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Solanum lycopersicum mRNA Solyc01g103960.2.1

mRNA details  
Name
Solyc01g103960.2.1
Type
mRNA
Length
3,852
Organism
Solanum lycopersicum
Description
ATP-dependent DNA helicase Q1 (AHRD V1 *-** C1GRE2_PARBA); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type
Location(s)
SL2.50ch01:92436883..92448578
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0044237
  • GO:0006310
  • GO:0008026
  • GO:0005524
  • GO:0006281
  • GO:0005622
Length
11696
Nb exon
24
Sifter term
GO:0043138
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g103960.2.1 ATP-dependent DNA helicase Q1 (AHRD V1 *-** C1GRE2_PARBA); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type

ATGTCTAAAGATAAGCTTCCAAAAGCCAACTGGACGCAACATGCTATTGCCCATGATAATTTTTCATGCCAAGATAAGTTCTTGAGTTCGAACATCCTTTTCTCTCTACCCACACAAAGACATTGTGCCAGAGATGAAATGAATGCCAGGTCAGTGACTTGTCATATCAGAAGTGTATCAAAATTGGAAGCTGAAAAGGCTTGGAAGCTTCTAACCAGCCTCAAGTTGTCTCCCAAGAGTTACACAAGACCAGGGAAAACTCCACAACTAACCAAAGATACCAATGCTTTCTCACAACACTCTAATCACACACAGTTCCCGCGTGCATCTGATGGAAACTGTGCTCCAGCGAGGTGCAGGCCAGTGCATCAAGGTGTTGGTGACGATGGTGAAAACAGTGACTCGAGAAGGTATGCAGGCAATTGTTTTCCACCACACTCAAGCGGTGTAGCAGAAACAGGGAACGTTGTGAACAGGCAGAGTGGAGTAGACAATTCACATGCTCGAGGTGTAGGGGAAATATCCAGCAGTCATGCAAATGGTGCAAGCAAGAAGACACGGGAGGTGTATACAACTTGTGCTGATGAAACTGAAGAAGATGACATTCTTCTGAATATAGATGTCGACCAAATAGTAGAACACTATCAGACCAACTGCACGCCACAGCCTTCTGTCTCCAGGTTCCCGTCAACTACTCCAGTTACAAAGTCTCAAAGTTTGGCTGGACACGAGGAGACAAATTTGCCACCAGAGTTGTCCATAAACTGCAACCACGGTTTGCAGCTAGGACTTTGCCCTGGAGCCCTGGATCATTTACAAGAGATGAAGGATAAGCTAATTGAGATTTCAAATGATCTTCTTGACAATGTTTCAGACCTGAGTTCAGAACAGATTGAAATGCTTCGCCAAGAGCGGTCACAGCTGAAGCTGCAAATTCAGCACCTCGAAAAATTTCTTCAAACTGTATCAGGCAACGAAGAAAGAAAGATGTCACAGTGTTCCGCTTCCACACTAACTTCTGCCTTTCAGTATGAAACACCTTCTGCCTTTCAGTATGCCACACCTTCTTCATTCCCTTCAAGGATTAATCCTACAAGACTCGACACACAGTTTAGTGGATACAATGAGTCCAGTCACTTTGACAACTGGAATTCATCATCACTTTCATTTGACGTGACTGGTGGAAATGGTCTTTCAACAGCCCCAGTGGAAAGAGAACCATACATCCCAAAGTATCTTGAAGTTAACTATATTGATGGTTCAAATGACAAGAAGTGGAGTTGCCGAGATTTCCCTTGGACAAAGAAGCTTGAGGCCAATAACAAAAAAGTATTTGGAAATCACTCTTTTCGTCCTAATCAACGAGAGGTGATAAATGCAACAATGAGCGGAAATGATGTGTTTGTTTTAATGCCAACAGGAGGAGGCAAAAGTCTGACATATCAGCTTCCTGGTCTTATTTGTCCTGGAATTACTTTGGTCATTTCACCTCTTGTTTCGCTCATCCAAGATCAGATAATGCATTTGCTGCAGGTTAACATACCTGCTGCTTATCTTAGTTCCAACATGGAGTGGACTGAGCAACAGGAGATACTTAGAGAGCTCAATTCAGATGGTTGCAAATACAAATTTTTATATGTTACCCCAGAGAAAGTTGCCAAAAGTGATGTTCTATTGAGACACTTGGAAAGTCTACATACTCGTGATACACTTGCAAGAATTGTTATTGATGAAGCACATTGCGTAAGCCAGTGGGGACATGATTTCAGGCCTGATTATCAGTGTTTAGGTATCCTGAAGCAAAAGTTCCCAACTGTGCCTGTTCTGGCCTTGACTGCTACTGCTACAATAAGTGTCAAGGAGGATGTTGTTCAGGCTCTTGGTCTTGCCAACTGCATTATTTTCCGACAAAGCTTCAATCGCCCAAATTTAAGATATACTGTTATCCCAAAGACAAAGAAGTGTTTGGAAGACATTGGCACTTTTATAAAGAATAATCATTTTGATCAATGCGGGATAATTTATTGTCTTTCTAGAATGGATTGTGAGAGAGTAGCAGAAAAGCTGCAGGAATACGGACATAAAGCAGCATTTTATCATGGCAGCATGGATGGTGCTCAACGAGCTAACATCCAGAAGCAGTGGAGCAAAGATGAGATCAATATTATATGTGCAACTATTGCGTTTGGAATGGGTATCAACAAGCCAAATGTTCGTTTTGTTATTCATCATTCTTTGCCAAAATCTATTGAAGGGTACCATCAGGAGTGTGGTCGTGCTGGTAGAGATGGTCTACCTTCCTCTTGTGTTCTGTACTACAGTTATAGTGATTATATACGAGTCAAGCATATGATCAGTCAAGGCACTGTAGAGCAGAGTCCCTTTGGGTCTGGATATGGTCGTTCAAATGTGGCAGCTTCAGGGAGGAACCTTGAGACGAACGTGGAAAATCTTCTAAGAATGGTTAGTTACTGTGAGAATGAAGTTGATTGTCGTCGTCTCCTTCAGCTTATTCACTTTGGCGAGAAATTCGAATCTACCAACTGCCGAAAAACATGTGATAATTGCTGCAAGACTCAGAACTGTATTGAGAAAGACGTCACTGAAGTTGCAAAGCAATTAGTTGAATTGGTGAAGACGACGGGACAAAAATTCTCGTCAGCCCATGTTTTGGAAGTCTTCAGGGGCTCCTTGAGCCAATATGTGAAGAAACACAGACACGAGTCCTTGCATCTGCATGGAGCTGGAAAGAAGCTAGCCAAGGGTGAAGCATCCCGCGTGCTACGTCATCTTGTTACTGAAGATATTCTTGTGGAGGATGTTAAAAAGAGTGACCTTTATGGATCCGTTTCATCAGTCCTAAAGGTGAATGAATCAAAGGCCTATAATCTATTTGCTGGTGGTCAGACGTTGAGATTAAGGTTCCCTTCATTTGTGAAGGCATCTAAACTGGGTAAATATGAAGCCACTCCAGCAAAAGGTTCACTAACATCAGGAAAGCAGAGTCCTCCAAGGACAGACCCTTCTGGTGTACCTCAATCTACATTTGATCCATCCCTTTCAGCGATACTATATTCAGCTCTACGGAAACTTCGTACTAATATTGTTAGGGAATCTGGAGATGGTGTCATGGCTCACCATATATTTGGAGATGACACCCTGCAGCTGATTGGCCAGAAAGTACCTAGAACTAAAAATGAGCTACTTGACATCAATGGAATTGGCAAGGTAAAAATCAACAAGTACGGGGATAATGTGCTGCAAACCATTGAAGCTACGGTCAGGGATTACTATAAGTCAGATAAGACGAGTAGCAGTGGCAATGACAATACTGATTCAGGTAAAAAGAGGAGAAATTCCATCAATGTACAAAACGGGAACTCCAAAGATGAAGAATTCTTCACTGAAAGCACTGGATGTACTAAGAAAAGGGTGTTAAAGAAGCAGAACAAACATGCTGAGGTTATTGATTATAGGGACCTTGGGTATTTTGATGAATGTATAGACGGTGACCTTGATTTCGATGAGACTATGATGCCTTAGTGAATGCTTCCTATTTCAAAAGTTGATCAGAATGAAAGAAGCTTTTTATGATCAACATCCCAGGTTGTATGGTTCGAAGTTAGCATCGCAGTTTGCATGGGTGAAAAGTTTATGATCATCACACTGTTCTTATTAATTTGGGTGAAATGTAAATCTGTTAACAGAACTGCTGGAACAAGGCTCAAGTTCCAGCTACTATGAGATGCTAACTTAATCTTGATAGGACTCATCTTAGTGCATATAATAATTCTCTTTTCTATATTTTAGTTGATTGCTAAATTTTCTATTGGATTCATTAGGACTTTCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g103960.2.1SL2.50ch01:92436882..924482691,181+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g103960.2SL2.50ch01:92436883..9244857811,696+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g103960.2.1.1SL2.50ch01:92436883..92437031149+n/a
exonexon:Solyc01g103960.2.1.10SL2.50ch01:92442314..92442434121+1
exonexon:Solyc01g103960.2.1.11SL2.50ch01:92442520..92442671152+n/a
exonexon:Solyc01g103960.2.1.12SL2.50ch01:92442759..92442894136+1
exonexon:Solyc01g103960.2.1.13SL2.50ch01:92443463..92443586124+n/a
exonexon:Solyc01g103960.2.1.14SL2.50ch01:92443661..9244373171+2
exonexon:Solyc01g103960.2.1.15SL2.50ch01:92443845..9244391369+n/a
exonexon:Solyc01g103960.2.1.16SL2.50ch01:92444035..92444163129+n/a
exonexon:Solyc01g103960.2.1.17SL2.50ch01:92444243..92444401159+n/a
exonexon:Solyc01g103960.2.1.18SL2.50ch01:92444517..9244459781+n/a
exonexon:Solyc01g103960.2.1.19SL2.50ch01:92444674..92444835162+n/a
exonexon:Solyc01g103960.2.1.2SL2.50ch01:92437578..9243762649+1
exonexon:Solyc01g103960.2.1.20SL2.50ch01:92444984..9244503956+n/a
exonexon:Solyc01g103960.2.1.21SL2.50ch01:92446461..92446593133+1
exonexon:Solyc01g103960.2.1.22SL2.50ch01:92446695..9244678995+n/a
exonexon:Solyc01g103960.2.1.23SL2.50ch01:92447800..9244787778+1
exonexon:Solyc01g103960.2.1.24SL2.50ch01:92447954..92448578625+1
exonexon:Solyc01g103960.2.1.3SL2.50ch01:92437897..92438310414+n/a
exonexon:Solyc01g103960.2.1.4SL2.50ch01:92438712..92438882171+n/a
exonexon:Solyc01g103960.2.1.5SL2.50ch01:92438972..92439102131+n/a
exonexon:Solyc01g103960.2.1.6SL2.50ch01:92439254..92439653400+1
exonexon:Solyc01g103960.2.1.7SL2.50ch01:92439724..92439855132+n/a
exonexon:Solyc01g103960.2.1.8SL2.50ch01:92441274..9244136087+n/a
exonexon:Solyc01g103960.2.1.9SL2.50ch01:92441449..92441576128+n/a
intronintron:Solyc01g103960.2.1.1SL2.50ch01:92437032..92437577n/a+n/a
intronintron:Solyc01g103960.2.1.10SL2.50ch01:92442435..92442519n/a+n/a
intronintron:Solyc01g103960.2.1.11SL2.50ch01:92442672..92442758n/a+n/a
intronintron:Solyc01g103960.2.1.12SL2.50ch01:92442895..92443462n/a+n/a
intronintron:Solyc01g103960.2.1.13SL2.50ch01:92443587..92443660n/a+n/a
intronintron:Solyc01g103960.2.1.14SL2.50ch01:92443732..92443844n/a+n/a
intronintron:Solyc01g103960.2.1.15SL2.50ch01:92443914..92444034n/a+n/a
intronintron:Solyc01g103960.2.1.16SL2.50ch01:92444164..92444242n/a+n/a
intronintron:Solyc01g103960.2.1.17SL2.50ch01:92444402..92444516n/a+n/a
intronintron:Solyc01g103960.2.1.18SL2.50ch01:92444598..92444673n/a+n/a
intronintron:Solyc01g103960.2.1.19SL2.50ch01:92444836..92444983n/a+n/a
intronintron:Solyc01g103960.2.1.2SL2.50ch01:92437627..92437896n/a+n/a
intronintron:Solyc01g103960.2.1.20SL2.50ch01:92445040..92446460n/a+n/a
intronintron:Solyc01g103960.2.1.21SL2.50ch01:92446594..92446694n/a+n/a
intronintron:Solyc01g103960.2.1.22SL2.50ch01:92446790..92447799n/a+n/a
intronintron:Solyc01g103960.2.1.23SL2.50ch01:92447878..92447953n/a+n/a
intronintron:Solyc01g103960.2.1.3SL2.50ch01:92438311..92438711n/a+n/a
intronintron:Solyc01g103960.2.1.4SL2.50ch01:92438883..92438971n/a+n/a
intronintron:Solyc01g103960.2.1.5SL2.50ch01:92439103..92439253n/a+n/a
intronintron:Solyc01g103960.2.1.6SL2.50ch01:92439654..92439723n/a+n/a
intronintron:Solyc01g103960.2.1.7SL2.50ch01:92439856..92441273n/a+n/a
intronintron:Solyc01g103960.2.1.8SL2.50ch01:92441361..92441448n/a+n/a
intronintron:Solyc01g103960.2.1.9SL2.50ch01:92441577..92442313n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17702680%2Fdetails feature 17702680
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