Solanum lycopersicum mRNA Solyc01g100280.2.1

mRNA details  
Name
Solyc01g100280.2.1
Type
mRNA
Length
2,336
Organism
Solanum lycopersicum
Description
ATP-DEPENDENT DNA HELICASE (AHRD V1 *-** Q8SRI7_ENCCU); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type
Location(s)
SL2.50ch01:90352624..90358296
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006310
  • GO:0008026
  • GO:0005524
Length
5673
Nb exon
10
Sifter term
GO:0004003
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g100280.2.1 ATP-DEPENDENT DNA HELICASE (AHRD V1 *-** Q8SRI7_ENCCU); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type

ATGGACTTCAAAGGCCTTGGCTTGGGTCATAGTATCACAGATGCTCCAAGCCCAACACAAGAACGCCGTCGTTTAAGTAAAACTAGTGGGATAAAACTTCGAAATACAATTTTCGTAGTACGAAAAGAAGTTCTAAAATTGATTCTGAAAAGCCAAATGAAAGCGCGGGAAAAGCAACGACGGCCACCGCTGCGACGGCCGCGAAAGGCGGAGATTGAAGACGCTGAAGAAATGCAGGACGAAGATCTCGAGTTAGAGAAAGTTAGACTGATAAGCTTAGCCCTTGAATGCGGATTTGATGAAGACTCCGCAAAGACGTGCCTGAATCGCCTCGTTGAGCTCTACGGTGATGATGGGCGAGATTTCATCAATGTGGAGCTCTGTGGAGATGAATTTCTGGCGTTGCTGGCTGAATCTATGCAAGACACTGAGGATTGGGATGATTTGCAAGCAATTGAATCAGAGGCTTGTGGAGCTCTAGCTGATATGTTGGGTAAGGATACTCGTGAGGACTGTGAAGTTGATTGTGATGAGGATTCTGGCGCCTATGTCCATGTTATTGAGGATTCACCCCAACAGCAAAGGCATGCAAAAACAGTGCTGTTGGATTCTTCAAGTGAAAGCGAAGAGATGGGTATTAGATTTGCAAGCAAAGAGGATCTCCCCTCTACCTCTAAGATTCGCCGTGATAGAATTCACCAGGGCATGACTCCACAATCAGGGTGCCGTGCCTCAACGTTGATGGATTATATGAGCGTGTTTACTGAAGGTTCATATTCATCAGTCTCCCCTGAAATGGAGTGCCCCTTGGAATCAAGTCACGGAGACAGAACCCTTAGTTATGAAGAGTTGCAAAGGTTGGATGATATTGAACTGGCAAATGTGGTAGTATTCGGAAACAGGTCCTTTAGACCTTTACAACATCAAGCTTGTCAAGCATTTCTTCAAAAACGTGATTGCTTTGTTCTAATGCCAACTGGAGGTGGTAAAAGTCTTTGCTACCAGCTTTCAGCGATTGTTCAACCTGGTGTTATGATTGTAATATCCCCCCTACTTTCACTAATTCAGGATCAGATAATTACCCTTAACCTCAAGTTCGGGATACCTGCAACCTTTTTAAATTCCCAACAAACTCAATCACAGACTGCAGCTGTACTACGAGAATTAAGGAAAGATGTACCATCCTGCAAGCTCCTCTATGTAACTCCTGAGAGGATAGCTGGAAATTTATCATTTCAAGAAACCTTAGAATGCATGCATAGAAAGGGACAATTGGCTGGTTTTGTTATTGATGAGGCTCACTGTGTGAGCCAGTGGGGACATGATTTTCGACCAGATTATAGAGTATTAGGATGTCTTAAGCAAAATTTTCCAGTTGTTCCAGTGATGGCATTAACTGCCACAGCAACCCACGCAGTCCGTCAAGATATCTTGAGTGCTTTAAGAATTCCTCGTGCCCTTGTCCTTGAGACTAGTTTTGATAGATCCAATTTAAAGTATGAAGTTACTGGAAAGAGCAAAGAGCCACTTAAGCAACTTGGGAATCTAGTACGGGATCGATTCAAGAATCTATCGGGAATTGTGTACTGCCTATCAAAAAGTGAGTGTGTGGATGTTTCAAAATTTTTGAATGAGAAATGCAAAATCAAAACAGCATACTATCATGCTGGTTTAGCATCTCGTCAGAGGGTTGCAGTTCAGAAGAGGTGGCGCTCTGGAGAGGTTGATATCGTCTGTGCAACTATTGCTTTTGGAATGGGAATTGACAAACCTGATGTTCGGTTCGTTGTTCATAATACAATGTCCAAATCTATTGAAAGTTATTATCAGGAAGCTGGAAGGGCAGGAAGAGATGGCCTTCCTGCTACATGTGTCATATTATACCAAAAGAAGGATTTCAGTCGAGTTGTATGCATGCTAAGAAGTGGGCAGGGCTATAAAAAGGAAAGCTTGAAGAGGGCCATGGAACAAGCTCGAAAAATGCAGAAATACTGTGAACTTAAGAATGAATGTCGTAGAAAATTGTTACTTGAACACTTCGGAGAGTCCTTTGACCAATATTCTTGCAAGAATGGTTCTAATCCATGTGACAACTGTCTCAAGTCTTCCTCGTGAAGGGTCTACATTTTAAACCCAAGAGAAGGCGACATTACAAATATCAATTTAAGCTTGGGTAATGTCATTTGAGCAGCTATGTCATGCATGGTTCAGTTTTGATAAAGTAAATTTGACATGTTTTATTATTGACTATTGTAATCAGTAATATGGTCATCTCATACAACAAGATGCTCATTTTCAAGAGGCAAAAGATGCATCTTGGAGTAGTAAGTGCATGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g100280.2.1SL2.50ch01:90352623..90358075705+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g100280.2SL2.50ch01:90352624..903582965,673+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g100280.2.1.1SL2.50ch01:90352624..90352969346+n/a
exonexon:Solyc01g100280.2.1.10SL2.50ch01:90357965..90358296332+n/a
exonexon:Solyc01g100280.2.1.2SL2.50ch01:90353227..90353624398+2
exonexon:Solyc01g100280.2.1.3SL2.50ch01:90353889..90354149261+n/a
exonexon:Solyc01g100280.2.1.4SL2.50ch01:90355234..90355397164+n/a
exonexon:Solyc01g100280.2.1.5SL2.50ch01:90356136..9035623297+1
exonexon:Solyc01g100280.2.1.6SL2.50ch01:90356340..9035638344+n/a
exonexon:Solyc01g100280.2.1.7SL2.50ch01:90356730..90356844115+1
exonexon:Solyc01g100280.2.1.8SL2.50ch01:90356922..90357275354+n/a
exonexon:Solyc01g100280.2.1.9SL2.50ch01:90357599..90357823225+n/a
intronintron:Solyc01g100280.2.1.1SL2.50ch01:90352970..90353226n/a+n/a
intronintron:Solyc01g100280.2.1.2SL2.50ch01:90353625..90353888n/a+n/a
intronintron:Solyc01g100280.2.1.3SL2.50ch01:90354150..90355233n/a+n/a
intronintron:Solyc01g100280.2.1.4SL2.50ch01:90355398..90356135n/a+n/a
intronintron:Solyc01g100280.2.1.5SL2.50ch01:90356233..90356339n/a+n/a
intronintron:Solyc01g100280.2.1.6SL2.50ch01:90356384..90356729n/a+n/a
intronintron:Solyc01g100280.2.1.7SL2.50ch01:90356845..90356921n/a+n/a
intronintron:Solyc01g100280.2.1.8SL2.50ch01:90357276..90357598n/a+n/a
intronintron:Solyc01g100280.2.1.9SL2.50ch01:90357824..90357964n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17699143%2Fdetails feature 17699143
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)