Solanum lycopersicum mRNA Solyc01g080810.2.1

mRNA details  
Name
Solyc01g080810.2.1
Type
mRNA
Length
3,610
Organism
Solanum lycopersicum
Description
Isoleucyl-tRNA synthetase (AHRD V1 ***- Q9FI67_ARATH); contains Interpro domain(s) IPR002301 Isoleucyl-tRNA synthetase, class Ia IPR018353 Isoleucyl-tRNA synthetase
Location(s)
SL2.50ch01:80090183..80113075
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005737
  • GO:0003824
Length
22893
Nb exon
22
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g080810.2.1 Isoleucyl-tRNA synthetase (AHRD V1 ***- Q9FI67_ARATH); contains Interpro domain(s) IPR002301 Isoleucyl-tRNA synthetase, class Ia IPR018353 Isoleucyl-tRNA synthetase

GTTGCCTAGTTCAGTTATCCACAAAGCAGAGACGCAGCTTGTTTTTCCCTCTTCTGTAGTCAAAGCAGCAGCAGCAGAAAGCTTCAAACTTTCAAATGAATGGAAGCCACTTTTTTTCCTAAACGCATCACTGCTTCGAAATCACTTGTCTTTGCCTTAGCTAGAGCCAAAATGGCAATGCAAACCTCTTCTTATAAGCTTTGGTCATTAAAGAGTTGCTCATCCTTAAGGGAACCCACTTCAGTTAGCCTGTTAAATTTAAGGAGTAGCTCTTCTGCTAGAGTTTTCTCTCTTATGAACATGACCCGCTACTCTACCTACTCCAATGATGATTCTTGTCCCTCTGGGAAGAGGAGGTCTCGTGGACCAGTAATGGCGGCCAAGAAGAGGTCTGAAGGGGCTAAGCAGGATGATGGGAAATACAAGGACACAGTTGATCTTCCAAAAACTGCCTTTGGCTTGCGAGCAAATTCCACAGTTAGGGAACCTGAACTTCAGAAAATATGGGATGACAACCAGGTTTTTAAAAGAGTTGTTGAGAGGAACAATGGGGGCACTTTCGTTCTGCATGATGGACCTCCTTATGCAAATGGTGACTTACACATGGGACATGCTCTGAATAAAATTTTGAAGGACATTATTAATCGTTATAAGCTTCTTCAAAACTTTAGAGTTCAGTATGTTCCAGGTTGGGATTGCCATGGCTTACCAATTGAATTAAAAGTGTTACAGTCACTAGACGATGATGCTAGAAAGGAGCTTACACCTCTAAAATTAAGAAACAAGGCAGCCAAATTTGCAAAATCAACTGTGCAGAGTCAGATGGCATCATTTAAGCGCTATGGAGTATGGGCTGACTGGGATCAGCACTATTTAACTCTTCACCCAGAATATGAAGCTGCACAGATTGAAGTATTTGGCCAGATGGCTATTCAAGGTTTTATATACAGAGGCAGGAAACCAGTTCATTGGAGTCCCTCATCTCGAACTGCACTTGCAGAGGCTGAACTAGAGTATAATGAGGAGCATGTGTCAAAAAGCATGTATGCTATTTTCAGACTAGTTGGTGTACCAGCTTCATGTGACTCATTGAAAGAATTCTTGCCCAATCTATGCTTGGCAATTTGGACAACAACTCCTTGGACAATACCAGCTAATGCTGCTGTAGCGGTAAATAATAAGCTTCAATATGCCGTTGTTGAAGTTTCCTCAGCCTCTGTAGACGGTTCTACATCTTCTGTTGATGGAAAGAAGAGGTTTGGAAATTTCATGAAGGGCGATAAAAGCCTACATCTTATTGTAGCTCTGGACCTTGTATCAACATTAGAATCAAAATGGGGTTTGAAGCTTACCTTGAAGAAAACAGTACTGGGTTCAGATCTTGAAAATTGCAGGTACACCCATCCTATAGATAGCCGGGAATGCCCCGTTGTCGTTGGTGGTGATTACATTACAACAGAGTCAGGAACTGGATTAGTTCATACTGCACCTGGTCATGGACAAGAAGATTATGTAACCGGCTTGAAATACGGTTTGCCTTTAGTTTCCCCTGTTGACGATGATGGGAAATTTACAGAAGAAGCTGGACAATTTAGGGGGCTTGATGTGCTTGGCAATGGCAATGTTGCTGTTATTGATTACTTGGATGAACACCTGTCATTGGTCATGGTAGAGCCATACAAACACAAATATCCTTATGACTGGAGAACAAAGAAGCCCACTATATTCAGGGCTACTGAACAATGGTTTGCATCAGTGGAAGGATTTCGTGATGCTGCAATGGATGCAATCAACCAAGTAACGTGGATTCCATCTCAGGCAGTAAACCGTATTTCTGCTATGACATCTGGCCGCTCTGATTGGTGTATATCACGTCAAAGGACATGGGGAGTCCCCATTCCAGTTTTTTACCACGTTGAATCAAAAGAGCCACTGATGAATGAAGAGACTATCGATCATATCAAATCTATTATTTCCCAAAAAGGAAGTGATGCATGGTGGTACATGGCAGTGGAGGAATTACTTCCTGAGAAATATCGCGATAAAGCATCAAACTATGAAAAAGGGACTGATACGATGGATGTCTGGTTTGACTCAGGTTCCTCGTGGGCTGCGGTGCTGGACAAAAGAGAAAGCCTTAATTACCCTGCAGATTTGTATCTCGAGGGGACAGATCAGCATCGTGGTTGGTTCCAGAGTTCCTTATTAACAAGTATTGCTACAAAAGGCCAGGCCCCTTATCACGGTGTTATTACACATGGATTTGTACTGGATGAGAGGGGGTTGAAAATGAGCAAATCTTTGGGAAATGTTGTTGATCCAAGGATGGTGATTGAGGGAGGGAAAAACCAAAAGGAAAACCCTCCATATAGTGCTGATGTCTTAAGGCTTTGGGTTTCAAGTGTAGACTATACTGGCGACATGCTAATTGGACCTCAAGTCCTTCGTCAAATGTCTGACATATACCGGAAATTGCGAGGAACACTCCGATTCCTTCTAGCAAATCTCCATGATTGGAAAGCTGATTATACAGTCCCGTATAGTGATCTTCCGATGATTGATCAGCATGCATTATTCCAGCTTGCTAATGTTGTGAACAACATTAGAGAGAGCTATGATAGTTATCAGTTTTTCAAAATATTTCAGGTGATTCAGCGGTTTGTGATAGTTGACCTCTCAAACTTCTATCTTGATGTCGCTAAGGATCGGCTTTATGTTGGGGGGAGTGCAAGTTTTACAAGGAGGAGTTGTCAAACAGTCCTTGAAGCCCATTTGCTTTCAATTGGAAGGATAATTGCTCCCATCTTACCCCATTTGGCCGAGGATATGTGGCAGCATCTTCCTTTTCAGTATACTGCTGAAGATGGGCATGTTGCTAAATTTGTTTTTGAGTCAAGATGGCCTGAACTAGATACAGAGTACCTTTCCTTTCCAGAGGAAGAAGTTGACTTTTGGGGAAAAATTCTTGAGCTAAGGACGGAAGTTAACAAAGCATTAGAGGTAGCTCGAAGTGGAAAATTGATTGGTTCCAGTTTAGAGGCCAAGGTGTATCTCCATTGTTCTAATGAAAGACTGGCTGAGAGACTAAACAACATGTGCGAACCTACAAATGAGGCAGATGCTTTACATCGCATATTCATAACATCTCAGGTGGAGATTCTCAACTCCTTGCAAGATGAAAGGATTAAAGATGTTCAGTACACGGGAGAATACCTCATGGAAGAAGGGGACAAAATCTGGGTTGGTGTATCTCGTGCAAATGGCTCGAAATGTGACAGATGCTGGAATTATTCACCTCAAGTAGGTTCTTTTACTGAGCATCCTTTGCTATGTGGCCGCTGCCACAACGTGGTTATCAGTCTACAAACTCGTGATCTTGATGATTTATCCAAGGTCACACAGAGTGAAGCAAAGGAGGCTATAGCACAATGAGAGAGAAAAAACACAGAGATATATATATATTTTTTTATAAGTTAGAATAGTATTATTTTTGTACATGCATTGATGAATAGAAAGATAGTGATTTAACTGGTATTGTGATGTTTTTTCGTAATCGATTTGATTCAGACCTTATTTAATATATCCAACAGTATATTACAGGATTATTTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g080810.2.1SL2.50ch01:80090281..801128971,111+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g080810.2SL2.50ch01:80090183..8011307522,893+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g080810.2.1.1SL2.50ch01:80090183..80090380198+n/a
exonexon:Solyc01g080810.2.1.10SL2.50ch01:80100250..80100481232+n/a
exonexon:Solyc01g080810.2.1.11SL2.50ch01:80101019..80101305287+2
exonexon:Solyc01g080810.2.1.12SL2.50ch01:80101437..80101573137+1
exonexon:Solyc01g080810.2.1.13SL2.50ch01:80101665..80101812148+2
exonexon:Solyc01g080810.2.1.14SL2.50ch01:80102353..80102484132+n/a
exonexon:Solyc01g080810.2.1.15SL2.50ch01:80104076..80104204129+2
exonexon:Solyc01g080810.2.1.16SL2.50ch01:80104736..80104863128+2
exonexon:Solyc01g080810.2.1.17SL2.50ch01:80104947..80105111165+2
exonexon:Solyc01g080810.2.1.18SL2.50ch01:80105417..80105542126+n/a
exonexon:Solyc01g080810.2.1.19SL2.50ch01:80108091..8010816474+n/a
exonexon:Solyc01g080810.2.1.2SL2.50ch01:80091028..80091226199+n/a
exonexon:Solyc01g080810.2.1.20SL2.50ch01:80111464..80111713250+n/a
exonexon:Solyc01g080810.2.1.21SL2.50ch01:80112083..80112262180+1
exonexon:Solyc01g080810.2.1.22SL2.50ch01:80112616..80113075460+n/a
exonexon:Solyc01g080810.2.1.3SL2.50ch01:80091378..80091532155+n/a
exonexon:Solyc01g080810.2.1.4SL2.50ch01:80091610..80091711102+2
exonexon:Solyc01g080810.2.1.5SL2.50ch01:80096386..8009645570+n/a
exonexon:Solyc01g080810.2.1.6SL2.50ch01:80097524..80097636113+n/a
exonexon:Solyc01g080810.2.1.7SL2.50ch01:80097746..8009781469+2
exonexon:Solyc01g080810.2.1.8SL2.50ch01:80098082..80098189108+n/a
exonexon:Solyc01g080810.2.1.9SL2.50ch01:80098947..80099094148+n/a
intronintron:Solyc01g080810.2.1.1SL2.50ch01:80090381..80091027n/a+n/a
intronintron:Solyc01g080810.2.1.10SL2.50ch01:80100482..80101018n/a+n/a
intronintron:Solyc01g080810.2.1.11SL2.50ch01:80101306..80101436n/a+n/a
intronintron:Solyc01g080810.2.1.12SL2.50ch01:80101574..80101664n/a+n/a
intronintron:Solyc01g080810.2.1.13SL2.50ch01:80101813..80102352n/a+n/a
intronintron:Solyc01g080810.2.1.14SL2.50ch01:80102485..80104075n/a+n/a
intronintron:Solyc01g080810.2.1.15SL2.50ch01:80104205..80104735n/a+n/a
intronintron:Solyc01g080810.2.1.16SL2.50ch01:80104864..80104946n/a+n/a
intronintron:Solyc01g080810.2.1.17SL2.50ch01:80105112..80105416n/a+n/a
intronintron:Solyc01g080810.2.1.18SL2.50ch01:80105543..80108090n/a+n/a
intronintron:Solyc01g080810.2.1.19SL2.50ch01:80108165..80111463n/a+n/a
intronintron:Solyc01g080810.2.1.2SL2.50ch01:80091227..80091377n/a+n/a
intronintron:Solyc01g080810.2.1.20SL2.50ch01:80111714..80112082n/a+n/a
intronintron:Solyc01g080810.2.1.21SL2.50ch01:80112263..80112615n/a+n/a
intronintron:Solyc01g080810.2.1.3SL2.50ch01:80091533..80091609n/a+n/a
intronintron:Solyc01g080810.2.1.4SL2.50ch01:80091712..80096385n/a+n/a
intronintron:Solyc01g080810.2.1.5SL2.50ch01:80096456..80097523n/a+n/a
intronintron:Solyc01g080810.2.1.6SL2.50ch01:80097637..80097745n/a+n/a
intronintron:Solyc01g080810.2.1.7SL2.50ch01:80097815..80098081n/a+n/a
intronintron:Solyc01g080810.2.1.8SL2.50ch01:80098190..80098946n/a+n/a
intronintron:Solyc01g080810.2.1.9SL2.50ch01:80099095..80100249n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17684849%2Fdetails feature 17684849
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