Solanum lycopersicum mRNA Solyc01g099190.2.1

mRNA details  
Name
Solyc01g099190.2.1
Type
mRNA
Length
3,477
Organism
Solanum lycopersicum
Description
Lipoxygenase (AHRD V1 **** Q42873_SOLLC); contains Interpro domain(s) IPR001246 Lipoxygenase, plant
Location(s)
SL2.50ch01:89490879..89495214
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0046872
  • GO:0055114
Length
4336
Nb exon
9
Sifter term
GO:0016165
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g099190.2.1 Lipoxygenase (AHRD V1 **** Q42873_SOLLC); contains Interpro domain(s) IPR001246 Lipoxygenase, plant

AATTGATTTTTATTTTTAAAATTCAATATAACCTTATGACTACACTTGTGCAACCAAACAGTATACTTGCAATACACTGCAATTACATCGTGGCATACAGGTCAACTCAATTACTAGGTTGTGTAATTATTGGGTTGATATTACTACCCTAGTAATTACACTTAATCCAATTATCTGGTGGCTATCCAAACTAAAGTAAGTTATGCGATCAAGTTTAGAGATTTTTTTTTTTTGTATTTTCTCTAATTTTAATGTAAAAGAGTTTTAAATTGAATTGAACACTATGGAAAGTAGCATTTCATTATCAAATAAATAGTTGACACGTACCTTTAATTTCATTTTATTCCAAGAGTTCCTTAATGAAGTTGAAAATTTATAAATTTGGTTAAAATTTCAAGTGCTAAACTTCCATATTTTTGGATGCTTTGGGTTCTTTTTGTGTGTTTTATTTGACATCACCATCATTATATTAACTAATCAGACAAATTTATACACTATGCATACCAAACTTAGTGAAAGCTTAAAAATTATAAATTTGTCAGAATAATTCTTTTAACTAATAATTTTTGGTATAAATATGAGATGTTTAAACTCGAAACCTCACGACTAAAATCTATCTTTTCTTTTCTTAATTAAAAAAAAAATATTTCTGTTTAAATAGTTAATCATGTCTTTGGGTGGAATTGTGGATGCCATCCTTGGAAAAGATGATAGGCCAAAAGTGAAAGGAAGAGTGATTTTGATGAAAAAAAATGTTCTAGACTTCATTAATATAGGTGCTTCAGTTGTTGATGGCATTTCTGATTTACTTGGCCAAAAAGTTTCTATCCAATTGATAAGTGGTTCTGTTAATTCAGATGGTTTGGAAGGGAAACTGAGCAATCCAGCATACTTAGAGAGTTGGCTTACAGACATCACCCCAATAACAGCAGGGGAATCAACTTTTAGTGTTACATTTGACTGGGATGACGAGTTTGGAGTTCCAGGAGCATTCATCATCAAGAATTTTCATCTTAACGAATTCTTTCTCAAGTCACTCACACTCGAAGATGTTCCTAATTATGGAAAAATCCATTTTGTATGCAATTCTTGGGTTTATCCTGCTTTTAGATACAAGTCTGACCGCATTTTCTTTGCCAATCAGGCTTATCTCCCAAGTGAAACACCACAACCATTGCGAAAATACAGAGAAAATGAACTGGTAGCTTTGCGAGGAGATGGAACTGGAAAGCTTGAAGAATGGGACAGGGTTTATGATTATGCTTGCTACAATGACTTGGGTGATCCAGATAAGGGGGAAGAGTATGCTAGGCCTATCCTTGGAGGGTCCTCTGAGTACCCGTATCCTCGTAGAGGCAGGACAGGCCGCGAACCAACCAAAGCAGATCCTAATTGCGAGAGCAGGAACCCATTGCCTATGAGCTTAGACATATATGTCCCAAGGGACGAGCGATTTGGTCATGTGAAGAAGTCAGACTTTTTGACGTCGTCCTTAAAATCCTCTTTGCAAACGCTTCTCCCTGCGTTTAAGGCTTTGTGCGATAACACGCCTAATGAGTTCAATAGCTTTGCGGATGTACTTAATCTCTATGAAGGAGGAATCAAGTTGCCTGAAGGCCCTTGGTTGAAAGCCATTACTGATAACATTTCCTCAGAGATACTAAAAGACATCCTTCAAACGGATGGTCAAGGCCTACTTAAGTACCCAACTCCTCAGGTTATTCAAGGCGATAAAACTGCATGGAGGACGGATGAAGAATTTGGGAGAGAAATGTTGGCAGGATCCAATCCTGTCTTAATCAGTAGACTCCAAGAATTTCCTCCGAAGAGCAAGTTGGATCCAACCATATATGGAAACCAAAACAGTACAATTACCACAGAACATGTACAGGATAAGTTGAATGGATTAACAGTGAATGAGGCAATCAAGAGTAACAGGTTATTCATATTGAACCACCATGACATCGTGATGCCACTATTGAGGAAAATTAACATGTCAGCAAACACAAAAGCCTATGCCTCAAGAACTCTGCTCTTCCTACAAGATGATAGAACTTTGAAGCCACTAGCAATTGAACTAAGCTTGCCACATCCAGACGGAGATCAATTTGGTACTGTTAGTAAAGTATATACACCAGCTGACCAAGGTGTTGAAGGTTCTATCTGGCAGTTTGCCAAAGCCTATGTAGCAGTGAATGACATGGGCATTCATCAGCTCATTAGCCACTGGTTGAATACACACGCGGTGATCGAACCATTTGTGATTGCAACAAATAGGCATCTAAGTGTGCTTCATCCCATTCATAAACTTCTTCATCCTCATTTCCGTAACACGATGAACATAAATGCTTTAGCAAGAGAGACCTTGACCTATGATGGTGGTTTTGAGACGTCTCTTTTTCCTACCAAATATTCCATGGAAATGTCAGCAGCAGCTTACAAAGATTGGGTTTTCCCTGAACAAGCACTTCCTGCTGATCTCCTCAAAAGAGGAGTGGCTGTTGAGGACTTGAGCTCCCCACATGGCATTCGTTTACTGATTCTGGACTATCCATATGCTGTTGATGGCTTGGAAATTTGGGCAGCAATCAAAAGTTGGGTAACAGAATATTGCAAGTTCTATTACAAATCTGACGAGACAGTAGAGAAAGACACTGAACTCCAAGCTTGGTGGAAGGAGCTCCGCGAAGAAGGACATGGCGACAAGAAAGATGAGGCTTGGTGGCCTAAACTGCAAACTCGACAAGAGCTCAGAGATTGTTGCACCATCATTATATGGATAGCTTCAGCACTTCATGCAGCACTCCATTTTGGCTTATACTCTTACGCTGGTTATCTCCCTAATCGCCCTACTTTAAGCTGTAATTTGATGCCAGAGCCAGGAAGTGTTGAGTATGAAGAGCTCAAGACAAATCCAGACAAGGTATTCCTAAAAACATTTGTTCCTCAGTTGCAATCACTGCTTGAAATTTCCATCTTTGAGGTCTCGTCAAGGCATGCTTCAGATGAGGTTTACTTGGGACAAAGGGACTCAATTGAATGGACAAAGGATAAAGAACCACTTGTAGCTTTTGAGAGGTTTGGAAAGATGCTAAGTGATATCGAGAATCGAATTATGATAATGAATAGTCATAAGAGTTGGAAGAACAGGTCAGGGCCTGTTAACGTTCCATATACGTTGCTCTTTCCCACAAGTGAAGAGGGACTCACAGGCAAAGGAATTCCCAACAGTGTGTCTATATAGAACTTATTATTCAATCAGTTTGTTGTGCTTGTGTTACTTGTTATTCCCAACCAAATAAACTCTTTGTTCCAAATAAAGAGTATTGTATTGTATTGTCTTGTGTGTTGTGTTGTATTGTATTATATTGTATAGTATTATTGATTTAAATACAATGTTTGTTGCACTTGTTTCTTGTTATTCCCAACCAAATAAACTCTTTGTTCCAAATAAAGCTGTAGTTGGTTTTATTTTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g099190.2.1SL2.50ch01:89491111..89494547859-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g099190.2SL2.50ch01:89490879..894952144,336-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g099190.2.1.1SL2.50ch01:89494361..89495214854-2
exonexon:Solyc01g099190.2.1.2SL2.50ch01:89493876..89494165290-n/a
exonexon:Solyc01g099190.2.1.3SL2.50ch01:89493564..89493804241-2
exonexon:Solyc01g099190.2.1.4SL2.50ch01:89493117..89493458342-2
exonexon:Solyc01g099190.2.1.5SL2.50ch01:89492936..8949302186-n/a
exonexon:Solyc01g099190.2.1.6SL2.50ch01:89492725..89492832108-n/a
exonexon:Solyc01g099190.2.1.7SL2.50ch01:89492342..89492649308-1
exonexon:Solyc01g099190.2.1.8SL2.50ch01:89491982..89492242261-1
exonexon:Solyc01g099190.2.1.9SL2.50ch01:89490879..89491865987-n/a
intronintron:Solyc01g099190.2.1.2SL2.50ch01:89494166..89494360n/a-n/a
intronintron:Solyc01g099190.2.1.3SL2.50ch01:89493805..89493875n/a-n/a
intronintron:Solyc01g099190.2.1.4SL2.50ch01:89493459..89493563n/a-n/a
intronintron:Solyc01g099190.2.1.5SL2.50ch01:89493022..89493116n/a-n/a
intronintron:Solyc01g099190.2.1.6SL2.50ch01:89492833..89492935n/a-n/a
intronintron:Solyc01g099190.2.1.7SL2.50ch01:89492650..89492724n/a-n/a
intronintron:Solyc01g099190.2.1.8SL2.50ch01:89492243..89492341n/a-n/a
intronintron:Solyc01g099190.2.1.9SL2.50ch01:89491866..89491981n/a-n/a
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Related viewsNone found
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