Solanum lycopersicum mRNA Solyc01g096750.1.1

mRNA details  
Name
Solyc01g096750.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc01g096750.1.1
Length
2,646
  
Description
Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch01:87775416..87780067
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
4652
Nb exon
22
Sifter term
GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g096750.1.1 Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

ATGGCCTCTTCAAAAGATGAAGCTACAGCAACAAAATTAGACCGTCATCCTATGGCTCGACAAGGAACTGGGTCCAAGGGACAGAAGATTCGCCTGCTCACCAACCATTTCAAAGTAGGGATGAACAACACTGATGGGCACTTCTTCCACTATAGCGTTGCTATAAACTATGAAGATGGAAACCCCGTAGAGGTGAAAGGAGTTGGAAGAAAAATCCTTGACAAGGTCCACCAAACATATTCAATGGAGCTAGCTGGCAAAGACTTTGCTTATGATGGGGAGAAGAGCTTGTTCACTATTGGTGCACTGCCTGGGAACAAGTTAGAGTTTGATGTTGTCCTGGAGGACGTCTCGTCATCTAGAACTGATCGAGGCAGCCCTGATGGGAGCCCAAGTGATGTTGATAGGAAAAGATCAAAGAAGCAGCCATGGTCAAAGGCATACAAAGTGGTAATTAAGTATGCTGCAAAAATACCAATGCAAGCCATTGCAAATGCACTCCGGGGACAAGATTCTGAGCAGTATCAAGAGGCAGTGAGAGTGCTTGATATAATTCTGAGGCAACATGCTGCCAAACGGGGCTGCCTTATTGTGCGCCAGTCTTTTTTTCACAATGAGCCTCGAAACTTTGTTGATCTTGGTGGAGGAGTTTCAGGATGCCGAGGTTTCCATGCAAGCTTCCGGGCCACGCAGGGAGGCCTTTCATTGAACATGGATGTGTCAACCACAATGATTGTGAAGCCAGGAGCAGTGATTGATTTCCTTCTTGCCAATCAAAATGCAAAAGAACCTTACCAGATTGATTGGTCCAAGGCAAAGAGGATGCTGAAGAGTCTGAGGATCAAGACCAGCCCTTCAAATAGGGAATACAAAATCACCGGCCTCAGTGATAAGCCTTGCAATGAGCAGACTTTCACGTTAAAGCAGAAAAATGGGGATGGGGGAGTGCAAGAGGTTGAGACGACCGTGTATGATTATTTCACTTATCATCGCCGTATTCCTTTACAATATTCTGGAGAACTCCCCTGCATTAACGTTGGGAAACCAAAGCACCCAACTTTTATTCCTCTTGAGCTATGCACTCTGGTGTCTCTGCAACGCTACACCAAGGCCCTGTCCAATCTACAAAGAGCTTCCCTTGTAGAAAAATCCCGACAAAAGCCCCAAGAGAGGATGAGAGCTTTGACCGATGCCCTAAAGACCAGCAACTATAAGGCTGATCCTCTTCTTGGATCTGCTGGAATTTCGATCAGTGATCAGTTTACACAAGTTGATGGTCGTATCTTGCCAACTCCAAAGTTGAGGGTGGGGGATGATCAAGACTTGTTTCCTAGAAATGGAAGATGGAATTTTAACCAGAAGCGATTGGTTGAACCAGTCAAACTTGAGCGTTGGGCAGCTGTGAACTTTTCTGCCCGTTGTGATGTTCGTAAGCTTTGTATGGATCTACAAAGGTGTGGGAAAATGAAAGGAATTTTCATCAGTCCACCATTTCAGCATATCTTTGAGGAGAATCAGCAGTACAGGCGAAATCCTGCTCCTGTGAGAGTTGAGAAAATGCTAGAAGAATTAAAATCAAAACTTCCAGCTCCACCTCAGTTCCTTCTATGCATTCTTCCAGAGAGAAAGAACTCTGACCTCTATGGCCCCTGGAAGAAAAGGAATTTAGCTGATCTTGGAATTGTTACACAATGCATTGCTCCAACAAAGATCAATGATCAGTACCTTACCAATGTGCTCTTGAAAATCAATGCAAAGCTGGGTGGCATGAATTCCTTTTTGACTACAGAGCTTTCCCCTACACTACCTCAGATTTCCAAAGTCCCCACTATTATTATTGGGATGGATGTCTCTCATGGCTCACCTGGACGAGCAGATGCTCCATCCATTGCAGCGGTGGTCAGCTCTAGACAATGGCCCTTTATTTCACGCTATCGAGCAGCTGTTTGTACACAGTCACCCAAGCTGGAAATGATAGATTCTCTGTACAAGAAAGTATCAGATACCGTAGATGAGGGCCTTTTCAGGGAGCTGCTCAGGGACTTCTACGTTAGTTCTAAAAATGTGAAACCTGAGCATATCATCATCTTCAGAGATGGAGTAAGTGAGTCCCAGTTCAACCAAGTCATAAACATTGAGCTCAATCAGATTATCGAGGCCTGTAATCATCTGGAAGAAACTTGGTCTCCAAAGTTCACTGTCATTGTTGCACAAAAGAACCACCACACAAGATTTTTCCAGACCAACTCACCGGATAATGTTCCTCCTGGGACTGTGATTGACAATGCAGTTTGCCATCCAAAGACCAATGACTTCTACATGTGTGCTCATGCTGGACCTATTGGAACAACAAGACCTACACACTACCATATTCTGCATGATGAAATTGGATTCTCAGCAGATGACATGCAAGAGCTGGTCCATTCATTGTCTTATGTGTATCAGAGAAGTACCACAGCCATCTCTGTTGTTGCACCTATATGTTATGCCCACTTGGCAGCAGCACAGGTGGCACAGTTTATCAAGTTTGATGAAATTTCTGAGGCCACCTCGAGCCATGGTGGAGTTTCAACAGCTGGTAGTGTGCTAGTCCCTCAATTGCCTCGGCTTCACAAGAATGTTCGCAGTTCAATGTTCTTCTGCTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g096750.1.1SL2.50ch01:87775415..87780067882+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g096750.1SL2.50ch01:87775416..877800674,652+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g096750.1.1.1SL2.50ch01:87775416..87775571156+n/a
exonexon:Solyc01g096750.1.1.10SL2.50ch01:87777554..8777761663+n/a
exonexon:Solyc01g096750.1.1.11SL2.50ch01:87777698..87777811114+n/a
exonexon:Solyc01g096750.1.1.12SL2.50ch01:87777912..87778080169+n/a
exonexon:Solyc01g096750.1.1.13SL2.50ch01:87778207..87778319113+2
exonexon:Solyc01g096750.1.1.14SL2.50ch01:87778410..87778547138+n/a
exonexon:Solyc01g096750.1.1.15SL2.50ch01:87778635..87778765131+n/a
exonexon:Solyc01g096750.1.1.16SL2.50ch01:87778852..8777891766+1
exonexon:Solyc01g096750.1.1.17SL2.50ch01:87779028..8777909164+1
exonexon:Solyc01g096750.1.1.18SL2.50ch01:87779175..87779286112+n/a
exonexon:Solyc01g096750.1.1.19SL2.50ch01:87779380..8777945374+2
exonexon:Solyc01g096750.1.1.2SL2.50ch01:87775701..87775906206+n/a
exonexon:Solyc01g096750.1.1.20SL2.50ch01:87779544..8777963895+n/a
exonexon:Solyc01g096750.1.1.21SL2.50ch01:87779742..8777977332+1
exonexon:Solyc01g096750.1.1.22SL2.50ch01:87779892..87780067176+2
exonexon:Solyc01g096750.1.1.3SL2.50ch01:87776001..87776216216+1
exonexon:Solyc01g096750.1.1.4SL2.50ch01:87776297..87776433137+1
exonexon:Solyc01g096750.1.1.5SL2.50ch01:87776507..8777660498+2
exonexon:Solyc01g096750.1.1.6SL2.50ch01:87776675..8777677298+n/a
exonexon:Solyc01g096750.1.1.7SL2.50ch01:87776870..87777032163+1
exonexon:Solyc01g096750.1.1.8SL2.50ch01:87777107..87777223117+n/a
exonexon:Solyc01g096750.1.1.9SL2.50ch01:87777294..87777401108+n/a
intronintron:Solyc01g096750.1.1.1SL2.50ch01:87775572..87775700n/a+n/a
intronintron:Solyc01g096750.1.1.10SL2.50ch01:87777617..87777697n/a+n/a
intronintron:Solyc01g096750.1.1.11SL2.50ch01:87777812..87777911n/a+n/a
intronintron:Solyc01g096750.1.1.12SL2.50ch01:87778081..87778206n/a+n/a
intronintron:Solyc01g096750.1.1.13SL2.50ch01:87778320..87778409n/a+n/a
intronintron:Solyc01g096750.1.1.14SL2.50ch01:87778548..87778634n/a+n/a
intronintron:Solyc01g096750.1.1.15SL2.50ch01:87778766..87778851n/a+n/a
intronintron:Solyc01g096750.1.1.16SL2.50ch01:87778918..87779027n/a+n/a
intronintron:Solyc01g096750.1.1.17SL2.50ch01:87779092..87779174n/a+n/a
intronintron:Solyc01g096750.1.1.18SL2.50ch01:87779287..87779379n/a+n/a
intronintron:Solyc01g096750.1.1.19SL2.50ch01:87779454..87779543n/a+n/a
intronintron:Solyc01g096750.1.1.2SL2.50ch01:87775907..87776000n/a+n/a
intronintron:Solyc01g096750.1.1.20SL2.50ch01:87779639..87779741n/a+n/a
intronintron:Solyc01g096750.1.1.21SL2.50ch01:87779774..87779891n/a+n/a
intronintron:Solyc01g096750.1.1.3SL2.50ch01:87776217..87776296n/a+n/a
intronintron:Solyc01g096750.1.1.4SL2.50ch01:87776434..87776506n/a+n/a
intronintron:Solyc01g096750.1.1.5SL2.50ch01:87776605..87776674n/a+n/a
intronintron:Solyc01g096750.1.1.6SL2.50ch01:87776773..87776869n/a+n/a
intronintron:Solyc01g096750.1.1.7SL2.50ch01:87777033..87777106n/a+n/a
intronintron:Solyc01g096750.1.1.8SL2.50ch01:87777224..87777293n/a+n/a
intronintron:Solyc01g096750.1.1.9SL2.50ch01:87777402..87777553n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17694617%2Fdetails feature 17694617
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