Solanum lycopersicum mRNA Solyc01g067720.2.1
 mRNA details
|
| Name | Type |
Length
1,487
|
Organism |
|
Description
Vesicle-associated membrane protein-associated protein (AHRD V1 *-*- Q1ANA7_WHEAT); contains Interpro domain(s) IPR000535 Major sperm protein
|
|
Location(s)
SL2.50ch01:76658306..76663454
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005198
- Length
- 5149
- Nb exon
- 10
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc01g067720.2.1 Vesicle-associated membrane protein-associated protein (AHRD V1 *-*- Q1ANA7_WHEAT); contains Interpro domain(s) IPR000535 Major sperm protein
CAAATTAGCGAATAGCAGTATGGAGCGCTTCGGTAAATCATGATAACTCCGTTAACCGTTCCTAATCCCTTTGGCTTCAAGTCTTCACCATTTTTGCAACTACTTTTCTCCCTTTCTTCCCACTGTTTCAGATCAACTACTATCTCTCTCACTCATTGGCTTTCACCGGAACTGGAGGATTGCGCGATTTCGTCTTCGGAGTTTGAATATCTAATAATGATAAACACACAACTAGTGGAGATTCAACCTTGTGAACTCGAGTTTACATTTGAGGTGAAGAAACAAAGTTCATGTGCAGTTCACATATCTAATATCACAGACCAATATGTAGCTTTCAAGGTCAAGACCACATCACCTAAGAAATACTGTGTCCGGCCTAATATAGGTGTTATCAAACCAAAGTCTACATATGACTTCACAGTTACAATGCAAGCTCAGAGGGCAGCTCCATCTGATATGCAATGCAAGGATAAATTTTTGATTCAGTGCACAGTTGTTCCTTTTGGAACTAATGAAGAGGAAATTCCACCCAGCATGTTCAACAAAGATAATGGAAAATATATTGACGAGTGCAAATTAAAGGTTGTTCTGGTTAGCCCATCCCAGTCTCTAGTTCTGCAGCCAGCTAATGGAATTTCCAAGCAAGGTGCATCTGTTGAGACTTCGATGCAACAGGAAAAATTTCCAAGTGGTGTTGAAAACCTTCCTCCAGCTCAAACTGTGGTTAAGAACAACAAGGATATAAAATTTGAGGAAGAAACAGAGGAACCAAGATTGGTTAACATTGCAGATGTCAAAGATCTGAACTTAACAAAAAATACCAAGTCCAGTATTGGTGAGATTGATGAAACAATATGTCAGGTGGTTGAGAACAACAAGGGTGCAGATTTTGACGCAGAAGAAGAGGAGCCAAGATTGGCTAAGACTGCGGAAGACATCCAGTTGAATTTGCCTAAGAACAGGGAGTCTAATGCCAATGAGGTTGAGGTTGTTAAATCAAGACATCTGAACATGGAGACAAAATTGTCACTATCCAAAGATGTTGAGGAGCTAAAGTCTAAGATAAATTCACTGGGTTCTCAGCTAATTGAGGCTGAATGCATAATTGCAAAGTTAAAAGAACAGAAGCGAAGTACCATCAAAGACATGGAAATTTTGAAGCAAGAACTGGCATTGTTAAAGACAAAGGGTGTTGGAAAAAGAGTTCAAGTTGGTTTTCCCCCGTTATTCCTTTGCATGGTCGCATTGATTTGTCTCACCATTGGATATCTTGTACGTGCTTAACAAGGATTTTGCTTGGCTTTGGTATATTTGTAACTGTTTAGGCACTTACAATGTCTTCAGCATGTTGACAATTGCATCTTTTTTTCTTTTATTATCTGTCAACCTAACGAGTTTTTTTTCAAAATGAGTATGTAAAAGTGGAGTTCATGAGGAAAAAAAATAATATTTCAGTTATGTAATAGTTATGTTTCATTTTTTTTTCT
CAAATTAGCGAATAGCAGTATGGAGCGCTTCGGTAAATCATGATAACTCCGTTAACCGTTCCTAATCCCTTTGGCTTCAAGTCTTCACCATTTTTGCAACTACTTTTCTCCCTTTCTTCCCACTGTTTCAGATCAACTACTATCTCTCTCACTCATTGGCTTTCACCGGAACTGGAGGATTGCGCGATTTCGTCTTCGGAGTTTGAATATCTAATAATGATAAACACACAACTAGTGGAGATTCAACCTTGTGAACTCGAGTTTACATTTGAGGTGAAGAAACAAAGTTCATGTGCAGTTCACATATCTAATATCACAGACCAATATGTAGCTTTCAAGGTCAAGACCACATCACCTAAGAAATACTGTGTCCGGCCTAATATAGGTGTTATCAAACCAAAGTCTACATATGACTTCACAGTTACAATGCAAGCTCAGAGGGCAGCTCCATCTGATATGCAATGCAAGGATAAATTTTTGATTCAGTGCACAGTTGTTCCTTTTGGAACTAATGAAGAGGAAATTCCACCCAGCATGTTCAACAAAGATAATGGAAAATATATTGACGAGTGCAAATTAAAGGTTGTTCTGGTTAGCCCATCCCAGTCTCTAGTTCTGCAGCCAGCTAATGGAATTTCCAAGCAAGGTGCATCTGTTGAGACTTCGATGCAACAGGAAAAATTTCCAAGTGGTGTTGAAAACCTTCCTCCAGCTCAAACTGTGGTTAAGAACAACAAGGATATAAAATTTGAGGAAGAAACAGAGGAACCAAGATTGGTTAACATTGCAGATGTCAAAGATCTGAACTTAACAAAAAATACCAAGTCCAGTATTGGTGAGATTGATGAAACAATATGTCAGGTGGTTGAGAACAACAAGGGTGCAGATTTTGACGCAGAAGAAGAGGAGCCAAGATTGGCTAAGACTGCGGAAGACATCCAGTTGAATTTGCCTAAGAACAGGGAGTCTAATGCCAATGAGGTTGAGGTTGTTAAATCAAGACATCTGAACATGGAGACAAAATTGTCACTATCCAAAGATGTTGAGGAGCTAAAGTCTAAGATAAATTCACTGGGTTCTCAGCTAATTGAGGCTGAATGCATAATTGCAAAGTTAAAAGAACAGAAGCGAAGTACCATCAAAGACATGGAAATTTTGAAGCAAGAACTGGCATTGTTAAAGACAAAGGGTGTTGGAAAAAGAGTTCAAGTTGGTTTTCCCCCGTTATTCCTTTGCATGGTCGCATTGATTTGTCTCACCATTGGATATCTTGTACGTGCTTAACAAGGATTTTGCTTGGCTTTGGTATATTTGTAACTGTTTAGGCACTTACAATGTCTTCAGCATGTTGACAATTGCATCTTTTTTTCTTTTATTATCTGTCAACCTAACGAGTTTTTTTTCAAAATGAGTATGTAAAAGTGGAGTTCATGAGGAAAAAAAATAATATTTCAGTTATGTAATAGTTATGTTTCATTTTTTTTTCT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc01g067720.2.1 | SL2.50ch01:76658508..76663415 | 415 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc01g067720.2 | SL2.50ch01:76658306..76663454 | 5,149 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc01g067720.2.1.1 | SL2.50ch01:76663243..76663454 | 212 | - | 1 |
| exon | exon:Solyc01g067720.2.1.10 | SL2.50ch01:76658306..76658622 | 317 | - | n/a |
| exon | exon:Solyc01g067720.2.1.2 | SL2.50ch01:76662396..76662451 | 56 | - | 2 |
| exon | exon:Solyc01g067720.2.1.3 | SL2.50ch01:76661633..76661703 | 71 | - | n/a |
| exon | exon:Solyc01g067720.2.1.4 | SL2.50ch01:76661433..76661514 | 82 | - | 2 |
| exon | exon:Solyc01g067720.2.1.5 | SL2.50ch01:76660966..76661081 | 116 | - | n/a |
| exon | exon:Solyc01g067720.2.1.6 | SL2.50ch01:76660710..76660892 | 183 | - | n/a |
| exon | exon:Solyc01g067720.2.1.7 | SL2.50ch01:76660275..76660415 | 141 | - | n/a |
| exon | exon:Solyc01g067720.2.1.8 | SL2.50ch01:76659969..76660199 | 231 | - | n/a |
| exon | exon:Solyc01g067720.2.1.9 | SL2.50ch01:76659645..76659722 | 78 | - | n/a |
| intron | intron:Solyc01g067720.2.1.10 | SL2.50ch01:76658623..76659644 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.2 | SL2.50ch01:76662452..76663242 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.3 | SL2.50ch01:76661704..76662395 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.4 | SL2.50ch01:76661515..76661632 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.5 | SL2.50ch01:76661082..76661432 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.6 | SL2.50ch01:76660893..76660965 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.7 | SL2.50ch01:76660416..76660709 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.8 | SL2.50ch01:76660200..76660274 | n/a | - | n/a |
| intron | intron:Solyc01g067720.2.1.9 | SL2.50ch01:76659723..76659968 | n/a | - | n/a |
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