Solanum lycopersicum mRNA Solyc01g099160.2.1

mRNA details  
Name
Solyc01g099160.2.1
Type
mRNA
Length
2,955
Organism
Solanum lycopersicum
Description
Lipoxygenase (AHRD V1 **** Q9FT17_SOLLC); contains Interpro domain(s) IPR001246 Lipoxygenase, plant
Location(s)
SL2.50ch01:89475688..89483138
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0046872
  • GO:0055114
Length
7451
Nb exon
10
Sifter term
GO:0016165
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g099160.2.1 Lipoxygenase (AHRD V1 **** Q9FT17_SOLLC); contains Interpro domain(s) IPR001246 Lipoxygenase, plant

GAGACATATCCCTCTTGAAACTTCACAACCAAACTCATCATAATTTTCTATCTTTTTTCTTGTTTGCTAAGAAAGTTATCAAAATGATTTTGAACAAAATTGTGGATTCCATTACTGGAAAAGATGATGGGGAAAAAGTGAAAGGAACAGTTGTGTTAATGAAAAAAAATGTTTTGGATTTTACTGATGTAACTGCCTCAATTGTCGATGGTGCTCTTGAATTCCTTGGCAGAAGAGTTTCTTTTCAGTTAATCAGTAATTCTGTTCATGATGCTAATGGTTTAGAAGGGAAACTGAGCAATCCAGCATACTTGGAAAATTGGATTACAAACATTACTCCAGTAGTTGCAGGGGAATCAACTTTTAGTGTTACATTTGATTGGGATGATGATGAGTTTGGAGTTCCAGGAGCATTTATTATCAAGAATTTGCATTTCAGTGAATTCTTTCTCAAGTCACTCACACTTGAACATGTCCCTAATCATGGAAAAGTCCATTTTGTATGCAATTCTTGGGTGTATCCTGCTTCTAAATACAAGTCTGACCGCATTTTCTTCGCGAATCAGGCTTATCTCCCAAGTGAAACACCAGAATTGTTACGAAAATACAGAGAAAATGAACTAGTAGCCTTAAGAGGAGATGGAACTGGAAAGCTTGAAGAATGGGACAGGGTTTATGACTATGCTTATTACAATGACTTGGGTGATCCAGACAAAGGCCAAGAGTATGCTAGGCCTGTCCTTGGAGGATCATCTCAGTATCCGTATCCTCGTAGAGGCAGGACAGGACGCAAACCAACCAAGACAGATCCTAATACGGAGAGCAGGATCCCATTGCTTATGAGCTTAGATATATATGTGCCAAGGGACGAGCGATTTGGACATGTGAAGATGTCAGACTTCTTGACATTTGCTTTGAAATCCATTTCTCAGCTCCTCCTCCCCGAGTTTAAGGCTTTATTTGATAGCACGCCTAATGAATTTGATAGCTTTGCGGATGTACTTAAAATCTATGAAGGAGGAATCAAGTTGCCTCAGGGGCCTTTGTTTAAAGCCATTGTGGATGCTATTCCTTTGGAGATACTAAAACAACTCCTTTCTACTGATGGTGAAGGCCTACTCAAGTACCCGACACCTCAGGTTATCCAAGAGGATAAATCTGCCTGGAGGACGGATGAAGAATTCGGAAGAGAAATGCTAGCGGGAATCAATCCTGTCATAATTAGTAGACTCCAAGAATTCCCTCCAAAGAGCAAGTTGGATCCTAAAATATATGGCAACCAAACTAGCACAATTACCAGGGAGCAAATAGAGGACAAGTTAGATGGACTAACTGTTGATGAGGCAGTCAAGACTAACAGGCTATTCATATTGAACCATCATGACATCCTGATGCCGTATGTGAGGAGAATAAATACGACAACAAACACAAAAATGTATGCCACAAGAACTCTGCTCTTTCTGCAAGATGATGGAACTTTGAAGCCACTAGCAATTGAATTAAGTTTGCCACATCCAGACGGAGATCAATTTGGCGCTGTTAGCGAAGTTTTTACACCATCTGATCAAGGTGTTGAGGGTTCTATTTGGCAGTTGGCCAAAGCCTATGCAGCAGTGAATGATTCAGGCGTGCATCAGCTCGTCAGTCACTGGCTAAACACACACACAGTGATCGAGCCATTTGTGATTGCAACAAATAGGCAACTAAGTGTGCTTCACCCTATTCATAAGCTTCTCCTTCCTCATTTTCGTGATACAATGAACATAAATGCTTTAGCAAGACAAATCCTAATCAATGGTGGTGGACTTCTTGAATTGACCGTCTTTCCTGCCAAATATTCCATGGAACTGTCATCAGTAATTTACAAAGACTGGATTTTTCCTGAACAAGCACTTCCTGCTGATCTCATCAAAAGAGGAGTGGCTGTTGAGGACTCAAACTCCCCACATGGTGTTCGCTTACTGATTCAGGACTATCCATATGCTGTTGATGGGTTGGAAATTTGGTCAGCAATCAAAAGTTGGGTAACAGAATATTGCAACTACTATTACAAATCAGATGACGCGGTACAGAAAGACGCTGAACTCCAAGCCTGGTGGAAGGAGCTCCGCGAAGAAGGACATGGCGACAAGAAAGATGAGCCTTGGTGGCCTAAAATGCAAAGTGTGCAAGAGCTCATAGATTCCTGCACCATCACTATATGGATAGCTTCAGCACTTCATGCAGCAGTTAATTTTGGGCAATACCCTTATGCTGGTTATCTCCCTAATCGGCCTACATTAAGCCGGAAATTCATGCCAGAGCCAGGAAGTGCTGAGTATGAAGAGCTGAAGAGAAATCCAGATAATGTATTCCTCAAAACAATCACTCCTCAGCTGCAGACATTGGTTGGAATTTCCCTTATAGAGCTCTTGTCAAGGCATGCTTCGGATACCCTTTACCTCGGACAGAGGGACTCACCTGAATGGACAAAGGATCAAGAACCACTTTCAGCTTTTGAGAGGTTCGGAAAGAAGTTGGGTGAGATCGAGGATCGAATTATTCAGATGAATGGTGATAATCAGAAATGGAAGAACAGGTCAGGGCCTGTTAAAGTTCCATATACTTTGCTCTTTCCCACCAGTGAAGAGGGACTCACAGGCAAAGGAATCCCCAACAGTGTGTCTATATAGAACTTATTATTGTATCCCCTTGTTGTGCTTGTTTCTTCATATTAATTCCCAATAATATCACCAAATAAAATTCTAGTTACAGTAGGGCTGTAATGTTGTTGGAGTTACTGTAATTATATTGGCTATAATGTTGTTGGAGTTATCGTAATTATATTGGCTATAATGTTGTCGGAGTTACTGTAATGTTGTTGAAGTTATATGCTATATTCATAAACTTTTTTTTGTAATGTTGTTGGAGTTATTTTTATGTAATGTTGTTGGCGTTATATGTAATCAAGAGTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g099160.2.1SL2.50ch01:89475770..89482783863+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g099160.2SL2.50ch01:89475688..894831387,451+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g099160.2.1.1SL2.50ch01:89475688..89475960273+n/a
exonexon:Solyc01g099160.2.1.10SL2.50ch01:89483125..8948313814+1
exonexon:Solyc01g099160.2.1.2SL2.50ch01:89479730..89480022293+n/a
exonexon:Solyc01g099160.2.1.3SL2.50ch01:89480096..89480336241+2
exonexon:Solyc01g099160.2.1.4SL2.50ch01:89480417..89480758342+n/a
exonexon:Solyc01g099160.2.1.5SL2.50ch01:89480863..8948094886+2
exonexon:Solyc01g099160.2.1.6SL2.50ch01:89481042..89481149108+2
exonexon:Solyc01g099160.2.1.7SL2.50ch01:89481259..89481566308+n/a
exonexon:Solyc01g099160.2.1.8SL2.50ch01:89481653..89481916264+n/a
exonexon:Solyc01g099160.2.1.9SL2.50ch01:89482027..894830521,026+1
intronintron:Solyc01g099160.2.1.1SL2.50ch01:89475961..89479729n/a+n/a
intronintron:Solyc01g099160.2.1.2SL2.50ch01:89480023..89480095n/a+n/a
intronintron:Solyc01g099160.2.1.3SL2.50ch01:89480337..89480416n/a+n/a
intronintron:Solyc01g099160.2.1.4SL2.50ch01:89480759..89480862n/a+n/a
intronintron:Solyc01g099160.2.1.5SL2.50ch01:89480949..89481041n/a+n/a
intronintron:Solyc01g099160.2.1.6SL2.50ch01:89481150..89481258n/a+n/a
intronintron:Solyc01g099160.2.1.7SL2.50ch01:89481567..89481652n/a+n/a
intronintron:Solyc01g099160.2.1.8SL2.50ch01:89481917..89482026n/a+n/a
intronintron:Solyc01g099160.2.1.9SL2.50ch01:89483053..89483124n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17697702%2Fdetails feature 17697702
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