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Solanum lycopersicum mRNA Solyc01g088250.2.1

mRNA details  
Name
Solyc01g088250.2.1
Type
mRNA
Length
2,011
Organism
Solanum lycopersicum
Description
IQ-domain 11 (AHRD V1 ***- D7M5A6_ARALY); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region
Location(s)
SL2.50ch01:83063869..83066606
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
2738
Nb exon
5
Sifter term
GO:0005516
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g088250.2.1 IQ-domain 11 (AHRD V1 ***- D7M5A6_ARALY); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region

GACTTCATTTATTTATTTTTCTTTGGTGGGACTTTTAAGGCTAGAGTCCTAGTAGTTAAGTAGAGTTGCTTACTTGAGAAGATTTTGGTTATTTTTAGAAATGAATGTGTGGAAAATCTATGATATCTTTTTGGTGTTAAATGCCTACTAATCTTAGTAAATTATCATAAAAAAAATAAATATGCTTCAATTCCCAAAGGCTCTGTTACCAATAGATCCTCTATTTTAACAAGAAACTTCCCTTTTTGTATCCTTATGTTTAAATTACTCCCAAAAAGATTTTGTTGCTTCATCCAAGTGTCATTCTTTGTTTAAATTACTCACATGAGGCAGTTCTAAAATTCATGGCAAAGAAGAAGAGCTGGTTCAACTTGCTTAAGACATTTTTCGTTTCAGGATCTGAATCAAGATTAGACAAGGGGAAAAGAAAAAGATGGGTATTTACAAGGCTAAAGATTAGAAGATTGGTGGCGACCTCGGCGTTGTCACCACCAAGAGAAAGGAGACAACAGAAAACAGAAGAGAAGCAGAACAAGCATGCTATAAATGTAGATGTTGAAACGATTAATGAATCGAATGTAGATGCTGAAAATGCAAAAGTTTATTTTAAAGAAGACATTGAGTCTATCCATGAGCCAAATAATGAAACTCTTGTATTGTCAAAACTGACAATTCATGGTGAAGAAACAAAATACTTTTACCTCTATGAGAGAAGGATTGAAAATCTTGCTGCCATCAAAATTCAGACAGCATTTCGTGGTTATCTTGCAAGGAAAGCTTTGAGAGCACTAAAGGGACTAGTGAGGCTTCAAGCTATTGTTCGTGGTAGGGCTGTTCGACGTCAGGCTATTGCTACACTTAGGTCCTTGCAGTCAATTGTAAACATTCAATCTGAAGTATGTGCAAAGAGATGTGATAATCAGGTGAAAAGCACAGTACATTGTCAAGAGAAAACGTTGATGGATCTCGGAGAGAAAGATATCAAGATTGATCTAAACAGCCAGAAAAGGTGGGACAATCGATATTTATCTAAGGAAGAAGCAAACAAGATGTTCTCAAGCAAAAGGGAGGCTGCGATCAAGAGAGAACGTATAAGAGAATACTGGTTAAGCCATCGAAGATCAACAGAATCAGACATAAATGGAAGAAGGCGATACTGGTTAGAACAATGGGTAGATGCTCAGCTGGCTAAAAGAGATGACCTTAAAAACGTGGACACGCTTTTCTCAGCAAGAAACAGAGAAGAATTCGAGAGAAAAGAAATGAAGCCAAAGCCTTCTCTAAGACAATACCATACAGATCAAGAATTGGTTTCGCCAGTATATGTTCCAAGAAGATCATTTCACCACAGAAGACAGAAATCAACTGGGGATCATGACAATACTTTCATGGGATCTCCTTCAATTCCAACTTACATGGCAGCCACGGAATCTGCAAAAGCAAAAGCAAGATCAATGAGTTCACCAAGGCTAAGACCAATCAATACTGATGTCTACTCTGAGATCAATTCTCCCTACAAGTACAAACTATCTCCCATATCTTCTATCAACAGCGATGCCACGGTCACAAGTAGAATGGGAAGTGTTCCTGGCTTCTCACAAAGATCACCATGCTTAAAAGGAACACCTGGTCCCATAAAATCAACAAGGAGCATTAAGGACCTTAGCTTTGGATCAGATGGAGCATTTGCAAATTGGGATCGTATCGGCGCCTGCAGGTGATCGATTGACTAAATTGAAAAATATAGATTGTAATGTAAAAGTTGGAATGGTTTCATAATATCATATCTACACTAATAGTTTGTGTGAGTTTCCATCAGTTTCGTCTGAATAAATCTCTTACTCAAGATATGCTACAAATTGAAGTTATGCAACTAGGGGTGACAAGGGGGTTGATGTGGGTGCGGGGAGGGTTCAAGTTATTATTCTTTGCAAAATCATGCGGTTGTGGGTTAAGGAAGTCGTAGTCTGCCAAGTAGATTGATCAGATGTTTATAGCGGAATAGTAAGGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g088250.2.1SL2.50ch01:83064212..83066316459+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g088250.2SL2.50ch01:83063869..830666062,738+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g088250.2.1.1SL2.50ch01:83063869..83064287419+n/a
exonexon:Solyc01g088250.2.1.2SL2.50ch01:83064574..83064921348+n/a
exonexon:Solyc01g088250.2.1.3SL2.50ch01:83065004..83065222219+n/a
exonexon:Solyc01g088250.2.1.4SL2.50ch01:83065489..83065620132+n/a
exonexon:Solyc01g088250.2.1.5SL2.50ch01:83065714..83066606893+n/a
intronintron:Solyc01g088250.2.1.1SL2.50ch01:83064288..83064573n/a+n/a
intronintron:Solyc01g088250.2.1.2SL2.50ch01:83064922..83065003n/a+n/a
intronintron:Solyc01g088250.2.1.3SL2.50ch01:83065223..83065488n/a+n/a
intronintron:Solyc01g088250.2.1.4SL2.50ch01:83065621..83065713n/a+n/a
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Related viewsNone found
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