAGAACAACTGCATTCTTCTAACATTCTGAGCGAGAAGAAAACCCATGCAATGCTTAACAGGGACTTTGTGGAGAAGAATCGGGAGTTAAGGCAACTACATGGAGAAGAGCTGCAAGGACTTGGTTTGGATGAATTAATGAAATTGGAGAAATTAGTCGAGGGAGGAATAAGTCGTGTCCTCAAAATTAAGGGTGACAAGTTTATGAAAGAGATCAGTTCCCTCAAGAAAAAGGAAGCTAAACTCCAGGAAGAGAATTCACAGTTGAAAAAGCAATCACAAGCAAGATTGAATGAAGAAGGGCAAAATGTAATTGAGCAAGGACATTCAGCAGACTCCATCACGAACAATCGCAGCTTAGTCAATGACTCAGATACTAGTCTCAAGTTATGCTTGGCTTTTCCTTAGTGAGCTCCATCCATATGAAAATGGGAGATAATATAGTTACTCAAACAAGGGCGAGTAATTTTCTAATATTTATTATGGATCATAATATAGTGAAATGTATAAAATTGATTAGATTGGTTGATCAGGCTCCGTTAAAAAAACATTGGGACCATAGAGTTCATTGAGAATCAAAGGGTCAACAGTCTAATCAGAGAGTCATGTGATATTTAGCTAGGTGCTATGTATTAATCTATTTAAAGAATCAACTTAAATATATGTATTTATTAGCAGTAATTTCTTTGATTATTCAAGAAGCACCAAACTTTAATTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g105800.2.1SL2.50ch01:93839470..93847986280+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g105800.2SL2.50ch01:93839471..938482978,827+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g105800.2.1.1SL2.50ch01:93839471..9383952555+n/a
exonexon:Solyc01g105800.2.1.10SL2.50ch01:93847971..93848297327+1
exonexon:Solyc01g105800.2.1.2SL2.50ch01:93840283..93840412130+2
exonexon:Solyc01g105800.2.1.3SL2.50ch01:93840773..93840961189+1
exonexon:Solyc01g105800.2.1.4SL2.50ch01:93844791..9384487888+1
exonexon:Solyc01g105800.2.1.5SL2.50ch01:93845637..9384569862+n/a
exonexon:Solyc01g105800.2.1.6SL2.50ch01:93846211..93846310100+1
exonexon:Solyc01g105800.2.1.7SL2.50ch01:93846926..9384696742+n/a
exonexon:Solyc01g105800.2.1.8SL2.50ch01:93847645..9384769248+n/a
exonexon:Solyc01g105800.2.1.9SL2.50ch01:93847775..93847884110+n/a
intronintron:Solyc01g105800.2.1.1SL2.50ch01:93839526..93840282n/a+n/a
intronintron:Solyc01g105800.2.1.2SL2.50ch01:93840413..93840772n/a+n/a
intronintron:Solyc01g105800.2.1.3SL2.50ch01:93840962..93844790n/a+n/a
intronintron:Solyc01g105800.2.1.4SL2.50ch01:93844879..93845636n/a+n/a
intronintron:Solyc01g105800.2.1.5SL2.50ch01:93845699..93846210n/a+n/a
intronintron:Solyc01g105800.2.1.6SL2.50ch01:93846311..93846925n/a+n/a
intronintron:Solyc01g105800.2.1.7SL2.50ch01:93846968..93847644n/a+n/a
intronintron:Solyc01g105800.2.1.8SL2.50ch01:93847693..93847774n/a+n/a
intronintron:Solyc01g105800.2.1.9SL2.50ch01:93847885..93847970n/a+n/a
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Related viewsNone found
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