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Solanum lycopersicum mRNA Solyc01g098190.2.1

mRNA details  
Name
Solyc01g098190.2.1
Type
mRNA
Length
2,216
Organism
Solanum lycopersicum
Description
Sodium/hydrogen exchanger (AHRD V1 **** Q1JRA2_SOLLC); contains Interpro domain(s) IPR018407 Na+/H+ exchanger, isoforms 1-4, conserved region
Location(s)
SL2.50ch01:88781594..88787300
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016021
Length
5707
Nb exon
16
Sifter term
GO:0015385
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g098190.2.1 Sodium/hydrogen exchanger (AHRD V1 **** Q1JRA2_SOLLC); contains Interpro domain(s) IPR018407 Na+/H+ exchanger, isoforms 1-4, conserved region

ATTTTTGGGAGCAATTTCACGACGAAAACTCGAAGCAGACAAATATTTGAACTTTACTTTTGCACTTTTCTCTTCCCATTTTTCTTTTTCTTTTTCTGGTTTCAGAAAGTTTTGAGGATTTGTAATATTTTTTCTGCTCTGTTTTGCGGCGCTTTCAGAATGCAATTATATTGGTGAAAGGCGCTGGAAGCTTTTTTGTTTGCATTGAAGATTGACATGACCGGAGCTAATCGCAATGAAAACTTGGTGAAGTTGAAACAAAGTTGGTGAACTGTTGTATTACAAAGTGGCAAAAGTGATGGCTTCTGTGCTGGCTTCTCTGTTTCCAAAACTGGGATCTTTGGGTACTTCAGATCATGCTTCTGTTGCATCTATCAACCTCTTTGTGGCACTCCTTTGTGCTTGCATTATCATTGGTCATCTCTTGGAGGAGAACCGCTGGGTTAATGAGTCCATTACTGCCCTCATAATTGGTTTGGGTACAGGAGTGGTTATCTTGCTTGTAAGTGGTGGAAAGAGCTCACACCTTTTGGTTTTCAGTGAAGATCTCTTTTTCATATATCTACTTCCTCCAATCATATTTAATGCAGGGTTCCAGGTAAAAAAGAAGCAATTTTTCGTGAACTTCATGACTATAATGCTGTTCGGAGCCATTGGTACCCTGGTCTCATGTGCCATTATATCATTAGGTGCCATTCAAACTTTCAAGAAGTTGGACATTGAATTCCTAGATATTGGGGATTATCTTGCAATTGGAGCAATATTTGCTGCCACAGATTCCGTCTGCACATTGCAGGTCCTACATCAGGATGAGACACCCCTCCTTTACAGTCTTGTATTTGGAGAAGGAGTTGTAAATGATGCTACATCGGTGGTGCTTTTCAATGCTATTCAAAACGTTGACCTTACGAGCTTGAATCCCAGTATAGCCCTCAGTTTCCTTGGCAACTTCTTCTATCTGTTCCTTGCTAGCACTTTACTGGGAGCAGGAACTGGTCTTCTTAGTGCTTACATTATCAAGAAGCTGTATTTTGGCAGGCACTCCACAGATCGTGAGGTTGCCCTTATGATGCTCATGGCTTATTTATCATACATGCTGGCCGAACTATTCTATTTGAGTGGGATTCTCACCGTATTTTTCTGTGGTATTGTGATGTCTCATTACACTTGGCACAATGTGACCGAGAGTTCAAGAGTCACTACAAGGCACACTTTTGCAACTTTGTCATTTCTTGCAGAGACTTTCCTCTTCCTCTATGTGGGCATGGATGCTTTGGATATCGAGAAGTGGAAATTTGTTGGTGACAGGCCTGGATTATCAATTTCCGCGAGTTCGATACTGATGGGACTAATCTTGCTGGGGAGAGCTGCTTTTGTTTTTCCATTATCATACTTATCCAACTTAATGAAGAAATCCTCGGAAGAAAAAATTACCTTTAGGCAGCAAGTGATAATATGGTGGGCAGGTTTGATGAGAGGCGCAGTGTCCATGGCACTGGCATATAATAAGTTCACTCATGGGGGACACACTCAACTGCAGGACAATGCAATAATGATTACCAGCACGATAACCATTGTTCTATTCAGCACAATGGTATTTGGTCTAATGACAAAACCCCTTATAAGTCTCCTGCTGCCACCACAGAGGCAATTGAGTACAGTGTCATCAGGTGCAAATACTCCTAAGTCTCTAACAGCCCCACTCCTAGGCAGTCGAGAGGACTCTGAAGGTGATTTAAATGTCCCAGATCTTCCTCACCCACCAAGTTTGAGGATGCTACTTACCGCACCAAGTCATAAAGTGCATCGGTACTGGCGCAAGTTTGACGATGCATTCATGCGCCCTATGTTTGGTGGTCGGGGATTTGCTCCTCCTGCTCCTCGTTCTCCAACGGAACACGGTCCATGATGTGCACTAGAAAAATGAAATTGATGTAAAAAAGGAAGTCGCCAAGGGACGTCCAGGGAATCCTAAAGATTCTGTGTACACAATTGCTGACAGCTTCACCCAGGTCCTTGATCATTTGGTCCTGCTGTCATTTACATTGCTTTAGCAAACTCTAAAACTGATAAAATGTTTCATAAAATTCAGCAAAATCCCCTCATTTGCAGTGGTGGATTTACGAAACGGTGAAGCTCTGGCTGACAACGGCGAGTATGTAAGTTAATCCTGAAAATGGCAATATCTCTATTCAAACTTATTGTAAATTTTGGCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g098190.2.1SL2.50ch01:88782535..88786993537+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g098190.2SL2.50ch01:88781594..887873005,707+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g098190.2.1.1SL2.50ch01:88781594..88781766173+n/a
exonexon:Solyc01g098190.2.1.10SL2.50ch01:88785255..8878532167+n/a
exonexon:Solyc01g098190.2.1.11SL2.50ch01:88785406..88785506101+1
exonexon:Solyc01g098190.2.1.12SL2.50ch01:88785817..88785918102+n/a
exonexon:Solyc01g098190.2.1.13SL2.50ch01:88786098..88786236139+1
exonexon:Solyc01g098190.2.1.14SL2.50ch01:88786312..8878637463+1
exonexon:Solyc01g098190.2.1.15SL2.50ch01:88786502..8878658584+n/a
exonexon:Solyc01g098190.2.1.16SL2.50ch01:88786679..88787300622+n/a
exonexon:Solyc01g098190.2.1.2SL2.50ch01:88782201..8878223434+n/a
exonexon:Solyc01g098190.2.1.3SL2.50ch01:88782445..88782709265+n/a
exonexon:Solyc01g098190.2.1.4SL2.50ch01:88782890..88783008119+n/a
exonexon:Solyc01g098190.2.1.5SL2.50ch01:88783128..8878322598+n/a
exonexon:Solyc01g098190.2.1.6SL2.50ch01:88783961..8878402060+1
exonexon:Solyc01g098190.2.1.7SL2.50ch01:88784116..8878416247+2
exonexon:Solyc01g098190.2.1.8SL2.50ch01:88784241..88784435195+2
exonexon:Solyc01g098190.2.1.9SL2.50ch01:88784560..8878460647+n/a
intronintron:Solyc01g098190.2.1.1SL2.50ch01:88781767..88782200n/a+n/a
intronintron:Solyc01g098190.2.1.10SL2.50ch01:88785322..88785405n/a+n/a
intronintron:Solyc01g098190.2.1.11SL2.50ch01:88785507..88785816n/a+n/a
intronintron:Solyc01g098190.2.1.12SL2.50ch01:88785919..88786097n/a+n/a
intronintron:Solyc01g098190.2.1.13SL2.50ch01:88786237..88786311n/a+n/a
intronintron:Solyc01g098190.2.1.14SL2.50ch01:88786375..88786501n/a+n/a
intronintron:Solyc01g098190.2.1.15SL2.50ch01:88786586..88786678n/a+n/a
intronintron:Solyc01g098190.2.1.2SL2.50ch01:88782235..88782444n/a+n/a
intronintron:Solyc01g098190.2.1.3SL2.50ch01:88782710..88782889n/a+n/a
intronintron:Solyc01g098190.2.1.4SL2.50ch01:88783009..88783127n/a+n/a
intronintron:Solyc01g098190.2.1.5SL2.50ch01:88783226..88783960n/a+n/a
intronintron:Solyc01g098190.2.1.6SL2.50ch01:88784021..88784115n/a+n/a
intronintron:Solyc01g098190.2.1.7SL2.50ch01:88784163..88784240n/a+n/a
intronintron:Solyc01g098190.2.1.8SL2.50ch01:88784436..88784559n/a+n/a
intronintron:Solyc01g098190.2.1.9SL2.50ch01:88784607..88785254n/a+n/a
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Related viewsNone found
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