Solanum lycopersicum mRNA Solyc01g088400.2.1

mRNA details  
Name
Solyc01g088400.2.1
Type
mRNA
Length
2,008
Organism
Solanum lycopersicum
Description
CER1 (AHRD V1 **-- B6TFH3_MAIZE); contains Interpro domain(s) IPR006694 Fatty acid hydroxylase
Location(s)
SL2.50ch01:83203223..83207682
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005783
Length
4460
Nb exon
10
Sifter term
GO:0009924
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g088400.2.1 CER1 (AHRD V1 **-- B6TFH3_MAIZE); contains Interpro domain(s) IPR006694 Fatty acid hydroxylase

AGAGTAAGAAAACATACTAAAAGCTTAATTTGCTTAAGGATGGCTTCTAAACCTGGCATTCTCACTGAATGGCCTTGGACTTTCCTTGGAAACTTCAAGTACTTGGTATTGGCACCATTTGTGTGTCATAGCACATACACATATTTTATGAGCAAAGATGAAAGGCAGAGGGACATTGTATACATAATCATTCTCCCACTTCTATTCTCGAGAATCATTCACAACCAGATATGGATATCCCTATCCAGATACAGAACTGCAAAGGGTAATAATCGAATCGTCGATAAGAGCATCGAGTTTGATCAAGTTGACAGAGAGAGCAACTGGGATGATCAGATCATATTTAATGGACTGTTATATTATATTGGATACCTGATGCTGGAACAAGCTCATCACCTGCCTTTGTGGAGAAGTGATGGGATCATTATAATTGGCTTGCTTCATAGTGGTCCAGTGGAGTTCCTTTATTATTGGCTTCATAGAGCTCTGCATCATCATTTTCTCTACTCTCGTTATCATTCTCATCATCACTCCTCTATTGCTACTGAGCCTATCACTTCTGTGATTCATCCATTTGCTGAGCATTTATCCTATTTTACACTCTTTTCCATACCCTTGTTCACAACTGTTTTCACTAGGACTGCTTCTATAGCTTCATTTGGTGCTTATGTTACCTATATTGATTTCATGAACAACATGGGGCATTGCAATTTTGAGCTTATTCCTAAGTGGATGTTCTCTGTATTTCCCCCTCTCAAGTACTTCATGTATACGCCCTCGTACCATTCACTACATCACACTCAATTCAGGACAAATTATTCTCTTTTCATGCCAATGTATGACTACATCTACGATACATTGGACAAGTCCTCAGACACACTGTATGAAAAGTCACTTGAAAGAGAAGCTGAAGTGCCTGATGTGGTGCACCTAACGCATCTAACGACTCCAGAATCCATTTACCATCTTCGACTAGGATTTGCATCGTTGGCCTCGAACCCTCACACCTCTAGGTGGTATGTTTGGTTAATGTGGCCTGTCACACTATGGTCAATAATGATTACTTGGATTTATGGTCGTACATTTGTTGTTGAGAGAAATATCTTCAAGAATATCAAATTACAAACTTGGGCTATCCCAAAATATCGCGTACAATACTTCATGAAATGGCAAAGAGAGACTATCAACAAGTTGATTGAGGAATCCATTATGGAGGCAGATAACAAAGGGATAAAAGTTTTAAGCCTTGGACTCTTAAATCAGGAAGAGACGTTGAATAGTAATGGTGAACTTTACCTAAAAAGGCATCCTCAGTTGAAAGTGAAGGTGGTTGATGGAAGTAGCCTAGCTGTGGCCGTGGTTCTCAACTCCATTCCTAAAGGAACTTCTCAAGTTGTCCTTCGAGGTCGTTTGTCCAAAGTTGCTTACTCCATTGCCCTTGCCTTGTGCCAAAGAGGAATTCAGGTTGCCACGTTAGACGAAGAAGACTACAAGAGACTTAATGCAAAGCTTACTCATGAAGCTGCAACTAACTTGGTCCTGTCGAAATCTTTTGTTTCAAAGACATGGCTAGTAGGGGACGGATTGAGTGAAGATGAACAATTGAAAGCGCCAAAAGGAACATTATTCATTCCTTATTCACAATTCCCACCAAGAAAATCTCGCAAGGATTGCTTCTACTTCAACACACCAGCTATGATTGCTCCTAAACATCTTGAAAATGTGGACTCTTGTGAGAATTGGCTTCCAAGAAGAGTGATGAGTGCGTGGAGAATAGCTGGGATTTTGCATGCATTGGAAGGCTGGAACGAGAATGAGTGTGGTGACATGATGTTTGATATTGAAAAAGCATGGAAAGCTAGTGTTGATCATGGTTTTCGCCCGTTAACATTAGTGGCTACTTCTACGGATCAATCCAAGAACTAGAAGTATAGATTAATGTCTTTGTTATAAGTATTATATATATATATATATATATATATATATATATATATATTGGATCAGCTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g088400.2.1SL2.50ch01:83203261..83207600629+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g088400.2SL2.50ch01:83203223..832076824,460+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g088400.2.1.1SL2.50ch01:83203223..8320332199+n/a
exonexon:Solyc01g088400.2.1.10SL2.50ch01:83207412..83207682271+n/a
exonexon:Solyc01g088400.2.1.2SL2.50ch01:83203424..83203650227+n/a
exonexon:Solyc01g088400.2.1.3SL2.50ch01:83204744..83204976233+n/a
exonexon:Solyc01g088400.2.1.4SL2.50ch01:83205388..83205607220+1
exonexon:Solyc01g088400.2.1.5SL2.50ch01:83205953..83206328376+2
exonexon:Solyc01g088400.2.1.6SL2.50ch01:83206396..83206503108+1
exonexon:Solyc01g088400.2.1.7SL2.50ch01:83206642..83206842201+n/a
exonexon:Solyc01g088400.2.1.8SL2.50ch01:83206927..8320702599+n/a
exonexon:Solyc01g088400.2.1.9SL2.50ch01:83207143..83207316174+n/a
intronintron:Solyc01g088400.2.1.1SL2.50ch01:83203322..83203423n/a+n/a
intronintron:Solyc01g088400.2.1.2SL2.50ch01:83203651..83204743n/a+n/a
intronintron:Solyc01g088400.2.1.3SL2.50ch01:83204977..83205387n/a+n/a
intronintron:Solyc01g088400.2.1.4SL2.50ch01:83205608..83205952n/a+n/a
intronintron:Solyc01g088400.2.1.5SL2.50ch01:83206329..83206395n/a+n/a
intronintron:Solyc01g088400.2.1.6SL2.50ch01:83206504..83206641n/a+n/a
intronintron:Solyc01g088400.2.1.7SL2.50ch01:83206843..83206926n/a+n/a
intronintron:Solyc01g088400.2.1.8SL2.50ch01:83207026..83207142n/a+n/a
intronintron:Solyc01g088400.2.1.9SL2.50ch01:83207317..83207411n/a+n/a
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Related viewsNone found
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