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Solanum lycopersicum mRNA Solyc01g091170.2.1

mRNA details  
Name
Solyc01g091170.2.1
Type
mRNA
Length
1,405
Organism
Solanum lycopersicum
Description
Agmatinase (AHRD V1 ***- Q1IPT1_ACIBL); contains Interpro domain(s) IPR016160 Aldehyde dehydrogenase, conserved site IPR006035 Ureohydrolase
Location(s)
SL2.50ch01:84863098..84865316
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0046872
  • GO:0055114
Length
2219
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g091170.2.1 Agmatinase (AHRD V1 ***- Q1IPT1_ACIBL); contains Interpro domain(s) IPR016160 Aldehyde dehydrogenase, conserved site IPR006035 Ureohydrolase

CGCTGTAATCAATTCCATTACTACTGAAAAGGAAGTTCTTAGCTCTATTTAACTTCAATTGCCTTTTTTTTTTTCTCTCAATCACACTTAACACTGCTTCATTTCTTGTAGTAAACAAATATGAAGAGTGCTGGAAGTATGGGAATCAACTATATGCAGAAATTGCTAACGTCAAATGTTCCAAAAGAAGTAGTCAAAAGAGGACAGGATCGTGTTGTAGAGGCATCTCTTACACTTATTCGTGAAAGAGCAAAACTTAAGGGAGAGCTTGTTCGTGGACTTGGAGGTGCAGTAGCGTCAACGTCACTTCTTGGAATTCCTCTGGGACACAACTCTTCATTTCTCCAGGGCCCTGCATTTGCTCCTCCTCTTATACGAGAGGCTATTTGGTGTGGCAGTACAAACTCCACAACTGAGGAAGGAAAAATATTAGATGATCAACGTGTCTTAACTGATGTTGGTGATCTGCCAGTACAAGAGTTACGAGACACAGGCATAGATGACGATAGGTTGATGAGTACAGTAAGTGAATCTGTCAAGCTAGTTATGGACGAGAATCCATTGCGCCCCTTGGTGTTAGGGGGTGATCACTCTATATCCTATCCTGTTGTAAGAGCTGTGTCTGAAAAGCTTGGAGGACCTGTTGATATCCTTCACCTTGATGCTCATCCTGACATTTATGATGCATTTGAAGGAAACAAATACTCACATGCATCAAGCTTTGCACGAATAATGGAGGGTGGTTATGCTCGACGCCTTTTGCAAGTTGGAATTAGATCAATTAATCTAGAAGGTCGAGAACAAGGAAAAAGGTTTGGTGTGGAGCAATATGAAATGCGAACATTTTCCAGAGACAGACAATTTTTGGAGAATCTGAAACTTGGTGAAGGTGTAAAGGGCGTGTATATATCCGTGGATGTTGACTGTTTGGATCCAGCATTTGCTCCTGGAGTATCTCATTTTGAGTCAGGCGGTCTCTCGTTCCGCGATGTTCTAAACATACTGCATAACCTTCAAGGTGATATCGTTGGTGCTGATGTCGTTGAGTACAACCCACAGCGTGATACTGCTGATGGCATGACTGCAATGGTTGCTGCGAAGCTGGTAAGAGAACTTGCTGCCAAGATGTCCAAGTGACCTGCAGTAATTTTCAATTTTAACAAGCAAGAAGTACCATGTATCCTATTAGTGTACTCATCTTTATGCGAAAATAAGTGTTTATTCACATTAGGTAGGTCTGGCAGATGCTCAGTTTCCTATGGCAAGGGGGATTGGGATTATCTGTAAACTTGCCTCCCAAAATAAGCTAGTATATTTGCAGTTCCTTATGAGTAACCTGTTGTTGTAAGTGACACTTGTATCATTTGGTATGGAGTTTGTTGTGTATGGATGTTTTGAATCTTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g091170.2.1SL2.50ch01:84863318..84865048339+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g091170.2SL2.50ch01:84863098..848653162,219+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g091170.2.1.1SL2.50ch01:84863098..84863206109+n/a
exonexon:Solyc01g091170.2.1.2SL2.50ch01:84863308..84863459152+n/a
exonexon:Solyc01g091170.2.1.3SL2.50ch01:84863596..84863755160+n/a
exonexon:Solyc01g091170.2.1.4SL2.50ch01:84864018..84864151134+n/a
exonexon:Solyc01g091170.2.1.5SL2.50ch01:84864275..84864484210+2
exonexon:Solyc01g091170.2.1.6SL2.50ch01:84864562..84864672111+n/a
exonexon:Solyc01g091170.2.1.7SL2.50ch01:84864788..84865316529+n/a
intronintron:Solyc01g091170.2.1.1SL2.50ch01:84863207..84863307n/a+n/a
intronintron:Solyc01g091170.2.1.2SL2.50ch01:84863460..84863595n/a+n/a
intronintron:Solyc01g091170.2.1.3SL2.50ch01:84863756..84864017n/a+n/a
intronintron:Solyc01g091170.2.1.4SL2.50ch01:84864152..84864274n/a+n/a
intronintron:Solyc01g091170.2.1.5SL2.50ch01:84864485..84864561n/a+n/a
intronintron:Solyc01g091170.2.1.6SL2.50ch01:84864673..84864787n/a+n/a
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Related viewsNone found
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