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Solanum lycopersicum mRNA Solyc01g068100.2.1

mRNA details  
Name
Solyc01g068100.2.1
Type
mRNA
Length
3,532
Organism
Solanum lycopersicum
Description
Squamosa promoter binding protein-like 1 (AHRD V1 *-*- Q56YT3_ARATH); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
Location(s)
SL2.50ch01:77195384..77202553
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
7170
Nb exon
10
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g068100.2.1 Squamosa promoter binding protein-like 1 (AHRD V1 *-*- Q56YT3_ARATH); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box

TGGTTTTCTCTTTGTACTCTTTCTCTACTTTTGGGGCCGTACAGAAGCTGATTAGTGCTCATCTTTCTTCTTTTTCTCTTTTCACATCGGTTTCCTCAATTATTGACTTCTGATCTGTAGCTAACACTTGTCCGATCGGAATCTTTTTTTTTCTTCTTCTTCTTGCTGAGAGACGTCTTTGGATTTGGATCTTAATACACATATACACATAGTACTTAAATGGAAGCGAGTGTGGGAGAGCGTTTTTATCATATGGGAGGAACGGATCTGCGGGGATTAGGGAAGAGGAGCTTGGAGTGGGATCTGACGGACTGGAAATGGGATGGAGATCTTTTTATTGCGACCCCTCTTCAGCAAAACCCATCTAATTACCAGAGTAGACAGTTTTTCCCCGTTGAAACTGGAAATCTGGCTTCATCCAACAGTTCATCTTCTTGTTCAGATGAAGTAAATCATGGGATGGAGCAACAGAGGAGGGAATTGGAGAAAAGGAGGAGGGTTATTGTGGTCGATGAAGATGATTCTGGCCCTCTTTCGCTGAAGCTTGGTGGACAAGGTGAGCCAGCTGCCGACGCCGGCAGGGAAATGAGTAACTGGGATGGAGCCGCCGGAAAAAGGACTAAATTAGCTGCACCTGCTGCTGCCAGAGCTGTATGTCAGGTTGATGATTGTGGAACGGATCTCAGTAAGGCTAAAGACTACCATAGGCGGCATAAGGTTTGTGAGATGCACTCCAAGGCTAGTAGAGCACTCGTTGGGAATGTTATGCAGCGCTTCTGCCAGCAGTGCAGCAGGTTTCATGCTCTTCAAGAGTTTGATGAAGGAAAACGAAGTTGTCGTAGACGCCTAGCAGGACATAATAAAAGGAGAAGGAAGACACAATCAGAAACTGTAGCTAACAATAATTCGTTGAATGATGGCCAGACTAGTGGTTATTCCTTGATGAGCCTGCTAAAGATACTCTCCAACATGCACTCAAATGGAGCAAACCACACTGAAGATCAGGACCTTTTATCTCATCTACTAAGAAGCCTTGCCAGCCAGGGTCCCACAAATGGGGATAAAAGCTTATCTGGACTTCTACAAGAATCTTCAAACTTGCTGAACAACAGGTCGATTCTTCGAAATCCTGAAATAGCTTCCTTGATCTCAAATGGTTCACAGGCACCTCCTAGACCCAAAGAGCGTCAGTTCACTAATTCGGCAGCTGAGATGCCCCAGAAAAGGCTAGAAGATGCGCGGACTGCTTCTTCTCAAAGTCCAGGCATTTTGTTTCCCATTCAAAGCAATTCTCAAGCTTACACACCAGGCAGGGAAAGTACCACTGGCAGGAGCAAGTTGATTGACTTCGATTTGAATGATGCGTATGTTGATTCAGATGATTGTGGAGACGATATAGATAGATCCCCTGTGCCTGAGTGCCCATCTTGGTTACAACAGGACTCTCACCAGTCGAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCCTCTGCCCAGTCACCTTCCAGTTCCAGTGGTGACAATCAGAACCGTACAGATCGGATTGTTTTTAAACTATTTGGGAAAGGTCCTAGTGATTTTCCATTTGTCGTACGAGCTCAGATTCTTGACTGGCTATCTCACAGTCCAACGGAAATTGAGAGCTACATTAGACCTGGTTGCGTTGTGTTGACAATATATCTGCGGCTTCCTGAGTCTGCATGGGAGGAGCTTTCTTATGATCTAAGCTCCAGTTTGAGTAGGCTTTTGGATGTCCATGGTGGTGATAGCTTCTGGACAAAGGGATGGATTTACATTAGGGTGCAGAACCAAATTGCATTTGTGTGTGATGGGCAGGTTCTGTTGGATATGTCATTGCCTTGTGTTAGTAATGACGGCAGTACACTATTAAGTGTCAGACCCATAGCTGTGCCGGTATCTGACAGAGTTCAATTTTTAGTCAAAGGCTACAATTTAACTAAGCCATCCACGAGATTACTTTGTTCTTTAGAAGGTAACTACCTGGATCCAGAAGCAGATAATGAGGTAGAAGAACAAGTTGCTGGTGGTGACAAGGATGATAAGCTCCAATCCCTAAATTTCACATGTTCTATTCCAGCAGTCGGTGGAAGAGGATTTATTGAGGTTGAAGATCATGGAGTCAGCAATAGCTTCTTCCCATTTATAATTGCAGAGGAGGATGTTTGCTCTGAAATCCGTATGCTTGAGAGTGATCTAGAGTTGACTTCATTGGATTATGTCAAGGGGCAGACAAATAATATTGAAGCAAGAAATCAAGCCATGGATTTTATTCATGAACTTGGTTGGTTGCTTCATAGAAATAATTTGAGGGCTAGATTAGAGCATTTTGGTCCTAATGCTGTTCTCCATCCTTTGAAGCGGTTCAAGTGGCTTGTGGAGTTCTCCGTAGACCATGAGTGGTGTGCAGTAGTTAAGAAACTATTGAACATTCTCCTTGATGGAACTGTGGGTGGAGACGATTCTTCCTTGAAATATGCTCTCACTGAGATGGGGCTTCTGCATAAAGCTGTGCGTAGGAATTCTAGGCCTTTGGTGGAATTGCTTTTAACATATACCCCCACAAATGTAGCAGATGATCTATGTTCTGAATATCAATCTCTGGTTGGGGTCGGTGGGCAATTCTTGTTTAGACCCGACTGTGTAGGGCCTGGAGGTTTGACACCTCTTCATATTGCAGCTGGCATAGATGGATATGAAGATGTGCTAGATGCATTGACAGATGATCCTGGAAAGGTGGCAATTGAAGCGTGGAAGAACACTCGTGATAGCACAGGTTTCACACCAGAAGATTATGCCCGCTTGCGAGGGCATTATTCTTACATTCACCTGGTACAGAGGAAAATTAGCAAGAAAGCGAACAGCGGACATATAGTGGTTGATATTCCTCGCGTTCCGTCTGTCGTTGAGAACAGTAACCAGAAAGATGAAGTGTGTGCAACCACCAGCTTAGAGATATCAATGACTGAGAGAAAAGCCATTCCTCGGCCATGCAGACTTTGTGATAGGAAGCTGGCTTATGGAAGTCGGAGTCGATCTCTACTGTACAGGCCTGCAATGTTCTCAATGGTGGCTATGGCTGCTGTATGTGTTTGTGTTGCTCTCCTCTTCAGGGGCTCACCGGAAGTTCTGTACATTTTCCGTCCATTTAGGTGGGAAATGGTGGACTTTGGAACAAGCTGATTTCACCAGTCAATAAATGTGATAAAAAAAGTATATTAGTTACTTGTACCAGTATTTTCGTCTATATAAAAGAAGACTATATAGGGCCTGATATATGCTGTAGGAATAGCCCTTCAGACACTTCAGTTGTTATACCAACTTTTTTTTAACATATTTATTTTGTTTGATAAAAGTGTATCTTGTCGTTGGGACCTAGTAACTAGGTCCAACTTTCCCTCTTTTATTTAATCTTTATTTACATTTTGGTAATATTGAATTCTGTAAATTAGTTCATTTTATTTGTAAAACTACAATAAGAGAGCTTATGTCATATTTACTCTGCTAAGCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g068100.2.1SL2.50ch01:77195711..77202334995-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g068100.2SL2.50ch01:77195384..772025537,170-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g068100.2.1.1SL2.50ch01:77201760..77202553794-1
exonexon:Solyc01g068100.2.1.10SL2.50ch01:77195384..77196158775-n/a
exonexon:Solyc01g068100.2.1.2SL2.50ch01:77201207..77201388182-2
exonexon:Solyc01g068100.2.1.3SL2.50ch01:77200510..77201063554-n/a
exonexon:Solyc01g068100.2.1.4SL2.50ch01:77199774..7719984875-n/a
exonexon:Solyc01g068100.2.1.5SL2.50ch01:77199523..77199630108-n/a
exonexon:Solyc01g068100.2.1.6SL2.50ch01:77199310..77199430121-2
exonexon:Solyc01g068100.2.1.7SL2.50ch01:77199023..77199164142-1
exonexon:Solyc01g068100.2.1.8SL2.50ch01:77198737..77198887151-n/a
exonexon:Solyc01g068100.2.1.9SL2.50ch01:77196262..77196891630-n/a
intronintron:Solyc01g068100.2.1.10SL2.50ch01:77196159..77196261n/a-n/a
intronintron:Solyc01g068100.2.1.2SL2.50ch01:77201389..77201759n/a-n/a
intronintron:Solyc01g068100.2.1.3SL2.50ch01:77201064..77201206n/a-n/a
intronintron:Solyc01g068100.2.1.4SL2.50ch01:77199849..77200509n/a-n/a
intronintron:Solyc01g068100.2.1.5SL2.50ch01:77199631..77199773n/a-n/a
intronintron:Solyc01g068100.2.1.6SL2.50ch01:77199431..77199522n/a-n/a
intronintron:Solyc01g068100.2.1.7SL2.50ch01:77199165..77199309n/a-n/a
intronintron:Solyc01g068100.2.1.8SL2.50ch01:77198888..77199022n/a-n/a
intronintron:Solyc01g068100.2.1.9SL2.50ch01:77196892..77198736n/a-n/a
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Related viewsNone found
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