Solanum lycopersicum mRNA Solyc01g095580.2.1

mRNA details  
Name
Solyc01g095580.2.1
Type
mRNA
Length
1,840
Organism
Solanum lycopersicum
Description
GH3 family protein (AHRD V1 ***- B9I8V1_POPTR); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter
Location(s)
SL2.50ch01:86794503..86797203
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
2701
Nb exon
4
Sifter term
  • GO:0080123
  • GO:0070566
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g095580.2.1 GH3 family protein (AHRD V1 ***- B9I8V1_POPTR); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter

GGAAGCACTGTGTATCTACAGCAATGGGGTTTAAATGGAAGAACTGATCCTGAGATTTTCAAGAGTTGTGTTCCTCTTGTCACTCACAAAGATTTAGAGCCTTATATTCAAAGAATTGCTGATGGGGATCTTTCCCCTGTTCTCACTGGAAAACCCATTACAACAATCTCATTAAGTTCAGGTACTACTCAGGGAAGGCCAAAGTTTGTACCTTTCAATGATGAATTGATGGAATCCACTATGCAGATATATAAAACTTCTTTTGCTTTTAGGAATAGAGAATTCCCAATTGAGAATGGGAAGGCATTGCAGTTCATTTACAGCAGCAAGCAGTTCAAGACAAAGGGAGGTTTGGCAGCTGGAACTGCAACTACCAATGTATATCGTAACGCACATTTCAAGAAGACAATGAGGGCAATGCAAACCCCATGTTGTAGCCCTGATGAAGTTATATTTGGTCCTGATTTCCACCAATCTTTGTACTGCCATCTCTTGTGTGGGCTTATTTTTCGTGACGAAGTGCAAGTTGTCTCCTCTACATTTGCCCACAGCATTGTCCATGCTTTTAGAACTTTCGAACAAGTCTGGGAAGAACTTGTTGCAGACATAAGAGAGGGAGTCATCTCTAGCCGAGTCACGGTCCCTTCCATGAGATCAGCAATTATGAAATTACTGAAGCCTGATCCAGAACAGGCTGATTCCATTTATAATAAGTGTTCTGGATTAAGCAATTGGTACGGTTTGATTCCCGTGCTCTTCCCAAGCGCAAGGTACATATACGGAATCATGACAGGGTCCATGGAACCTTACCTCAAGAAACTGAGGCATTATGCAGGGGAGCTACCACTACTGAGTGCAGATTATGGTTCTTCTGAAGGATGGATTGGTGCAAATGTCAATCCCAAGTTACCTCCTGAGCTAGTTACTTATGCAGTGCTTCCTAATATCGGTTATTTCGAATTCATTCCTCTCAGGGTAAACTTAGATGGCCTTGAGCCTACACCAGTGGGTCTTGCTGAAGTTAAACTAGGTGAAGAGTATGAAATTGTTGTCACCAACTTTGCAGGGTTGTATCGTTACAGGCTCGGTGATGTCGTGAAAATAAAAGGATTCCACAATGCCACACCAGAACTCCAGTTTATTTGTCGTAGCAATCTTATACTAAGCATAAACATTGACAAGAGCACTGAGAAAGACTTACAGCTAGCTGTAGAAGCAGCAGCCAGGCTCTTAGTAGACGAAAAACTAGAGGTAGTTGATTTCACTAGCCACGCGAATGTTGCAACTGATCCAGGACACTACGTGGTTTTCTGGGAACTCAGTGGTGAAGCAAGTGATGAAACATTGCAAGAATGCTGCAATTGTTTGGACAAATCGTTTGTAGATGCAGGGTACGTGGGGTCTCGGAAGGTCAATGTAATTGGAGCACTTGAGCTTAGAGTTGTGAAGAAGGGGACATTTCATAAGATATTAGATCATTTTGTAGGCTTAGGAGGTGCTGTTAGCCAGTTCAAGACTCCAAGATGTGTTGGTCAAAACAACAGCAGACTGCTACAGATACTATGTTATGATGTTGTCAAGAGCTATTTTAGTACTGCCTACTAATGATGTTGAACTTGGATGTATCATTAATAATTGTACAAAATTGAAAAGTTGTATGAAGAAGTGGATGCATTGCTCTTTAATTTGGATCTTTCATAGCTATTTGTGTGATCATTCCAAAAGATACTAACAAAGAAATGTATACACAGTTATATTAGGAATGAAAAAAGAAGTAAGTTGTTCAAAGTTTACTAAATTTTGTATTTAAATATATATATTATGTGAAGTTTGTACTCAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g095580.2.1SL2.50ch01:86794893..86796968459+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g095580.2SL2.50ch01:86794503..867972032,701+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g095580.2.1.1SL2.50ch01:86794503..86794678176+n/a
exonexon:Solyc01g095580.2.1.2SL2.50ch01:86794842..86794943102+n/a
exonexon:Solyc01g095580.2.1.3SL2.50ch01:86795310..86796097788+n/a
exonexon:Solyc01g095580.2.1.4SL2.50ch01:86796430..86797203774+1
intronintron:Solyc01g095580.2.1.1SL2.50ch01:86794679..86794841n/a+n/a
intronintron:Solyc01g095580.2.1.2SL2.50ch01:86794944..86795309n/a+n/a
intronintron:Solyc01g095580.2.1.3SL2.50ch01:86796098..86796429n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17693156%2Fdetails feature 17693156
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