Solanum lycopersicum mRNA Solyc01g088170.2.1

mRNA details  
Name
Solyc01g088170.2.1
Type
mRNA
Length
4,644
Organism
Solanum lycopersicum
Description
Aldehyde oxidase (AHRD V1 ***- Q9FV24_SOLLC); contains Interpro domain(s) IPR002346 Molybdopterin dehydrogenase, FAD-binding
Location(s)
SL2.50ch01:83032041..83041938
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0009055
  • GO:0051536
  • GO:0055114
  • GO:0050660
Length
9898
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g088170.2.1 Aldehyde oxidase (AHRD V1 ***- Q9FV24_SOLLC); contains Interpro domain(s) IPR002346 Molybdopterin dehydrogenase, FAD-binding

CAGCTAGCAAAGAATCTTGATCTCAGAAGTTCTTTGTGCTAAAAAGTAAGTATTTGGACACCCAATTCAAGTTCAAGATTCTTGATTTTTCTGTCAGTTCTGTTATTTTCCACCTGAGGAAGTAGAAAAGAAGTTGAAAAAGATTAAGTTTTTGAGACAGGGTTTGACTAAAGTTAAGTGTTTCAGCTAACCAAGAATCTTGATTTAAGAAGCTTTTTGTGTTGAACAGTAAATATTTGGAGACCAAAATCAATTCAAGGTTCATGCTTTTTCTTTCAGTTGGGATATTGTTCAGCTCAGGAAGTAGAAAAAAGATAAGATTTTGATAAAGGGACTATGTGAAAGGGGCTATTATATTAATGGAGGAAAGACAGAAAAAAGGGGGTTCATTGGTTTTTGCAGTTAATGGAGAGAGGTTTGAGTTGCCATGTGTTGATCCTTCTACAACTTTGCTTCAGTTCTTGCGCTCTCAGACTTTTTTCAAGAGTCCTAAACTTGGTTGTGGTGAAGGTGGTTGTGGGGCTTGTGTTGTTCTGGTATCGAAGTATGATCCAAAGCTTAAAAAGGTTGAAGATTTTAGCGTAAGTTCATGCCTTACACTTCTTTGCAGTTTAAATGGTTTTTCAATTACTACAAGTGAAGGTCTTGGGAACACCAGAGATGGTTTCCACTCTATTCATGAAAGGATTGCCGGTTTCCATGCTTCTCAATGCGGCTTTTGCACTCCCGGCATGTGTATGTCATTTTTCTCCGCTCTTGTCAATGCCGATAAAGGAAACAAGCCAGATCCTCCACCGGGATTCTCTAAGCTTACTTCGTCCGAAGCTGAAAAGGCAATAGAAGGAAACCTTTGTCGGTGCACTGGATACCGGCCCATTGCTGATGCCTGCAAGACTTTTGCTGCTGATATTGATATAGAGGATTTAGGATTCAATGCTTTTTGGAAAAACGGAGATTCCAAGCAAATGAAAGTAAGTAAATTACCTCCCTATGATCCAACTAAGAACTTCAATACATATCCCGAGTTCTTGAAAAGTGAATCCACCACGAATTTAGACTCTTTAAGGTACTCTTGGTATACTCCTGTTTCCATTGAGGATCTACAGAGCTTGTTGAACTCCAACGTGACAGAAAATGGTGCAAGCTTTAAACTAGTCGTTGGTAATACTGGAACAGGTTATTATAAAGAAACTCAGCGATATGATCATTACATTGATCTAAGGTACATTCCCGAACTCTCGATCATCAAAAGAGATCAGGCAGGCATCGACATTGGATCAACTGTGACAATCTATAAACTCATTTCATTCCTGAAAGAGGAAAGTAAAATCAATTTCGGTTCATATGGGAAGTTGGTGTCCGATAAACTGGCTTACCACATGGAGAAGATTGCTTCACCATTTGTTAGAAATTCTGCTAGTGTGGGAGGAAATTTGGTTATGGCACAGAAGAATGGTTTTCCTTCAGATATAGCTACATTATTTCTTGGGCTTTGTGCTACTGTTAGCTTGATGACTCGTCATGGACTTGTAAAGCTCACATGGGAGGAGTTATTGTTGAAACCACCACTGGACTCGAGAATTGTGCTTCTAAGTGTTTCGATCCCATTTAAGAAAGATCAAAATTCTAAATTTTTATTTGAAACTTATCGAGCTGCTCCACGACCTCATGGAAATGCATTGGCATATGTTAATGCTGCTTTCCAGGCTGATGTTTCTCTCTGCCAGAACGGCTTCTTGATAAACTATATCCGGTTGGCATTTGGTGCTTATGGCACAAAACACGCAACAAGGGCTAAAATGATAGAGAGATATCTAACCGGGAAAATGTTAAACATACAAGTTTTATATGGAGCTCTTAAATTAGTCAAACTAGCAGTTGTACCAGAAGATGGCACTTCACATCCTGAGTACAGATCAAGCTTAGCTGTCAGTTATGTTTTTGAGTTCCTTTATCCCTTCACTGATGCTCATTCTGCCCTTTCTGGTGGTTTATTCAATGGAATTAATGATACCTCAGTCGAAAAGGTTTTGAAAAGTAGTAAAGATGGTTGCATTAGTCAGGGGAGAAAACAAACACTACTCTCTTCTGCTAAGCAGGTTGTGGAATCAAGTACCGAGTACTATCCAGTAGGTGAACCGATGAAGAAGGTCGGAGCTGCCATGCAAGCTGCTGGTGAAGCTGTTTATGTAGATGACATCCCTTCACCGCCAAACTGCCTGTATGGAGCATTTATATACAGTACGAAAGCATTAGCAGGTGTAAAGGGAATCCAGCTCGAATCGAATCAATTAACAGATGGAGTCGCCGCCGTTATTACTTTTAAAGATATCCCAATCGGAGGGGCAAATATAGGAGCTACTAGATTTTCTGATCCCGAGCCCTTATTTGCAGATGATCTCGTCCGATATGCTGGCGACAGAATTGCAATTGTGGTTGCTGACAGTCAGAGGTCTGCTGACGTGGCTGCAAGAACAGCCCTTGTTGAATACGACACTGCAAATGTAGATTCGCCCATTTTAACCGTTGAGGAAGCTGTTGAGAAATCTAGCTTTATCCAAATCCCGCCGTTTCTATATCCAAAACAGGTCGGTGATTTCTCGAAAGGAATGGCTGAAGCTGATCACAAGATTCTCTCAGCTGAGGTAAGACTTGGTTCTGAGTACTATTTTTATATGGAGACACAGACTGCTCTTGCAATTCCAGACGAAGACAACTGCATGGTTGTTTATACTTCAAGTCAGTGCCCTGAGAGCGCACATCGTGTGATTGCCACTTGTCTTGGTGTTCCTACACACAATATCCGTGTAATTACAAGAAGGGTCGGAGGTGGTTTTGGGGGCAAGGGAGTCAGAGCAATGCCTGTCTCCACAGCCTGTGCACTTGCAGCATACAAGTTAAGGCGACCTGTCAGGATATATGTCAACAGGAACACTGACATGATAATGACAGGAGGAAGACACCCAATGAAAGTAACATATAGTGTAGGATTCAAGTCGAGCGGAAAGATCACAGCATTACATCTTGATCTATTGATAAATGCTGGGATCTCAGAAGATGTAAGCCCTATCCTACCATTAAGTGTGATAAAAGCACTAAAGAAATATGATTGGGGTGCCCTATCTTTTGATGTAAAACTATGCAAGACAAATCTTACCAGCAAATCGACTATGCGGGGCCCTGGGGAGGTGCAAGGATCTTACATTGCTGAAGCTATAATCGAACATGTATCGAGTTCACTATTGTTGGAGGTGGACTTGGTCAGAAATAAAAATGCCCATACATTTGAAAGCCTCAATTTTTTCTATGGTAACATTGTATCGGTAGGAGAATATACACTGCCTAGTATCATGGATAAGTTGGCTGTGTCCTCGAGCTTTTTCAAACGAAGAGAGATGATCAAACAGTTTAACCAGAAAAATACATGGAAAAAAAGGGGTATTTCTCGAGTGCCAATCGTGCATGAAGTTTCGCAACGATCGACCCCGGGGAAAGTCAGTATTCTGCAAGATGGATCGATTGTTGTAGAGGTTGGAGGGATTGAAATTGGCCAAGGGCTATGGACAAAGGTGAAACAGATGACTGCCTATGCTCTTGGTTTAATTGAAAGTAGTTGGGCCGAAGACCTTGTGGAGAAAGTAAGAGTCATACAAGCAGACACCTTAAGCATAGTGCAAGGTGGGTTGACGGCAGGGAGCACTACATCGGAATCAAGCTGTGAAGCTGTTAGACTTTGCTGTAATGTCTTGGTTGAAAGACTGACTCCTTTGAAGAATCAGTTGCAGGAACAAAATGTCTCTGTTGACTGGCCAACACTGATTCGACAGGCACAAATGCAATCAGTACACTTAGCAGCACATTCTTATTATGTACCAGAATCTAGTTCCAAGAATTATTTGAACTTCGGCGCTGCTGTCAGTGAGGTGGAGATTGATATTTTGACTGGAGAGACTACTATTTTGCAATCGGATATTATTTATGACTGCGGGCAGAGCTTGAATCCAGCCATTGATTTGGGACAGATTGAAGGGGCATTTGTTCAAGGAATTGGATTTTTCATGCATGAAGAATATCTTACAAACGAAGACGGGTTAATGGTCTCAAATAGCACTTGGACGTACAAGATCCCGACTATTGACACCATACCTCAGAATTTCAATGTCCATGTGGTAAACAGTGGACATCACAAAAAGCGTGTTCTCTCGTCCAAAGCATCTGGTGAACCACCGTTGCTGCTGGCAGTTAGTGTCCATTGTGCAACACGAGCAGCGGTTAAAGCAGCACGTGAACAGCTCAAACAATGGGACAAGCTTGACGGGTCTGTTTCAGAATTCTATCTGGACGTCCCTGCCATATTACCTGTTGTGAAGACACAGTGTGGCCTGGATTATGTGGAGAAATACTTGGAAACTTTGGTGGCTCAGAAATCTAACTATACTTGCATCAACATGGATCTCAAATGATACTGAACTTAAAGAGTTGGTTTTTGTGGAGTCCATATCAAAACAGCAAATTCGCTATTTTGCTTCAAGTCACTATTTCTTTTTCCAATTTAATACGATTTACTATTTGATTCAATTTTCAATTCTACTATATTCAACCTCTAAATCAAAATAATATACCCCATTTAATTTTATTTGTTAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g088170.2.1SL2.50ch01:83032399..830417571,368+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g088170.2SL2.50ch01:83032041..830419389,898+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g088170.2.1.1SL2.50ch01:83032041..83032550510+n/a
exonexon:Solyc01g088170.2.1.10SL2.50ch01:83041507..83041938432+n/a
exonexon:Solyc01g088170.2.1.2SL2.50ch01:83033461..830351251,665+n/a
exonexon:Solyc01g088170.2.1.3SL2.50ch01:83036408..83036667260+2
exonexon:Solyc01g088170.2.1.4SL2.50ch01:83036777..83036986210+2
exonexon:Solyc01g088170.2.1.5SL2.50ch01:83037331..83037549219+n/a
exonexon:Solyc01g088170.2.1.6SL2.50ch01:83037685..83038647963+n/a
exonexon:Solyc01g088170.2.1.7SL2.50ch01:83040260..8304035596+n/a
exonexon:Solyc01g088170.2.1.8SL2.50ch01:83040825..8304092399+n/a
exonexon:Solyc01g088170.2.1.9SL2.50ch01:83041073..83041262190+n/a
intronintron:Solyc01g088170.2.1.1SL2.50ch01:83032551..83033460n/a+n/a
intronintron:Solyc01g088170.2.1.2SL2.50ch01:83035126..83036407n/a+n/a
intronintron:Solyc01g088170.2.1.3SL2.50ch01:83036668..83036776n/a+n/a
intronintron:Solyc01g088170.2.1.4SL2.50ch01:83036987..83037330n/a+n/a
intronintron:Solyc01g088170.2.1.5SL2.50ch01:83037550..83037684n/a+n/a
intronintron:Solyc01g088170.2.1.6SL2.50ch01:83038648..83040259n/a+n/a
intronintron:Solyc01g088170.2.1.7SL2.50ch01:83040356..83040824n/a+n/a
intronintron:Solyc01g088170.2.1.8SL2.50ch01:83040924..83041072n/a+n/a
intronintron:Solyc01g088170.2.1.9SL2.50ch01:83041263..83041506n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17687739%2Fdetails feature 17687739
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)