Solanum lycopersicum mRNA Solyc01g091630.2.1

mRNA details  
Name
Solyc01g091630.2.1
Type
mRNA
Length
3,021
Organism
Solanum lycopersicum
Description
Homeobox-leucine zipper protein ATHB-9 (AHRD V1 *-*- ATBH9_ARATH); contains Interpro domain(s) IPR002913 Lipid-binding START
Location(s)
SL2.50ch01:85221417..85226892
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0045449
Length
5476
Nb exon
9
Sifter term
GO:0030528
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g091630.2.1 Homeobox-leucine zipper protein ATHB-9 (AHRD V1 *-*- ATBH9_ARATH); contains Interpro domain(s) IPR002913 Lipid-binding START

TTGGCTTTCTTTTCTTGTTATTTTTCTTTCAAGAGTAAAAATTAGAGAGGAAGTTGGAGACATTTGGATTCGTCCTTGTGTCTCCTCTACCTCTCATAATTTTTCTCCCAACTTTTTAGCTCAAAAAAGATACAGTGAATCTGTCAAATATACAAAAAAAGAAAAAGTTTAGTTCTTTTTGAGTTTCTCTTGCTTTATTTCATGAATTTTGGGGGTTTTCTTGATAATAATTCTGGTGGTGGCGGTGCAAGAATTGTTGCTGATATACCATTTAATCACAACAACAGCAGCAGCAACAACGACAATAAAAACAATATGCCCACTGGTGCAATTTCTCAGCCAAGACTTCTTCCTCAATCTCTTGCCAAGAACATGTTCAACTCCCCAGGACTTTCTCTTGCTCTTCAAACAGGTATGGAAGGGCAAAGTGAGGTAACAAGAATGGCTGAAAACTACGAGGGAAATAACAGTGTTGGTAGAAGGAGTAGAGAAGAAGAACCAGACAGCAGATCTGGAAGTGATAACTTGGAAGGTGCATCGGGTGATGAACAAGATGCTACCGACAAACCACCAAGGAAGAAAAGATACCACCGACACACTCCTCAGCAAATCCAAGAACTTGAATCTCTTTTCAAGGAGTGTCCTCATCCTGATGAGAAACAAAGGTTGGAGTTAAGCAAAAGGCTTTCTTTGGAGACTAGACAAGTCAAGTTTTGGTTCCAAAATCGTAGAACTCAGATGAAGACTCAACTGGAACGCCATGAGAATTCGATACTAAGGCAAGAGAATGATAAGCTTCGTGCAGAAAACATGTCTATAAGAGAGGCAATGAGAAATCCAATTTGTACTAATTGTGGTGGTCCAGCAATGATTGGTGAGATCTCTCTTGAGGAGCAACATCTTAGGATTGAAAATGCTAGGCTGAAAGATGAATTAGATCGAGTTTGTGCACTTGCTGGCAAGTTTTTGGGGCGACCCATTTCATCTTTAGTAACCTCTATGCCTCCCCCAATGCCTAATTCAAGTTTGGAACTTGGAGTTGGAAGTAATGGATTTGGTGGTATGAGTAATGTACCAACAACACTCCCCTTAGCACCTCCTGATTTCGGTGTTGGGATTTCAAATTCTTTACCAGTTGTGCCTTCAACTAGACAGTCAACTGGAATTGAGAGATCACTTGAAAGATCCATGTATCTTGAACTTGCTTTGGCTGCCATGGAGGAATTGGTAAAAATGGCACAAACTGATGAACCTCTTTGGTTCAGGAGCATTGAAGGTGGTAGAGAAATACTTAACCATGAAGAGTACATAAGGACATTTACTCCTTGCATTGGTATGAGACCAAACAGTTTTATTTCAGAGGCTTCCAGGGAGACAGGCATGGTTATAATCAATAGTTTAGCTCTTGTTGAGACATTAATGGACTCTAACAAATGGGCAGAAATGTTTCCATGTTTGATTGCTAGAACCTCAACAACAGATGTTATATCAAGTGGTATGGGTGGAACCAGAAATGGTGCACTTCAGCTGATGCATGCTGAACTCCAAGTGCTTTCACCATTAGTACCAATTAGAGAGGTCAATTTCCTGCGTTTCTGCAAACAACATGCTGAAGGTGTCTGGGCTGTCGTTGATGTATCGATTGATACCATCCGTGAAACTTCTGGTGCACCAACGTTTCCAAATAGCAGAAGGCTTCCTTCTGGCTGTGTTGTTCAAGATATGCCCAATGGCTACAGCAAAGTTACATGGGTAGAACATGCCGAATATGAAGAGGGTGCAAATCACCATCTTTACCGGCAGTTAATTAGCGCGGGTATGGGGTTTGGCGCACAAAGATGGGTTGCAACCCTCCAACGCCAGTGTGAGTGTCTTGCAATTCTCATGTCATCCACCGTGTCTGCCAGGGATCATACAGCAATAACTCCAAGTGGGAGGCGTAGCATGTTGAAGCTAGCACAACGCATGACAAACAACTTTTGTGCTGGTGTTTGTGCTTCAACGGTACACAAGTGGAACAAACTTTGTGCAGGTAATGTTGATGAAGATGTACGTGTCATGACTCGAAAGAGCGTCGATGACCCTGGTGAACCAGCAGGGATCGTCTTAAGCGCTGCTACTTCCGTTTGGTTGCCCGTTTCCCCTCAAAGACTCTTTGATTTCCTCCGTGACGAACGCCTCCGTAGCGAATGGGATATCCTATCCAACGGTGGCCCTATGCAAGAAATGGCTCATATTGCCAAAGGCCAAGATCATGGCAACTGCGTCTCTCTCCTTCGTGCTAGTGCTATGAACGCGAATCAGAGCAGCATGTTGATACTTCAGGAGACTTGCATAGACGCGGCTGGGGCGCTTGTTGTATACGCGCCAGTTGATATTCCGGCAATGCACGTGGTGATGAACGGTGGAGATTCGGCTTACGTGGCTTTGCTTCCTTCGGGATTCTCAATTGTACCCGACGGCCCAGGATCTCGTGGGTCCAATGGGCCTTCATGTAATGGGGGCCCAGATCAAAGAATTAGCGGGTCACTCTTGACGGTAGCCTTTCAGATATTGGTGAATAGTCTTCCTACAGCCAAGCTTACTGTGGAATCAGTGGAAACAGTCAATAATCTTATATCATGCACTGTTCAGAAGATTAAAGCTGCACTTCAATGCGAAAGCTAATATTTGAGACAAGGAGAACAACTTTTTTTAATATATTTTTTTTTAATAATATATAGTTTAACTAGTAGAAAGAAAAAAAAAAAGTGGTGCGGTAATGGAAGGAGTGGAGGCTTGATCATTGAAGAACTCGAGCTGAATTGGAGGCTGAGTCAAGAACGAACCGCGCTGAAAAGACCATTGCTAGGTGGTAAGGGCCGGCTCAACTAGCTCGAGGTGTTATTAATTTGGTGTTCAACACAAAGCAAAGGTGGTGGTTCGGGTATTGACTCAGGGTACTAATATCAGTTGGTTCATGAATGAATCAGCTTTTGGGTGAAAATTTTCAATTTGGACAAGTTGTGTGACAGAATTATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g091630.2.1SL2.50ch01:85221770..85226691822-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g091630.2SL2.50ch01:85221417..852268925,476-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g091630.2.1.1SL2.50ch01:85226488..85226892405-n/a
exonexon:Solyc01g091630.2.1.2SL2.50ch01:85226190..85226410221-1
exonexon:Solyc01g091630.2.1.3SL2.50ch01:85225975..85226092118-n/a
exonexon:Solyc01g091630.2.1.4SL2.50ch01:85225198..85225881684-n/a
exonexon:Solyc01g091630.2.1.5SL2.50ch01:85224974..85225075102-n/a
exonexon:Solyc01g091630.2.1.6SL2.50ch01:85224660..85224872213-n/a
exonexon:Solyc01g091630.2.1.7SL2.50ch01:85223101..85223275175-2
exonexon:Solyc01g091630.2.1.8SL2.50ch01:85222607..85222974368-n/a
exonexon:Solyc01g091630.2.1.9SL2.50ch01:85221417..85222151735-n/a
intronintron:Solyc01g091630.2.1.2SL2.50ch01:85226411..85226487n/a-n/a
intronintron:Solyc01g091630.2.1.3SL2.50ch01:85226093..85226189n/a-n/a
intronintron:Solyc01g091630.2.1.4SL2.50ch01:85225882..85225974n/a-n/a
intronintron:Solyc01g091630.2.1.5SL2.50ch01:85225076..85225197n/a-n/a
intronintron:Solyc01g091630.2.1.6SL2.50ch01:85224873..85224973n/a-n/a
intronintron:Solyc01g091630.2.1.7SL2.50ch01:85223276..85224659n/a-n/a
intronintron:Solyc01g091630.2.1.8SL2.50ch01:85222975..85223100n/a-n/a
intronintron:Solyc01g091630.2.1.9SL2.50ch01:85222152..85222606n/a-n/a
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Related viewsNone found
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