Solanum lycopersicum mRNA Solyc01g091620.2.1
 mRNA details
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| Name | Type |
Length
2,037
|
Organism |
|
Description
Glycogen synthase kinase (AHRD V1 **** C7AE95_SOYBN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
|
|
Location(s)
SL2.50ch01:85197219..85201424
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0006468
- Length
- 4206
- Nb exon
- 13
- Sifter term
- GO:0004696
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc01g091620.2.1 Glycogen synthase kinase (AHRD V1 **** C7AE95_SOYBN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
GGATTTATTTTTATTTTTATGATAAAAGGAGAGGAGAGAGAGTGGGAAGAGGCTTTATGTTGTCATATTTTCTCAATTTGGCATTTCAAAGTCTAATTTCTCTATCTTGTTTGTTTTTCTCTCTTTCTCTCTCCCTCCTCCATCTTCACCATTGAAGAAAAATACTTTTCAGGTGTTTGAGGAAGAAGAGAAGGACTTATCAATTACTCTCGAAAAATTTTCAAGGACCGCTCAGAGGGGTTTTTCTTTTGGGCTCTTGGCGAAGCAGAGATGAATGTCATGCGTCGCCTTAAGAGCATTGCTTCTGGACGTTCTTCTGTTTCAGATCCTGGTGGTGATTCAAGCATAAAGAGGGTGAAGGTTGAGAAAGAAGTAGATCAAAGAGTGGTTGGTGAAACTCAAATGGAAGAGGGATGTACAACTACTACAGTTCCAAAGGAAGACATGGCTTCTACATCTATGGAAACCACTGCTGGAAGTACCTCAACAATGGATATTAGACTTGAAAATTCTGAACTTGATGAACTTCCTAAAGAAATGCATGAAATGAAAATTAAGGATGAAAAAGATGATAAAGCTGATAGTCTAGATGATAATTTGAAGGATATGGAACCTGCTGTTGTTAGTGGAAATGGAACAGAAACTGGTCAGATTATTGTGACTACTGTGAGTGGTAGGAATGGACAAGAGAAACAGACATTGTCTTACATGGCGGAGCGCGTGGTTGGCACTGGTTCATTTGGAGTTGTCTTTCAGGCTAAGTGCTTGGAAACTGGTGAATCTGTTGCAATAAAGAAGGTCTTACAGGATAGGAGATACAAGAACAGGGAACTTCAGATTATGCGCACACTTGATCATCCTAATGTTGTTAAACTACGACACTGCTTCTATTCTACTACTGAGAAGAATGAAGTCTACCTTAACCTTGTCCTGGAATACGTGTCTGAAACTGTTTACCGAGTATCAAGGCACTACAGCAGAATGAACCAACACATGCCCAATATATATGTGCAGCTATACACATACCAGATATGCCGTGCTCTGAATTACATGCATGGTGTCCTTGGTGTATGCCATCGTGATATTAAACCACAGAATCTTTTGGTTAATCCCCACTCGCATCAGCTAAAGCTCTGTGATTTTGGTAGTGCAAAGATGTTGGTGCCTGGAGAGCCCAACATATCATACATTTGTTCTCGTTATTATCGGGCTCCTGAATTGATCTTTGGTGCTACTGAGTACACAACTGCAATTGACATGTGGTCTGCTGGTTGCGTTATGGCTGAGCTACTTTTGGGACAGCCTCTTTTCCCTGGAGAAAGTGGCGTTGATCAGCTGGTCGAAATCATCAAGATATTGGGGACACCAACAAGAGAGGAGATTAGGTGCATGAATCCAAATTACACAGAGTTCAAGTTTCCCCAGATCAAAGCTCACCCATGGCACAAGATATTTCATAAAAGAATGCCCCCTGAAGCAGTTGATTTGGTGTCGAGGCTTCTCCAATATTCTCCAACTCTACGCTGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATTCTTTAAGGGAACCAAATGCTTGCTTGCCAAATGGGCGACCTCTGCCTCCCCTATTCAACTTTTCACCTCAAGAGCTCTCTGGCGTGCCTGCTGAACTGCGAAAGCGCCTTATTCCTGAACACTTGCGCAAGTGAATTTTGTGAAGACAGTTGCTTAGGCTTTGTAAATGGGTTTTTCTTGAGAGGTGTAGTTGCCCAATCAGCGTTATGTTGCTCCAGCAAATGCAGCTGCTTTCTTGGCCTTAGTAATATTTGATGGAATACAACATCATAACATGGGAGCTAGTTACTTGCTAGTTGGTTTCGGATGACGGATATGACAGTAAGATTTGCGGGTGATTTATCGCAGTGTCTCTCGTCTTTATAAACATATTATGTTCAGTACCCCAGTAGTTTTAGATGAGAGTTTTCATCTGTTAATTTATACCTTTTAGCAAGCAATATCTAGTTTGAGGGGTATTCATAAGATTAATG
GGATTTATTTTTATTTTTATGATAAAAGGAGAGGAGAGAGAGTGGGAAGAGGCTTTATGTTGTCATATTTTCTCAATTTGGCATTTCAAAGTCTAATTTCTCTATCTTGTTTGTTTTTCTCTCTTTCTCTCTCCCTCCTCCATCTTCACCATTGAAGAAAAATACTTTTCAGGTGTTTGAGGAAGAAGAGAAGGACTTATCAATTACTCTCGAAAAATTTTCAAGGACCGCTCAGAGGGGTTTTTCTTTTGGGCTCTTGGCGAAGCAGAGATGAATGTCATGCGTCGCCTTAAGAGCATTGCTTCTGGACGTTCTTCTGTTTCAGATCCTGGTGGTGATTCAAGCATAAAGAGGGTGAAGGTTGAGAAAGAAGTAGATCAAAGAGTGGTTGGTGAAACTCAAATGGAAGAGGGATGTACAACTACTACAGTTCCAAAGGAAGACATGGCTTCTACATCTATGGAAACCACTGCTGGAAGTACCTCAACAATGGATATTAGACTTGAAAATTCTGAACTTGATGAACTTCCTAAAGAAATGCATGAAATGAAAATTAAGGATGAAAAAGATGATAAAGCTGATAGTCTAGATGATAATTTGAAGGATATGGAACCTGCTGTTGTTAGTGGAAATGGAACAGAAACTGGTCAGATTATTGTGACTACTGTGAGTGGTAGGAATGGACAAGAGAAACAGACATTGTCTTACATGGCGGAGCGCGTGGTTGGCACTGGTTCATTTGGAGTTGTCTTTCAGGCTAAGTGCTTGGAAACTGGTGAATCTGTTGCAATAAAGAAGGTCTTACAGGATAGGAGATACAAGAACAGGGAACTTCAGATTATGCGCACACTTGATCATCCTAATGTTGTTAAACTACGACACTGCTTCTATTCTACTACTGAGAAGAATGAAGTCTACCTTAACCTTGTCCTGGAATACGTGTCTGAAACTGTTTACCGAGTATCAAGGCACTACAGCAGAATGAACCAACACATGCCCAATATATATGTGCAGCTATACACATACCAGATATGCCGTGCTCTGAATTACATGCATGGTGTCCTTGGTGTATGCCATCGTGATATTAAACCACAGAATCTTTTGGTTAATCCCCACTCGCATCAGCTAAAGCTCTGTGATTTTGGTAGTGCAAAGATGTTGGTGCCTGGAGAGCCCAACATATCATACATTTGTTCTCGTTATTATCGGGCTCCTGAATTGATCTTTGGTGCTACTGAGTACACAACTGCAATTGACATGTGGTCTGCTGGTTGCGTTATGGCTGAGCTACTTTTGGGACAGCCTCTTTTCCCTGGAGAAAGTGGCGTTGATCAGCTGGTCGAAATCATCAAGATATTGGGGACACCAACAAGAGAGGAGATTAGGTGCATGAATCCAAATTACACAGAGTTCAAGTTTCCCCAGATCAAAGCTCACCCATGGCACAAGATATTTCATAAAAGAATGCCCCCTGAAGCAGTTGATTTGGTGTCGAGGCTTCTCCAATATTCTCCAACTCTACGCTGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATTCTTTAAGGGAACCAAATGCTTGCTTGCCAAATGGGCGACCTCTGCCTCCCCTATTCAACTTTTCACCTCAAGAGCTCTCTGGCGTGCCTGCTGAACTGCGAAAGCGCCTTATTCCTGAACACTTGCGCAAGTGAATTTTGTGAAGACAGTTGCTTAGGCTTTGTAAATGGGTTTTTCTTGAGAGGTGTAGTTGCCCAATCAGCGTTATGTTGCTCCAGCAAATGCAGCTGCTTTCTTGGCCTTAGTAATATTTGATGGAATACAACATCATAACATGGGAGCTAGTTACTTGCTAGTTGGTTTCGGATGACGGATATGACAGTAAGATTTGCGGGTGATTTATCGCAGTGTCTCTCGTCTTTATAAACATATTATGTTCAGTACCCCAGTAGTTTTAGATGAGAGTTTTCATCTGTTAATTTATACCTTTTAGCAAGCAATATCTAGTTTGAGGGGTATTCATAAGATTAATG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc01g091620.2.1 | SL2.50ch01:85197557..85201154 | 476 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc01g091620.2 | SL2.50ch01:85197219..85201424 | 4,206 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc01g091620.2.1.1 | SL2.50ch01:85201095..85201424 | 330 | - | n/a |
| exon | exon:Solyc01g091620.2.1.10 | SL2.50ch01:85198229..85198324 | 96 | - | n/a |
| exon | exon:Solyc01g091620.2.1.11 | SL2.50ch01:85197981..85198064 | 84 | - | n/a |
| exon | exon:Solyc01g091620.2.1.12 | SL2.50ch01:85197694..85197796 | 103 | - | 2 |
| exon | exon:Solyc01g091620.2.1.13 | SL2.50ch01:85197219..85197619 | 401 | - | n/a |
| exon | exon:Solyc01g091620.2.1.2 | SL2.50ch01:85200170..85200442 | 273 | - | n/a |
| exon | exon:Solyc01g091620.2.1.3 | SL2.50ch01:85199975..85200067 | 93 | - | n/a |
| exon | exon:Solyc01g091620.2.1.4 | SL2.50ch01:85199814..85199873 | 60 | - | n/a |
| exon | exon:Solyc01g091620.2.1.5 | SL2.50ch01:85199429..85199701 | 273 | - | n/a |
| exon | exon:Solyc01g091620.2.1.6 | SL2.50ch01:85199218..85199292 | 75 | - | n/a |
| exon | exon:Solyc01g091620.2.1.7 | SL2.50ch01:85198987..85199043 | 57 | - | n/a |
| exon | exon:Solyc01g091620.2.1.8 | SL2.50ch01:85198759..85198899 | 141 | - | n/a |
| exon | exon:Solyc01g091620.2.1.9 | SL2.50ch01:85198431..85198481 | 51 | - | n/a |
| intron | intron:Solyc01g091620.2.1.10 | SL2.50ch01:85198325..85198430 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.11 | SL2.50ch01:85198065..85198228 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.12 | SL2.50ch01:85197797..85197980 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.13 | SL2.50ch01:85197620..85197693 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.2 | SL2.50ch01:85200443..85201094 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.3 | SL2.50ch01:85200068..85200169 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.4 | SL2.50ch01:85199874..85199974 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.5 | SL2.50ch01:85199702..85199813 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.6 | SL2.50ch01:85199293..85199428 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.7 | SL2.50ch01:85199044..85199217 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.8 | SL2.50ch01:85198900..85198986 | n/a | - | n/a |
| intron | intron:Solyc01g091620.2.1.9 | SL2.50ch01:85198482..85198758 | n/a | - | n/a |
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